CuGenDBv2

Gene ID	IVF0004248
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	small acidic protein 1
Genome location	chr05:6510982..6511783
RNA-Seq Expression	IVF0004248
Synteny	IVF0004248
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004147176.1 small acidic protein 1 [Cucumis sativus]

2.17e-33

98.39

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Query:  MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDVN
        MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSD+N
Subjt:  MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDVN

XP_008460713.1 PREDICTED: small acidic protein 1 [Cucumis melo]

1.53e-33

100

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Query:  MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDVN
        MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDVN
Subjt:  MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDVN

XP_022964281.1 small acidic protein 1 [Cucurbita moschata]

7.30e-32

93.55

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Query:  MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDVN
        MR +PMEFFAE+EEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSD+N
Subjt:  MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDVN

XP_023513491.1 small acidic protein 1 [Cucurbita pepo subsp. pepo]

2.10e-31

91.94

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Query:  MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDVN
        MR +PMEFFAE+EEQGSTVAMDVDDVDPLEILGEGVISAENKLAD+DFFNSFEDDFDDSD+N
Subjt:  MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDVN

XP_038875245.1 small acidic protein 1 [Benincasa hispida]

3.61e-32

95.16

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Query:  MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDVN
        MR +PMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSD+N
Subjt:  MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDVN

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LNK1 Uncharacterized protein

3.1e-24

98.39

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Query:  MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDVN
        MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSD+N
Subjt:  MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDVN

A0A1S3CCM1 small acidic protein 1

2.4e-24

100

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Query:  MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDVN
        MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDVN
Subjt:  MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDVN

A0A5A7SMJ5 Small acidic protein 1

2.4e-24

100

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Query:  MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDVN
        MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDVN
Subjt:  MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDVN

A0A6J1HIH2 small acidic protein 1

4.5e-23

93.55

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Query:  MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDVN
        MR +PMEFFAE+EEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSD+N
Subjt:  MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDVN

A0A6J1KE12 small acidic protein 1

4.5e-23

93.55

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Query:  MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDVN
        MR +PMEFFAE+EEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSD+N
Subjt:  MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDVN

SwissProt top hits

e value

%identity

Alignment

Q1ECS0 Small acidic protein 2

2.0e-04

43.55

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Query:  EFFAELEEQGSTVAM----DVDDVDPLEILGE--GVISAENKLADADFFNSFEDDFDDSDVN
        +F  E+E  G ++ M    D DD  P+++  E  G+   + K  D+DFFN FEDDFDDSD+N
Subjt:  EFFAELEEQGSTVAM----DVDDVDPLEILGE--GVISAENKLADADFFNSFEDDFDDSDVN

Q9T0H2 Small acidic protein 1

1.4e-13

54.84

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Query:  MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDVN
        MR   ++  +E+++ GS++AMDVDD++ +EIL EG + ++NKLADADFFN F+DDFDD+D+N
Subjt:  MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDVN

Arabidopsis top hits

e value

%identity

Alignment

AT3G24280.1 small acidic protein 2

1.4e-05

43.55

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Query:  EFFAELEEQGSTVAM----DVDDVDPLEILGE--GVISAENKLADADFFNSFEDDFDDSDVN
        +F  E+E  G ++ M    D DD  P+++  E  G+   + K  D+DFFN FEDDFDDSD+N
Subjt:  EFFAELEEQGSTVAM----DVDDVDPLEILGE--GVISAENKLADADFFNSFEDDFDDSDVN

AT4G13520.1 small acidic protein 1

1.0e-14

54.84

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Query:  MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDVN
        MR   ++  +E+++ GS++AMDVDD++ +EIL EG + ++NKLADADFFN F+DDFDD+D+N
Subjt:  MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDVN

Sequences

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CDS sequence

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ATGAGATCTTCACCGATGGAGTTCTTTGCGGAGCTGGAAGAACAGGGATCCACGGTCGCCATGGACGTCGACGATGTAGACCCACTTGAGATATTGGGCGAGGGTGTGAT
CTCCGCCGAGAACAAGCTCGCCGACGCCGATTTCTTCAACTCCTTCGAGGATGATTTTGATGACTCTGACGTCAACTGA

mRNA sequence

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AGGACAAGAGTGAAAATTTACCACAAGAAGTTGGTTGTAATATAGATTTTAGAAATGAGTCATTATAGAACTTGTTTTAATATTTAGGTTACTTTATCAAGGTTTCTTCT
CAAATTCCCATTCGGCCAAGTTACAAATTCAAACAAGTCTATTTGGTTTCCATTGTTCATTTGGTTGCCACGGAGATGAGATCTTCACCGATGGAGTTCTTTGCGGAGCT
GGAAGAACAGGGATCCACGGTCGCCATGGACGTCGACGATGTAGACCCACTTGAGATATTGGGCGAGGGTGTGATCTCCGCCGAGAACAAGCTCGCCGACGCCGATTTCT
TCAACTCCTTCGAGGATGATTTTGATGACTCTGACGTCAACTGAGATTCTTTTTCGTGGTTTCCTTCAAAACAAGTAGTTAATTTCCCAATTCTATGTTCTTACTTCTCT
TGATCAAACAAAGTTGATAGATCCTACCATGCCCTAGTTTGTTTCAGTCTTTAGGGATTTCACTGGTTTGCTTGGTGATAAGTTGAATACTTTTAACATGTTTTACTTTC
TGAATTACTTGATTGGTTATCCCATAGTTTCTTTTCTCTCAAGCGTGGTGGTTAGCCTTGTAATTGTCATTAGTTGCAACGAAAAAGGGGAATGTGTTTATATATAACAG
AAAATGTGAGAAACTGTGTACTTTGTTGCCACATAATTTTAGAGTGATTTTGAAATAGTTAAAATCTCTTCTTTCATTGTCATCGAAAACATTCAAAACCAGTATAATGT
TCGATTTTACCCTCTTAAATACAATTTTCATA

Protein sequence

Show/hide protein sequence

MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDVN

IVF0004248 (gene) of Melon (IVF77) v1 genome