; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0004217 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0004217
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptionnuclear pore complex protein NUP54
Genome locationchr10:3888538..3893430
RNA-Seq ExpressionIVF0004217
SyntenyIVF0004217
Gene Ontology termsGO:0006607 - NLS-bearing protein import into nucleus (biological process)
GO:0006999 - nuclear pore organization (biological process)
GO:0036228 - protein localization to nuclear inner membrane (biological process)
GO:0044613 - nuclear pore central transport channel (cellular component)
GO:0017056 - structural constituent of nuclear pore (molecular function)
InterPro domainsIPR024864 - Nucleoporin Nup54/Nup57/Nup44
IPR025712 - Nucleoporin Nup54, alpha-helical domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573649.1 Nuclear pore complex protein NUP54, partial [Cucurbita argyrosperma subsp. sororia]3.32e-23790.72Show/hide
Query:  FGAQTSSSAFGTPQSTPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSLFSTPFSSQPSQQQQQLQQSTLFPQSSATG
        FG   S+ AFGTPQSTPAFGTPQSTPAFGTPASTPAFGTPSASPAFGN SSTPAFGTPS+SSFATGFGSSLFSTPFSSQPSQ QQQ QQS LF   +ATG
Subjt:  FGAQTSSSAFGTPQSTPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSLFSTPFSSQPSQQQQQLQQSTLFPQSSATG

Query:  FGFQTPFAAPQSTPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPPGVSDIMWAEAMAKLEGMESADRERLW
        FGFQTPFAAPQS+PFPNAQLTTQMAPVAPLPFS+ADRDIQAIVEAYKDDAGNPKYAFK LLFSVTDPQYRAKP GVSDIMWAEAMAKLEGMESADRERLW
Subjt:  FGFQTPFAAPQSTPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPPGVSDIMWAEAMAKLEGMESADRERLW

Query:  PQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVVKGEAELAEKLALITRQ
        PQLVQGFKDLSQRLKIQDEVILSD+ERLRMTQSNVK LQRHFLADTLPW+QRLKQKEQGLQRRLLR+MR+VEALESKGCRVP++ GEAELAE+LALITRQ
Subjt:  PQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVVKGEAELAEKLALITRQ

Query:  LKGSGAELSKRVQNLLTITRGQANGSGPGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDAS
        L+GSGAELS+RV+NLLTIT GQANGSG GNSIYLQGS KIHEQSLADMQEVLQQQTEAIARLG VLKRDVRDMEIIMAEDKEM DD S
Subjt:  LKGSGAELSKRVQNLLTITRGQANGSGPGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDAS

XP_004135312.1 nuclear pore complex protein NUP54 [Cucumis sativus]1.95e-25797.17Show/hide
Query:  MFGAQTSSSAFGTPQSTPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSLFSTPFSSQPSQQQQQLQQSTLFPQSSAT
        MFGAQ SSSAFGTPQS+PAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSLFSTPFSSQPSQQQQQLQQS +FPQSSAT
Subjt:  MFGAQTSSSAFGTPQSTPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSLFSTPFSSQPSQQQQQLQQSTLFPQSSAT

Query:  GFGFQTPFAAPQSTPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPPGVSDIMWAEAMAKLEGMESADRERL
        GFGFQTPF APQSTPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYR KPPGVSDIMWAEAMAKLEGMESADRERL
Subjt:  GFGFQTPFAAPQSTPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPPGVSDIMWAEAMAKLEGMESADRERL

Query:  WPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVVKGEAELAEKLALITR
        WPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQR LLRVMRIVEALESKGCRVPV+KGEAELAEKLALITR
Subjt:  WPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVVKGEAELAEKLALITR

Query:  QLKGSGAELSKRVQNLLTITRGQANGSGPGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDAS
        QLKGSGAELS+RVQNLLT+TRGQANGSGPGNSIY QGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDAS
Subjt:  QLKGSGAELSKRVQNLLTITRGQANGSGPGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDAS

XP_008446043.1 PREDICTED: nuclear pore complex protein NUP54 [Cucumis melo]7.76e-264100Show/hide
Query:  MFGAQTSSSAFGTPQSTPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSLFSTPFSSQPSQQQQQLQQSTLFPQSSAT
        MFGAQTSSSAFGTPQSTPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSLFSTPFSSQPSQQQQQLQQSTLFPQSSAT
Subjt:  MFGAQTSSSAFGTPQSTPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSLFSTPFSSQPSQQQQQLQQSTLFPQSSAT

Query:  GFGFQTPFAAPQSTPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPPGVSDIMWAEAMAKLEGMESADRERL
        GFGFQTPFAAPQSTPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPPGVSDIMWAEAMAKLEGMESADRERL
Subjt:  GFGFQTPFAAPQSTPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPPGVSDIMWAEAMAKLEGMESADRERL

Query:  WPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVVKGEAELAEKLALITR
        WPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVVKGEAELAEKLALITR
Subjt:  WPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVVKGEAELAEKLALITR

Query:  QLKGSGAELSKRVQNLLTITRGQANGSGPGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDAS
        QLKGSGAELSKRVQNLLTITRGQANGSGPGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDAS
Subjt:  QLKGSGAELSKRVQNLLTITRGQANGSGPGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDAS

XP_023515339.1 nuclear pore complex protein NUP54-like [Cucurbita pepo subsp. pepo]6.58e-23792.01Show/hide
Query:  FGAQTSSSAFGTPQSTPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSLFSTPFSSQPSQQQQQLQQSTLFPQSSATG
        FG   S+ AFGTPQSTPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLS TPAFGTPSTSSFATGFGSSLFSTPFSSQP QQQQQ QQS LF Q  ATG
Subjt:  FGAQTSSSAFGTPQSTPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSLFSTPFSSQPSQQQQQLQQSTLFPQSSATG

Query:  FGFQTPFAAPQSTPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPPGVSDIMWAEAMAKLEGMESADRERLW
        FGFQTPFAAPQS+PFPNAQL TQMAPVAPLPF LADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKP GVSD MWAEAMAKLEGMESADRERLW
Subjt:  FGFQTPFAAPQSTPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPPGVSDIMWAEAMAKLEGMESADRERLW

Query:  PQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVVKGEAELAEKLALITRQ
        PQLVQGFKDLSQRLKIQDEVIL+D+ERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPV+KGEAELAEKL+LITRQ
Subjt:  PQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVVKGEAELAEKLALITRQ

Query:  LKGSGAELSKRVQNLLTITRGQANGSGPGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDAS
         K SGAELS+RVQNLL ITRGQ NGSG GNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLG VLKRDVRDMEIIMAED EM DD S
Subjt:  LKGSGAELSKRVQNLLTITRGQANGSGPGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDAS

XP_038893426.1 nuclear pore complex protein NUP54 [Benincasa hispida]1.79e-25396.4Show/hide
Query:  MFGAQTSSSAFGTPQSTPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSLFSTPFSSQPSQQQQQLQQSTLFPQSSAT
        MFGAQ SSSAFGTPQSTPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSLFSTPFSSQPSQ QQQLQQS LFPQ +AT
Subjt:  MFGAQTSSSAFGTPQSTPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSLFSTPFSSQPSQQQQQLQQSTLFPQSSAT

Query:  GFGFQTPFAAPQSTPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPPGVSDIMWAEAMAKLEGMESADRERL
        GFGFQTPFAAPQSTPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYR KP GVSDIMWAEAMAKLEGMESADRERL
Subjt:  GFGFQTPFAAPQSTPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPPGVSDIMWAEAMAKLEGMESADRERL

Query:  WPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVVKGEAELAEKLALITR
        WPQLVQGFKDLSQRLKIQDEVILSDS+RLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPV+KGEAELAEKLALITR
Subjt:  WPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVVKGEAELAEKLALITR

Query:  QLKGSGAELSKRVQNLLTITRGQANGSGPGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDAS
        QLKGSGAELS+RVQNLLTITRGQANGS  GNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAED+EM DDAS
Subjt:  QLKGSGAELSKRVQNLLTITRGQANGSGPGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDAS

TrEMBL top hitse value%identityAlignment
A0A0A0KPW8 Nup54 domain-containing protein4.0e-20297.17Show/hide
Query:  MFGAQTSSSAFGTPQSTPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSLFSTPFSSQPSQQQQQLQQSTLFPQSSAT
        MFGAQ SSSAFGTPQS+PAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSLFSTPFSSQPSQQQQQLQQS +FPQSSAT
Subjt:  MFGAQTSSSAFGTPQSTPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSLFSTPFSSQPSQQQQQLQQSTLFPQSSAT

Query:  GFGFQTPFAAPQSTPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPPGVSDIMWAEAMAKLEGMESADRERL
        GFGFQTPF APQSTPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYR KPPGVSDIMWAEAMAKLEGMESADRERL
Subjt:  GFGFQTPFAAPQSTPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPPGVSDIMWAEAMAKLEGMESADRERL

Query:  WPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVVKGEAELAEKLALITR
        WPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQR LLRVMRIVEALESKGCRVPV+KGEAELAEKLALITR
Subjt:  WPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVVKGEAELAEKLALITR

Query:  QLKGSGAELSKRVQNLLTITRGQANGSGPGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDAS
        QLKGSGAELS+RVQNLLT+TRGQANGSGPGNSIY QGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDAS
Subjt:  QLKGSGAELSKRVQNLLTITRGQANGSGPGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDAS

A0A1S3BE47 nuclear pore complex protein NUP545.4e-207100Show/hide
Query:  MFGAQTSSSAFGTPQSTPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSLFSTPFSSQPSQQQQQLQQSTLFPQSSAT
        MFGAQTSSSAFGTPQSTPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSLFSTPFSSQPSQQQQQLQQSTLFPQSSAT
Subjt:  MFGAQTSSSAFGTPQSTPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSLFSTPFSSQPSQQQQQLQQSTLFPQSSAT

Query:  GFGFQTPFAAPQSTPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPPGVSDIMWAEAMAKLEGMESADRERL
        GFGFQTPFAAPQSTPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPPGVSDIMWAEAMAKLEGMESADRERL
Subjt:  GFGFQTPFAAPQSTPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPPGVSDIMWAEAMAKLEGMESADRERL

Query:  WPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVVKGEAELAEKLALITR
        WPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVVKGEAELAEKLALITR
Subjt:  WPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVVKGEAELAEKLALITR

Query:  QLKGSGAELSKRVQNLLTITRGQANGSGPGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDAS
        QLKGSGAELSKRVQNLLTITRGQANGSGPGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDAS
Subjt:  QLKGSGAELSKRVQNLLTITRGQANGSGPGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDAS

A0A5A7SSX4 Nuclear pore complex protein NUP545.4e-207100Show/hide
Query:  MFGAQTSSSAFGTPQSTPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSLFSTPFSSQPSQQQQQLQQSTLFPQSSAT
        MFGAQTSSSAFGTPQSTPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSLFSTPFSSQPSQQQQQLQQSTLFPQSSAT
Subjt:  MFGAQTSSSAFGTPQSTPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSLFSTPFSSQPSQQQQQLQQSTLFPQSSAT

Query:  GFGFQTPFAAPQSTPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPPGVSDIMWAEAMAKLEGMESADRERL
        GFGFQTPFAAPQSTPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPPGVSDIMWAEAMAKLEGMESADRERL
Subjt:  GFGFQTPFAAPQSTPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPPGVSDIMWAEAMAKLEGMESADRERL

Query:  WPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVVKGEAELAEKLALITR
        WPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVVKGEAELAEKLALITR
Subjt:  WPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVVKGEAELAEKLALITR

Query:  QLKGSGAELSKRVQNLLTITRGQANGSGPGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDAS
        QLKGSGAELSKRVQNLLTITRGQANGSGPGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDAS
Subjt:  QLKGSGAELSKRVQNLLTITRGQANGSGPGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDAS

A0A6J1DDY9 nuclear pore complex protein NUP545.3e-18691.52Show/hide
Query:  MFGAQTSSSAFGTPQSTPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSLFSTPFSSQPSQQQQQLQQSTLFPQSSAT
        MFGAQ SSS         AFGTPQSTPAFGTP+STPAFGTPSASPAFGNLSSTPAFGTPSTS+F TGFGSSLFSTPFSSQPSQQ QQ QQS LF Q  AT
Subjt:  MFGAQTSSSAFGTPQSTPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSLFSTPFSSQPSQQQQQLQQSTLFPQSSAT

Query:  GFGFQTPFAAPQSTPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPPGVSDIMWAEAMAKLEGMESADRERL
        GFGFQTPFAAPQSTPFPNAQLTTQMAPVAPLPFS+ADRDIQAIVEAYKD+AGNPKYAFKHLLFSVTDPQ+RAKP GVSDIMWAEAM KLEGMESADRERL
Subjt:  GFGFQTPFAAPQSTPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPPGVSDIMWAEAMAKLEGMESADRERL

Query:  WPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVVKGEAELAEKLALITR
        WPQLVQGFKDLSQRLKIQDEVILSD+ERLRMTQSNVKMLQRHFLADTLPWVQRL+QKEQGLQRRLLRVMRIVEALESKGCRVPV+KGEAELAEKLALITR
Subjt:  WPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVVKGEAELAEKLALITR

Query:  QLKGSGAELSKRVQNLLTITRGQANGSGPGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDAS
        QLKGSGAELS+RVQNLLT TRGQANGS  GNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLG VLKRDVRDMEIIMAEDKEM DDAS
Subjt:  QLKGSGAELSKRVQNLLTITRGQANGSGPGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDAS

A0A6J1G105 nuclear pore complex protein NUP543.4e-18590.46Show/hide
Query:  FGAQTSSSAFGTPQSTPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSLFSTPFSSQPSQQQQQLQQSTLFPQSSATG
        FG   S+ AFGTPQSTPAFGTPQSTPAFGTP STPAFGTPSASPAFGN SSTPAFGTPS+SSFATGFGSSLFSTPFSSQPSQQQQ  QQS LF   +ATG
Subjt:  FGAQTSSSAFGTPQSTPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSLFSTPFSSQPSQQQQQLQQSTLFPQSSATG

Query:  FGFQTPFAAPQSTPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPPGVSDIMWAEAMAKLEGMESADRERLW
        FGFQTPFAAPQS+PFPNAQLTTQMAPVAPLPFS+ADRDIQAIVEAYKDDAGNPKYAFK LLFSVTDPQYRAKP GVSDIMWAEAMAKLEGMESADRERLW
Subjt:  FGFQTPFAAPQSTPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPPGVSDIMWAEAMAKLEGMESADRERLW

Query:  PQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVVKGEAELAEKLALITRQ
        PQLVQGFKDLSQRLKIQDEVILSD+ERLRMTQSNVK LQRHFLADTLPW+QRLKQKEQGLQRRLLR+MR+VEALESKGCRVP++ GEAELAE+LALITRQ
Subjt:  PQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVVKGEAELAEKLALITRQ

Query:  LKGSGAELSKRVQNLLTITRGQANGSGPGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDAS
        L+GSGAELS+RV+NLLTIT GQANGSG GNSIYLQGS KIHEQSLADMQEVLQQQTEAIARLG VLKRDVRDMEIIMAEDKEM DD S
Subjt:  LKGSGAELSKRVQNLLTITRGQANGSGPGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDAS

SwissProt top hitse value%identityAlignment
P70582 Nuclear pore complex protein Nup544.2e-0725.98Show/hide
Query:  PPGVSDIMWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVE
        P GV  I+W +A      +++ D E+L P  + GFK+L +RLK+QD++      RL +   ++  LQ++    T+  + + K+K   L  R L+V+   E
Subjt:  PPGVSDIMWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVE

Query:  ALESKGCRVPVVKGEAELAEKLALITRQLKGSGAELSKRVQNLLTITRGQANGSGPGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRD
             G  +     E +L  +L  I  +L  +  +   R+  L++  R Q N  G   ++  +    I    L ++++ L+QQ E ++ L +++K D+ D
Subjt:  ALESKGCRVPVVKGEAELAEKLALITRQLKGSGAELSKRVQNLLTITRGQANGSGPGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRD

Query:  MEII
        ++++
Subjt:  MEII

Q7Z3B4 Nucleoporin p541.6e-0625.49Show/hide
Query:  PPGVSDIMWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVE
        P GV  I+W +A      +++ D E+L P  + GFK+L +RLK+QD++      RL +   ++  LQ++    ++  + + K+K   L  R L+V+   E
Subjt:  PPGVSDIMWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVE

Query:  ALESKGCRVPVVKGEAELAEKLALITRQLKGSGAELSKRVQNLLTITRGQANGSGPGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRD
             G  +     E +L  +L  I  +L  +  +   R+  L++  R Q N  G   ++  +    I    L ++++ L+QQ E ++ L +++K D+ D
Subjt:  ALESKGCRVPVVKGEAELAEKLALITRQLKGSGAELSKRVQNLLTITRGQANGSGPGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRD

Query:  MEII
        ++++
Subjt:  MEII

Q8BTS4 Nuclear pore complex protein Nup544.2e-0725.98Show/hide
Query:  PPGVSDIMWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVE
        P GV  I+W +A      +++ D E+L P  + GFK+L +RLK+QD++      RL +   ++  LQ++    T+  + + K+K   L  R L+V+   E
Subjt:  PPGVSDIMWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVE

Query:  ALESKGCRVPVVKGEAELAEKLALITRQLKGSGAELSKRVQNLLTITRGQANGSGPGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRD
             G  +     E +L  +L  I  +L  +  +   R+  L++  R Q N  G   ++  +    I    L ++++ L+QQ E ++ L +++K D+ D
Subjt:  ALESKGCRVPVVKGEAELAEKLALITRQLKGSGAELSKRVQNLLTITRGQANGSGPGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRD

Query:  MEII
        ++++
Subjt:  MEII

Q8GYF7 Nuclear pore complex protein NUP542.5e-14071.43Show/hide
Query:  FGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFAT-GFGSSLFSTPFSSQPSQQQQQLQQ----STLFPQSSATGFGFQTPF----AA
        FGTP S+P+FGTP+STPAFGT  +SPAFG  S+TPAFGTPS  SF++ GFGSSLFS+PFSSQ  QQQQQ QQ    S+LF Q  ++ FGFQ+PF      
Subjt:  FGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFAT-GFGSSLFSTPFSSQPSQQQQQLQQ----STLFPQSSATGFGFQTPF----AA

Query:  PQSTPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPPGVSDIMWAEAMAKLEGMESADRERLWPQLVQGFKD
         Q TPFPNAQLTTQMAPVAP+P+SLADRD+QAI+EAYK+D  NPKYAF+HLLFSVT+PQYR KP  VSDIMWAEAM+KLEGM+S +RERLWPQLVQGFKD
Subjt:  PQSTPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPPGVSDIMWAEAMAKLEGMESADRERLWPQLVQGFKD

Query:  LSQRLKIQDEVILSDSERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVVKGEAELAEKLALITRQLKGSGAELS
        LSQRLK+QDEV++SD +R++ TQSNVKMLQRH  A T P ++RL+QKEQ LQRR+LRVMRI+E LE KG R+P+ KGEAEL+EKL  ITRQ+KG GAELS
Subjt:  LSQRLKIQDEVILSDSERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVVKGEAELAEKLALITRQLKGSGAELS

Query:  KRVQNLLTITRGQANGSGPGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDA
        +RVQ+L TI+R QAN    G+S+YL GS KI EQSL DMQEVLQQ+TEAI RLGNVLKRD+RDMEI++AED EMA D+
Subjt:  KRVQNLLTITRGQANGSGPGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDA

Q9VDV3 Nuclear pore complex protein Nup581.8e-1041.61Show/hide
Query:  FGA-QTSSSAFGTPQSTPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSLFSTPFSSQPSQQQQQLQQSTLFPQSSAT
        FGA  T++ AFGT  +TPAFG P +T AFG PA+TPAFG  +A+PAFG  ++TPAFG P+ +S    FG+   +T F +  S Q            + A 
Subjt:  FGA-QTSSSAFGTPQSTPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSLFSTPFSSQPSQQQQQLQQSTLFPQSSAT

Query:  GFGFQTP-FAAPQSTPFPNAQLTTQMAPVAPLPFSLA
         F F TP  +AP + P      TT     A +P SL+
Subjt:  GFGFQTP-FAAPQSTPFPNAQLTTQMAPVAPLPFSLA

Arabidopsis top hitse value%identityAlignment
AT1G24310.1 unknown protein1.8e-14171.43Show/hide
Query:  FGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFAT-GFGSSLFSTPFSSQPSQQQQQLQQ----STLFPQSSATGFGFQTPF----AA
        FGTP S+P+FGTP+STPAFGT  +SPAFG  S+TPAFGTPS  SF++ GFGSSLFS+PFSSQ  QQQQQ QQ    S+LF Q  ++ FGFQ+PF      
Subjt:  FGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFAT-GFGSSLFSTPFSSQPSQQQQQLQQ----STLFPQSSATGFGFQTPF----AA

Query:  PQSTPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPPGVSDIMWAEAMAKLEGMESADRERLWPQLVQGFKD
         Q TPFPNAQLTTQMAPVAP+P+SLADRD+QAI+EAYK+D  NPKYAF+HLLFSVT+PQYR KP  VSDIMWAEAM+KLEGM+S +RERLWPQLVQGFKD
Subjt:  PQSTPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPPGVSDIMWAEAMAKLEGMESADRERLWPQLVQGFKD

Query:  LSQRLKIQDEVILSDSERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVVKGEAELAEKLALITRQLKGSGAELS
        LSQRLK+QDEV++SD +R++ TQSNVKMLQRH  A T P ++RL+QKEQ LQRR+LRVMRI+E LE KG R+P+ KGEAEL+EKL  ITRQ+KG GAELS
Subjt:  LSQRLKIQDEVILSDSERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVVKGEAELAEKLALITRQLKGSGAELS

Query:  KRVQNLLTITRGQANGSGPGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDA
        +RVQ+L TI+R QAN    G+S+YL GS KI EQSL DMQEVLQQ+TEAI RLGNVLKRD+RDMEI++AED EMA D+
Subjt:  KRVQNLLTITRGQANGSGPGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCGGAGCTCAAACGTCCTCCTCCGCCTTCGGCACTCCACAATCAACTCCGGCATTTGGCACTCCTCAATCAACTCCGGCATTTGGCACACCGGCGTCCACTCCTGC
CTTTGGAACTCCATCGGCGTCTCCTGCATTTGGCAATCTTTCCTCGACTCCTGCCTTCGGAACTCCATCTACGTCGTCGTTTGCTACCGGCTTCGGCTCCTCTCTTTTCT
CTACTCCATTCTCTTCTCAGCCTTCACAACAGCAGCAGCAGTTGCAGCAATCGACGCTGTTTCCGCAATCATCCGCTACAGGATTCGGTTTCCAGACTCCGTTTGCAGCG
CCTCAGTCCACTCCATTTCCAAATGCTCAACTGACCACTCAGATGGCCCCGGTCGCACCGCTTCCTTTCTCCCTGGCAGATCGAGATATTCAAGCAATTGTTGAGGCTTA
CAAGGACGACGCAGGAAACCCTAAGTATGCTTTCAAGCATTTGTTGTTCAGTGTAACTGATCCTCAGTATAGGGCGAAGCCTCCTGGTGTATCGGATATAATGTGGGCTG
AGGCAATGGCAAAGCTCGAAGGCATGGAAAGTGCTGATAGAGAGCGATTGTGGCCGCAGCTTGTTCAAGGTTTTAAGGATTTATCTCAGCGCTTGAAGATTCAAGATGAA
GTCATTCTCTCTGATTCTGAGAGACTACGCATGACCCAAAGCAATGTCAAAATGCTTCAGAGGCATTTTTTAGCCGATACTCTACCTTGGGTACAAAGATTGAAACAGAA
GGAGCAAGGTCTGCAAAGGCGTCTTTTGAGAGTTATGAGAATTGTGGAGGCACTAGAAAGTAAAGGTTGCCGAGTGCCTGTAGTGAAAGGAGAGGCTGAATTGGCAGAGA
AGTTAGCTTTGATAACGAGGCAGTTGAAGGGCTCTGGGGCAGAACTTTCAAAGAGGGTGCAAAATTTGCTTACAATTACTCGCGGTCAAGCCAATGGCTCTGGTCCTGGT
AATTCCATCTATCTTCAAGGATCCGCAAAAATACATGAACAGAGTCTTGCCGATATGCAGGAGGTTTTACAGCAGCAGACGGAGGCCATTGCTAGACTTGGAAATGTTTT
GAAGCGAGATGTTAGAGACATGGAAATCATAATGGCTGAAGATAAAGAGATGGCAGATGATGCAAGTTAA
mRNA sequenceShow/hide mRNA sequence
CTTTATACTTTTAGTTTTTAAATTTGCAACAAGCCGATTATGAACAAATTCTCACACTCATATCTATAAAAACTAAATTATTACAAATTTTAAATTGAAAGAATTAAATA
GTGACGTCCTAAATTAAAATTAAAAAATGAAGAATAGAGTGTTAGAAAACAATGTTAATGGACGACTCGCGCTGTTTCTTTCCTCTAAAAATGAAGTCCCAAATGTTTAA
TATAAATTGAAAAGGGGACGGGTCGGGTTGTTCGTATTTATTAATTTTAAAAACAATTCCCAAATAATTCGCGGCAAAAGGATTGGATGCCCTAGACTTCCTTCTTCCTT
AAACCCCAACATTGAAAATTCGAGGGAAGCTTCATCTCGTCAAGAACGAGTTCGAGTCTCGAATGGCAATTTCGGTTTGAGACGTTAGGGTTTCTCTTCGATCCTCCATT
GCAAATACAATGTTCGGAGCTCAAACGTCCTCCTCCGCCTTCGGCACTCCACAATCAACTCCGGCATTTGGCACTCCTCAATCAACTCCGGCATTTGGCACACCGGCGTC
CACTCCTGCCTTTGGAACTCCATCGGCGTCTCCTGCATTTGGCAATCTTTCCTCGACTCCTGCCTTCGGAACTCCATCTACGTCGTCGTTTGCTACCGGCTTCGGCTCCT
CTCTTTTCTCTACTCCATTCTCTTCTCAGCCTTCACAACAGCAGCAGCAGTTGCAGCAATCGACGCTGTTTCCGCAATCATCCGCTACAGGATTCGGTTTCCAGACTCCG
TTTGCAGCGCCTCAGTCCACTCCATTTCCAAATGCTCAACTGACCACTCAGATGGCCCCGGTCGCACCGCTTCCTTTCTCCCTGGCAGATCGAGATATTCAAGCAATTGT
TGAGGCTTACAAGGACGACGCAGGAAACCCTAAGTATGCTTTCAAGCATTTGTTGTTCAGTGTAACTGATCCTCAGTATAGGGCGAAGCCTCCTGGTGTATCGGATATAA
TGTGGGCTGAGGCAATGGCAAAGCTCGAAGGCATGGAAAGTGCTGATAGAGAGCGATTGTGGCCGCAGCTTGTTCAAGGTTTTAAGGATTTATCTCAGCGCTTGAAGATT
CAAGATGAAGTCATTCTCTCTGATTCTGAGAGACTACGCATGACCCAAAGCAATGTCAAAATGCTTCAGAGGCATTTTTTAGCCGATACTCTACCTTGGGTACAAAGATT
GAAACAGAAGGAGCAAGGTCTGCAAAGGCGTCTTTTGAGAGTTATGAGAATTGTGGAGGCACTAGAAAGTAAAGGTTGCCGAGTGCCTGTAGTGAAAGGAGAGGCTGAAT
TGGCAGAGAAGTTAGCTTTGATAACGAGGCAGTTGAAGGGCTCTGGGGCAGAACTTTCAAAGAGGGTGCAAAATTTGCTTACAATTACTCGCGGTCAAGCCAATGGCTCT
GGTCCTGGTAATTCCATCTATCTTCAAGGATCCGCAAAAATACATGAACAGAGTCTTGCCGATATGCAGGAGGTTTTACAGCAGCAGACGGAGGCCATTGCTAGACTTGG
AAATGTTTTGAAGCGAGATGTTAGAGACATGGAAATCATAATGGCTGAAGATAAAGAGATGGCAGATGATGCAAGTTAAAAGAAATTGAGTTCCCATTTCTAGCCATTCT
TCTCTGGAGTGTCGTTATCAAAGTGTACTCGGCTTGATTATTCCGAATGGAAAAATTAAAATTCGTTTTCAATAGACTTTTAATGTACTGCTCAAGTGTTTAAAGGCTGA
GAACTGTAGTGGCCCTTAAAGTACTCAGCATCACCTTGCAAGGCCTTGGATTCATCTTTCCCTTGTCAGGTGCGTGAGGTGGCCTCTCCCACTTTAAAATCTTACCATTT
GGGGATGTTACGTCTCTTATTCTAAAAGCTTTTAAAGGGGAAAATGGGTTGCGTATAGTATGTAGTTGTTAGGTG
Protein sequenceShow/hide protein sequence
MFGAQTSSSAFGTPQSTPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPSTSSFATGFGSSLFSTPFSSQPSQQQQQLQQSTLFPQSSATGFGFQTPFAA
PQSTPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPPGVSDIMWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKIQDE
VILSDSERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVVKGEAELAEKLALITRQLKGSGAELSKRVQNLLTITRGQANGSGPG
NSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDAS