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IVF0004175 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0004175
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionG-patch domain-containing protein
Genome locationchr10:4702296..4705608
RNA-Seq ExpressionIVF0004175
SyntenyIVF0004175
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
InterPro domainsIPR000467 - G-patch domain
IPR039146 - G patch domain and ankyrin repeat-containing protein 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004147099.1 G patch domain and ankyrin repeat-containing protein 1 homolog [Cucumis sativus]3.67e-7795.24Show/hide
Query:  MDLESGPGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLGADKVKKKIKETKDNAASDRKNNQERPPPKKGKGLSKRMRK
        MDLESGPGGSVSAAAIDSSNIGF+LLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLGADKVKKKIKET DNA SDRKNNQERPPPKK KGL+KRMRK
Subjt:  MDLESGPGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLGADKVKKKIKETKDNAASDRKNNQERPPPKKGKGLSKRMRK

Query:  MQEEERLFQEKEFERAFFREFWPENV
        MQEEERLFQEKEFE+AFFREFWPENV
Subjt:  MQEEERLFQEKEFERAFFREFWPENV

XP_008445906.1 PREDICTED: G patch domain and ankyrin repeat-containing protein 1 homolog isoform X2 [Cucumis melo]2.80e-81100Show/hide
Query:  MDLESGPGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLGADKVKKKIKETKDNAASDRKNNQERPPPKKGKGLSKRMRK
        MDLESGPGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLGADKVKKKIKETKDNAASDRKNNQERPPPKKGKGLSKRMRK
Subjt:  MDLESGPGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLGADKVKKKIKETKDNAASDRKNNQERPPPKKGKGLSKRMRK

Query:  MQEEERLFQEKEFERAFFREFWPENV
        MQEEERLFQEKEFERAFFREFWPENV
Subjt:  MQEEERLFQEKEFERAFFREFWPENV

XP_016900186.1 PREDICTED: G patch domain and ankyrin repeat-containing protein 1 homolog isoform X1 [Cucumis melo]3.90e-81100Show/hide
Query:  MDLESGPGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLGADKVKKKIKETKDNAASDRKNNQERPPPKKGKGLSKRMRK
        MDLESGPGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLGADKVKKKIKETKDNAASDRKNNQERPPPKKGKGLSKRMRK
Subjt:  MDLESGPGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLGADKVKKKIKETKDNAASDRKNNQERPPPKKGKGLSKRMRK

Query:  MQEEERLFQEKEFERAFFREFWPENV
        MQEEERLFQEKEFERAFFREFWPENV
Subjt:  MQEEERLFQEKEFERAFFREFWPENV

XP_022945156.1 G patch domain and ankyrin repeat-containing protein 1 homolog [Cucurbita moschata]1.18e-6686.51Show/hide
Query:  MDLESGPGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLGADKVKKKIKETKDNAASDRKNNQERPPPKKGKGLSKRMRK
        MDLESG GGSVSA AIDSSNIGFQLLKKHGWREGTGLG+SEQGRLEPVQ SVKNNKRGLGADKVKKK+KET D AASD KN QERPP KK K +SK+MRK
Subjt:  MDLESGPGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLGADKVKKKIKETKDNAASDRKNNQERPPPKKGKGLSKRMRK

Query:  MQEEERLFQEKEFERAFFREFWPENV
        M EEERLF+EKEFERAFFREFWP+NV
Subjt:  MQEEERLFQEKEFERAFFREFWPENV

XP_038891672.1 protein PXR1 [Benincasa hispida]3.02e-6789.68Show/hide
Query:  MDLESGPGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLGADKVKKKIKETKDNAASDRKNNQERPPPKKGKGLSKRMRK
        MDLE G GGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVSEQGRLEPVQAS+KNNKRGLGADKVKKK+KET D AASDRKNNQ      K KGLSKRMRK
Subjt:  MDLESGPGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLGADKVKKKIKETKDNAASDRKNNQERPPPKKGKGLSKRMRK

Query:  MQEEERLFQEKEFERAFFREFWPENV
        MQEEERLFQEKEFERAFFREFWPENV
Subjt:  MQEEERLFQEKEFERAFFREFWPENV

TrEMBL top hitse value%identityAlignment
A0A0A0KPR8 G-patch domain-containing protein1.5e-5795.24Show/hide
Query:  MDLESGPGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLGADKVKKKIKETKDNAASDRKNNQERPPPKKGKGLSKRMRK
        MDLESGPGGSVSAAAIDSSNIGF+LLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLGADKVKKKIKET DNA SDRKNNQERPPPKK KGL+KRMRK
Subjt:  MDLESGPGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLGADKVKKKIKETKDNAASDRKNNQERPPPKKGKGLSKRMRK

Query:  MQEEERLFQEKEFERAFFREFWPENV
        MQEEERLFQEKEFE+AFFREFWPENV
Subjt:  MQEEERLFQEKEFERAFFREFWPENV

A0A1S3BEH2 G patch domain and ankyrin repeat-containing protein 1 homolog isoform X21.1e-60100Show/hide
Query:  MDLESGPGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLGADKVKKKIKETKDNAASDRKNNQERPPPKKGKGLSKRMRK
        MDLESGPGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLGADKVKKKIKETKDNAASDRKNNQERPPPKKGKGLSKRMRK
Subjt:  MDLESGPGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLGADKVKKKIKETKDNAASDRKNNQERPPPKKGKGLSKRMRK

Query:  MQEEERLFQEKEFERAFFREFWPENV
        MQEEERLFQEKEFERAFFREFWPENV
Subjt:  MQEEERLFQEKEFERAFFREFWPENV

A0A1S4DW19 G patch domain and ankyrin repeat-containing protein 1 homolog isoform X11.1e-60100Show/hide
Query:  MDLESGPGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLGADKVKKKIKETKDNAASDRKNNQERPPPKKGKGLSKRMRK
        MDLESGPGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLGADKVKKKIKETKDNAASDRKNNQERPPPKKGKGLSKRMRK
Subjt:  MDLESGPGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLGADKVKKKIKETKDNAASDRKNNQERPPPKKGKGLSKRMRK

Query:  MQEEERLFQEKEFERAFFREFWPENV
        MQEEERLFQEKEFERAFFREFWPENV
Subjt:  MQEEERLFQEKEFERAFFREFWPENV

A0A6J1CAQ8 G patch domain and ankyrin repeat-containing protein 1 homolog7.4e-4984.92Show/hide
Query:  MDLESGPGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLGADKVKKKIKETKDNAASDRKNNQERPPPKKGKGLSKRMRK
        M+ ES  GG+VSA AIDSSNIGFQLLKKHGWREGTGLGVSEQGRLEPVQ SVKNNKRGLGADKVKKK+KET D AASDRKNNQE PP KK K LSK  RK
Subjt:  MDLESGPGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLGADKVKKKIKETKDNAASDRKNNQERPPPKKGKGLSKRMRK

Query:  MQEEERLFQEKEFERAFFREFWPENV
        MQEE+R+FQEKEFERAFFREFWP+NV
Subjt:  MQEEERLFQEKEFERAFFREFWPENV

A0A6J1G054 G patch domain and ankyrin repeat-containing protein 1 homolog2.0e-4986.51Show/hide
Query:  MDLESGPGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLGADKVKKKIKETKDNAASDRKNNQERPPPKKGKGLSKRMRK
        MDLESG GGSVSA AIDSSNIGFQLLKKHGWREGTGLG+SEQGRLEPVQ SVKNNKRGLGADKVKKK+KET D AASD K NQERPP KK K +SK+MRK
Subjt:  MDLESGPGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLGADKVKKKIKETKDNAASDRKNNQERPPPKKGKGLSKRMRK

Query:  MQEEERLFQEKEFERAFFREFWPENV
        M EEERLF+EKEFERAFFREFWP+NV
Subjt:  MQEEERLFQEKEFERAFFREFWPENV

SwissProt top hitse value%identityAlignment
A0JMV4 RNA-binding protein 5-A5.8e-0652.17Show/hide
Query:  IDSSNIGFQLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLGA
        ID+SNIG ++L+  GW+EG+GLG   QG   P+QA V+    GLGA
Subjt:  IDSSNIGFQLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLGA

A2A6A1 G patch domain-containing protein 82.6e-0653.33Show/hide
Query:  IDSSNIGFQLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLG
        I+S NIG +LL+KHGW+ G GLG S QGR +P+   VK +  G+G
Subjt:  IDSSNIGFQLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLG

Q6C233 Protein SQS14.0e-0757.14Show/hide
Query:  AAAIDSSNIGFQLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLGA
        A AID SNIG  LL+K GW  G GLG   +G  EP+ A VK +KRG+GA
Subjt:  AAAIDSSNIGFQLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLGA

Q6DDU9 RNA-binding protein 5-B5.8e-0652.17Show/hide
Query:  IDSSNIGFQLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLGA
        ID+SNIG ++L+  GW+EG+GLG   QG   P+QA V+    GLGA
Subjt:  IDSSNIGFQLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLGA

Q9UKJ3 G patch domain-containing protein 82.6e-0653.33Show/hide
Query:  IDSSNIGFQLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLG
        I+S NIG +LL+KHGW+ G GLG S QGR +P+   VK +  G+G
Subjt:  IDSSNIGFQLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLG

Arabidopsis top hitse value%identityAlignment
AT3G52350.1 D111/G-patch domain-containing protein3.3e-2556.52Show/hide
Query:  AAAIDSSNIGFQLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLGADK-VKKKIKETKDNAASDRKNNQERPPPKKGKGLSKRMRKMQEEERLFQEK
        + AI SSNIGFQLLKKHGW+EGTGLG++EQG L P+QA  K+NK+GLGA+K  K+K  + +D A  +          KK K LSK++ KM E E+   E 
Subjt:  AAAIDSSNIGFQLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLGADK-VKKKIKETKDNAASDRKNNQERPPPKKGKGLSKRMRKMQEEERLFQEK

Query:  EFERAFFREFWPENV
        EFERAF REFWP+NV
Subjt:  EFERAFFREFWPENV

AT3G54230.1 suppressor of abi3-55.3e-0747.06Show/hide
Query:  AIDSSNIGFQLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLGADKVK
        AID SN+G ++L+  GW EG+GLG    G  EPVQA   + + GLG+ + K
Subjt:  AIDSSNIGFQLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLGADKVK

AT3G54230.2 suppressor of abi3-55.3e-0747.06Show/hide
Query:  AIDSSNIGFQLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLGADKVK
        AID SN+G ++L+  GW EG+GLG    G  EPVQA   + + GLG+ + K
Subjt:  AIDSSNIGFQLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLGADKVK

AT5G08535.1 D111/G-patch domain-containing protein2.9e-2959.84Show/hide
Query:  GGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLGADK-VKKKI--KETKDNAASDRKNNQERPPPKKGKGLSKRMRKMQEE
        G S S AAI+SSNIGFQLLKKHGW+EGTGLG++EQG L P+QA  K+NKRG+GA +  K+K+   + KD   S           K+ K LSK+MRKM E 
Subjt:  GGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLGADK-VKKKI--KETKDNAASDRKNNQERPPPKKGKGLSKRMRKMQEE

Query:  ERLFQEKEFERAFFREFWPENV
        E+  QEKEFERAFFREFWP+NV
Subjt:  ERLFQEKEFERAFFREFWPENV

AT5G08535.2 D111/G-patch domain-containing protein2.9e-2959.84Show/hide
Query:  GGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLGADK-VKKKI--KETKDNAASDRKNNQERPPPKKGKGLSKRMRKMQEE
        G S S AAI+SSNIGFQLLKKHGW+EGTGLG++EQG L P+QA  K+NKRG+GA +  K+K+   + KD   S           K+ K LSK+MRKM E 
Subjt:  GGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLGADK-VKKKI--KETKDNAASDRKNNQERPPPKKGKGLSKRMRKMQEE

Query:  ERLFQEKEFERAFFREFWPENV
        E+  QEKEFERAFFREFWP+NV
Subjt:  ERLFQEKEFERAFFREFWPENV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTTGGAGTCGGGCCCAGGGGGTTCTGTTTCTGCTGCAGCCATTGATTCTTCGAACATAGGGTTTCAGCTTTTGAAAAAGCATGGTTGGAGGGAAGGAACGGGCCT
TGGAGTTTCTGAGCAGGGTAGGTTGGAGCCCGTACAGGCGTCTGTGAAGAATAATAAACGAGGCTTGGGAGCAGATAAAGTGAAGAAGAAGATTAAAGAAACTAAAGATA
ATGCAGCCTCAGATAGAAAAAATAACCAGGAACGTCCTCCTCCAAAGAAAGGGAAGGGGCTATCGAAAAGGATGAGGAAGATGCAAGAGGAAGAGAGGCTATTTCAAGAG
AAGGAATTTGAACGAGCATTTTTTAGGGAATTTTGGCCAGAAAATGTTTGA
mRNA sequenceShow/hide mRNA sequence
GAGAAAACTTACCACCTCAACGGAAATCTAAAAAAGATTCAAAATTCCCCATTTGCACGGTGGCATCCGTTCTTCAGAATCGACAAAAAAAAGTTAAACTCCACACCCTA
GGGCTAGGCGAAAGTGCGAAAGTTCTGCAAATTTCGAATTGGGTTCAGTCTTTGTAAACAAATAGTTGTATCGGAATTATCTCCATTGGGACTCAAGATTACCCACAAGT
CATTTTTCAGGAGGAATAATGGATTTGGAGTCGGGCCCAGGGGGTTCTGTTTCTGCTGCAGCCATTGATTCTTCGAACATAGGGTTTCAGCTTTTGAAAAAGCATGGTTG
GAGGGAAGGAACGGGCCTTGGAGTTTCTGAGCAGGGTAGGTTGGAGCCCGTACAGGCGTCTGTGAAGAATAATAAACGAGGCTTGGGAGCAGATAAAGTGAAGAAGAAGA
TTAAAGAAACTAAAGATAATGCAGCCTCAGATAGAAAAAATAACCAGGAACGTCCTCCTCCAAAGAAAGGGAAGGGGCTATCGAAAAGGATGAGGAAGATGCAAGAGGAA
GAGAGGCTATTTCAAGAGAAGGAATTTGAACGAGCATTTTTTAGGGAATTTTGGCCAGAAAATGTTTGATACATTAACTCCACATATCTAAATTCAGATTGTTTCTCTAA
AGCGTTAGCATTCACCATTTAGAGTCTGTAAATATGATTACACCAAACAATGTTGTAAAATTTAATTTTGTTCACTGTGAGC
Protein sequenceShow/hide protein sequence
MDLESGPGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLGADKVKKKIKETKDNAASDRKNNQERPPPKKGKGLSKRMRKMQEEERLFQE
KEFERAFFREFWPENV