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IVF0004187 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0004187
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRPM1-interacting protein 4-like
Genome locationchr10:3703462..3704527
RNA-Seq ExpressionIVF0004187
SyntenyIVF0004187
Gene Ontology termsGO:0005886 - plasma membrane (cellular component)
InterPro domainsIPR008700 - RIN4, pathogenic type III effector avirulence factor Avr cleavage site
IPR040387 - RPM1-interacting protein 4/NOI4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034227.1 RPM1-interacting protein 4-like [Cucumis melo var. makuwa]1.32e-46100Show/hide
Query:  MTSAQKGPFLPKFGDWDEKNPAAAEGFTVIFNRARDNKKNGGGAGTPNNVIPPQNRTQKQEPAKEIKQKQKYPRKQ
        MTSAQKGPFLPKFGDWDEKNPAAAEGFTVIFNRARDNKKNGGGAGTPNNVIPPQNRTQKQEPAKEIKQKQKYPRKQ
Subjt:  MTSAQKGPFLPKFGDWDEKNPAAAEGFTVIFNRARDNKKNGGGAGTPNNVIPPQNRTQKQEPAKEIKQKQKYPRKQ

XP_004135294.1 protein NOI4 [Cucumis sativus]8.92e-3886.84Show/hide
Query:  MTSAQKGPFLPKFGDWDEKNPAAAEGFTVIFNRARDNKKNGGGAGTPNNVIPPQNRTQKQEPAKEIKQKQKYPRKQ
        M SAQKGPFLPKFGDWDE+NPAAAEGFTVIFNRARDNKKNGG AGTPNNVIPPQN++QK EPAK+  QK KYPRKQ
Subjt:  MTSAQKGPFLPKFGDWDEKNPAAAEGFTVIFNRARDNKKNGGGAGTPNNVIPPQNRTQKQEPAKEIKQKQKYPRKQ

XP_008446098.1 PREDICTED: RPM1-interacting protein 4-like [Cucumis melo]6.56e-47100Show/hide
Query:  MTSAQKGPFLPKFGDWDEKNPAAAEGFTVIFNRARDNKKNGGGAGTPNNVIPPQNRTQKQEPAKEIKQKQKYPRKQ
        MTSAQKGPFLPKFGDWDEKNPAAAEGFTVIFNRARDNKKNGGGAGTPNNVIPPQNRTQKQEPAKEIKQKQKYPRKQ
Subjt:  MTSAQKGPFLPKFGDWDEKNPAAAEGFTVIFNRARDNKKNGGGAGTPNNVIPPQNRTQKQEPAKEIKQKQKYPRKQ

XP_038892913.1 protein NOI4-like isoform X1 [Benincasa hispida]1.30e-2873.68Show/hide
Query:  AQKGPFLPKFGDWDEKNPAAAEGFTVIFNRARDNKKNGGGAGTPNNVIPPQNRTQKQEPAKEIKQKQ---KYPRKQ
        A KGPFLPKFG+WDEKNPAAAEGFTVIF+RARDNKKNGGG GTPNNVIP QN+ Q Q    E  +K    +YPRKQ
Subjt:  AQKGPFLPKFGDWDEKNPAAAEGFTVIFNRARDNKKNGGGAGTPNNVIPPQNRTQKQEPAKEIKQKQ---KYPRKQ

XP_038892914.1 protein NOI4-like isoform X2 [Benincasa hispida]2.95e-2773.97Show/hide
Query:  GPFLPKFGDWDEKNPAAAEGFTVIFNRARDNKKNGGGAGTPNNVIPPQNRTQKQEPAKEIKQKQ---KYPRKQ
        GPFLPKFG+WDEKNPAAAEGFTVIF+RARDNKKNGGG GTPNNVIP QN+ Q Q    E  +K    +YPRKQ
Subjt:  GPFLPKFGDWDEKNPAAAEGFTVIFNRARDNKKNGGGAGTPNNVIPPQNRTQKQEPAKEIKQKQ---KYPRKQ

TrEMBL top hitse value%identityAlignment
A0A0A0KTF9 AvrRpt-cleavage domain-containing protein2.8e-2886.84Show/hide
Query:  MTSAQKGPFLPKFGDWDEKNPAAAEGFTVIFNRARDNKKNGGGAGTPNNVIPPQNRTQKQEPAKEIKQKQKYPRKQ
        M SAQKGPFLPKFGDWDE+NPAAAEGFTVIFNRARDNKKNGG AGTPNNVIPPQN++QK EPAK+  QK KYPRKQ
Subjt:  MTSAQKGPFLPKFGDWDEKNPAAAEGFTVIFNRARDNKKNGGGAGTPNNVIPPQNRTQKQEPAKEIKQKQKYPRKQ

A0A1S3BEY0 RPM1-interacting protein 4-like3.1e-35100Show/hide
Query:  MTSAQKGPFLPKFGDWDEKNPAAAEGFTVIFNRARDNKKNGGGAGTPNNVIPPQNRTQKQEPAKEIKQKQKYPRKQ
        MTSAQKGPFLPKFGDWDEKNPAAAEGFTVIFNRARDNKKNGGGAGTPNNVIPPQNRTQKQEPAKEIKQKQKYPRKQ
Subjt:  MTSAQKGPFLPKFGDWDEKNPAAAEGFTVIFNRARDNKKNGGGAGTPNNVIPPQNRTQKQEPAKEIKQKQKYPRKQ

A0A5D3CUX8 RPM1-interacting protein 4-like3.1e-35100Show/hide
Query:  MTSAQKGPFLPKFGDWDEKNPAAAEGFTVIFNRARDNKKNGGGAGTPNNVIPPQNRTQKQEPAKEIKQKQKYPRKQ
        MTSAQKGPFLPKFGDWDEKNPAAAEGFTVIFNRARDNKKNGGGAGTPNNVIPPQNRTQKQEPAKEIKQKQKYPRKQ
Subjt:  MTSAQKGPFLPKFGDWDEKNPAAAEGFTVIFNRARDNKKNGGGAGTPNNVIPPQNRTQKQEPAKEIKQKQKYPRKQ

A0A6J1DEH9 RPM1-interacting protein 4-like3.4e-1355.13Show/hide
Query:  MTSAQKGPFLPKFGDWDEKNPAAAEGFTVIFNRARDNKKNGGGAGTPNNVIPPQNRTQKQEPAKEIKQKQKYPRKQVW
        M S   G  LPKFG+WD K+PA+AEGFT+IFN+ARDNKKNGGG  T   VI  + + QK E +K+   K ++PRK+ W
Subjt:  MTSAQKGPFLPKFGDWDEKNPAAAEGFTVIFNRARDNKKNGGGAGTPNNVIPPQNRTQKQEPAKEIKQKQKYPRKQVW

A0A6J1G0L7 RPM1-interacting protein 4-like1.7e-1767.07Show/hide
Query:  MTSAQKGPFLPKFGDWDEKNPAAAEGFTVIFNRARDNKKNGGGAGTPNNVIPPQNRTQKQ------EPAKEIKQKQKYPRKQ
        MTSA +G  LPKFG+WDEK+PAAAEGFTVIF+RARD KKNG   GTPNNVIP +N+ Q Q      E AK+  QKQKYPRK+
Subjt:  MTSAQKGPFLPKFGDWDEKNPAAAEGFTVIFNRARDNKKNGGGAGTPNNVIPPQNRTQKQ------EPAKEIKQKQKYPRKQ

SwissProt top hitse value%identityAlignment
O22633 Protein NOI42.2e-0942.5Show/hide
Query:  AQKGPFLPKFGDWDEKNPAAAEGFTVIFNRARDNKKNGGGAGTPNNVIPPQNRTQKQEPAKEIKQKQKYPRKQVWFSSVQ
        + KG  LPKFG+WD  +PA+AEGFTVIFN+ARD KK GG  G+P        ++   +P+K        P+ + W   +Q
Subjt:  AQKGPFLPKFGDWDEKNPAAAEGFTVIFNRARDNKKNGGGAGTPNNVIPPQNRTQKQEPAKEIKQKQKYPRKQVWFSSVQ

Q8GYN5 RPM1-interacting protein 45.0e-0645.1Show/hide
Query:  SAQKGPFLPKFGDWDEKNPAAAEGFTVIFNRARDNKKNG----GGAGTPNN
        S +K   +PKFGDWDE NP++A+G+T IFN+ R+ + +G    G + TP +
Subjt:  SAQKGPFLPKFGDWDEKNPAAAEGFTVIFNRARDNKKNG----GGAGTPNN

Arabidopsis top hitse value%identityAlignment
AT2G04410.1 RPM1-interacting protein 4 (RIN4) family protein1.5e-1050Show/hide
Query:  AQKGPFLPKFGDWDEKNPAAAEGFTVIFNRARDNKKNGGGAGTPNNVIPPQNRTQK--QEPAKE
        A KG  LPKFG+WD  +P++AEGFTVIFN+AR+ KK GG + +P    P  N+  +  ++PAK+
Subjt:  AQKGPFLPKFGDWDEKNPAAAEGFTVIFNRARDNKKNGGGAGTPNNVIPPQNRTQK--QEPAKE

AT5G55850.1 RPM1-interacting protein 4 (RIN4) family protein1.2e-1050.82Show/hide
Query:  AQKGPFLPKFGDWDEKNPAAAEGFTVIFNRARDNKKNGGGAGTPNNVIPPQNRTQKQEPAK
        + KG  LPKFG+WD  +PA+AEGFTVIFN+ARD KK GG  G+P        ++   +P+K
Subjt:  AQKGPFLPKFGDWDEKNPAAAEGFTVIFNRARDNKKNGGGAGTPNNVIPPQNRTQKQEPAK

AT5G55850.2 RPM1-interacting protein 4 (RIN4) family protein1.5e-1052.54Show/hide
Query:  KGPFLPKFGDWDEKNPAAAEGFTVIFNRARDNKKNGGGAGTPNNVIPPQNRTQKQEPAK
        KG  LPKFG+WD  +PA+AEGFTVIFN+ARD KK GG  G+P        ++   +P+K
Subjt:  KGPFLPKFGDWDEKNPAAAEGFTVIFNRARDNKKNGGGAGTPNNVIPPQNRTQKQEPAK

AT5G55850.3 RPM1-interacting protein 4 (RIN4) family protein2.0e-1043.59Show/hide
Query:  KGPFLPKFGDWDEKNPAAAEGFTVIFNRARDNKKNGGGAGTPNNVIPPQNRTQKQEPAKEIKQKQKYPRKQVWFSSVQ
        KG  LPKFG+WD  +PA+AEGFTVIFN+ARD KK GG  G+P        ++   +P+K        P+ + W   +Q
Subjt:  KGPFLPKFGDWDEKNPAAAEGFTVIFNRARDNKKNGGGAGTPNNVIPPQNRTQKQEPAKEIKQKQKYPRKQVWFSSVQ

AT5G63270.1 RPM1-interacting protein 4 (RIN4) family protein7.7e-1047.37Show/hide
Query:  KGPFLPKFGDWDEKNPAAAEGFTVIFNRARDNK--KNGGGAGTPNNVIPPQNRTQKQEPAKEIKQKQKYPRKQVWF
        KG  LPKFG+WD  NPA+AEGFTVIF++A D K  K   GAG PN+++ PQ      +      Q  K   K  WF
Subjt:  KGPFLPKFGDWDEKNPAAAEGFTVIFNRARDNK--KNGGGAGTPNNVIPPQNRTQKQEPAKEIKQKQKYPRKQVWF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTTCAGCTCAAAAGGGTCCATTTCTGCCTAAATTTGGTGATTGGGATGAAAAGAATCCTGCTGCTGCTGAAGGGTTTACGGTGATTTTCAACAGGGCAAGGGATAA
TAAGAAGAATGGTGGAGGAGCTGGAACTCCTAATAACGTGATACCACCCCAAAACCGAACTCAAAAGCAAGAACCTGCTAAGGAGATCAAGCAGAAGCAGAAGTATCCAA
GAAAGCAGGTCTGGTTTAGTTCTGTCCAGTTCTCTTTTGCTTTGCACCTCTCTTCTTCCTCGTTATGTTTTAAAAACCTCTCTAAAATCCTAATTAAAGAAGCACTCTCT
TAA
mRNA sequenceShow/hide mRNA sequence
GTATAGTTTATATAATACTTTGTGTTTATAAATTGAATGTCCACTCGGCCATCGTTATTGAGCCGCCATTTTTGAGGCCTTTGAAACTCTCTGACGCGTTGAACATAGCC
CAATCCTCTATAAGAAACCCCAAATTTCATCTTCTTCTTCAACCCACAACTCCTTGTTCTTCTTCTCCTTCATCAGCTCAAGTACTCTTTGAATTACCCATTTCCTCAAA
ACTGCAACTTTCTTCAATTATGACTTCAGCTCAAAAGGGTCCATTTCTGCCTAAATTTGGTGATTGGGATGAAAAGAATCCTGCTGCTGCTGAAGGGTTTACGGTGATTT
TCAACAGGGCAAGGGATAATAAGAAGAATGGTGGAGGAGCTGGAACTCCTAATAACGTGATACCACCCCAAAACCGAACTCAAAAGCAAGAACCTGCTAAGGAGATCAAG
CAGAAGCAGAAGTATCCAAGAAAGCAGGTCTGGTTTAGTTCTGTCCAGTTCTCTTTTGCTTTGCACCTCTCTTCTTCCTCGTTATGTTTTAAAAACCTCTCTAAAATCCT
AATTAAAGAAGCACTCTCTTAAAACATTATGATCTATGGACTTTAAACTGGAATGAATGAAAATCAAAGACATAATCTGGGTTCTTGAAGTTCATTACTATTTTAGTATC
TTGTGAAAACCAAA
Protein sequenceShow/hide protein sequence
MTSAQKGPFLPKFGDWDEKNPAAAEGFTVIFNRARDNKKNGGGAGTPNNVIPPQNRTQKQEPAKEIKQKQKYPRKQVWFSSVQFSFALHLSSSSLCFKNLSKILIKEALS