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IVF0004275 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0004275
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionEKC/KEOPS complex, subunit Pcc1
Genome locationchr06:2067686..2069626
RNA-Seq ExpressionIVF0004275
SyntenyIVF0004275
Gene Ontology termsGO:0070525 - tRNA threonylcarbamoyladenosine metabolic process (biological process)
GO:0000408 - EKC/KEOPS complex (cellular component)
InterPro domainsIPR015419 - CTAG/Pcc1 family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004146228.1 uncharacterized protein LOC101217139 [Cucumis sativus]3.16e-5489.9Show/hide
Query:  MTPTASVASDGEAKWEFSCDFEVDYESEKKASIVYNALIVDKELQPDKVKRAMSISNGKLSIHFEAVEARFLRASFSSFVDVLTLATKTIEDFGLEVEF
        MTPTASVAS GE KWEFSCDFEVDYESEKKASIVY AL+VDKELQPDKVKRAMS S+GKLSIHFEAVEARFLRASFS+FVDVLTLATKTIEDFG E +F
Subjt:  MTPTASVASDGEAKWEFSCDFEVDYESEKKASIVYNALIVDKELQPDKVKRAMSISNGKLSIHFEAVEARFLRASFSSFVDVLTLATKTIEDFGLEVEF
XP_008466840.1 PREDICTED: uncharacterized protein LOC103504146 [Cucumis melo]1.06e-61100Show/hide
Query:  MTPTASVASDGEAKWEFSCDFEVDYESEKKASIVYNALIVDKELQPDKVKRAMSISNGKLSIHFEAVEARFLRASFSSFVDVLTLATKTIEDFGLEVEF
        MTPTASVASDGEAKWEFSCDFEVDYESEKKASIVYNALIVDKELQPDKVKRAMSISNGKLSIHFEAVEARFLRASFSSFVDVLTLATKTIEDFGLEVEF
Subjt:  MTPTASVASDGEAKWEFSCDFEVDYESEKKASIVYNALIVDKELQPDKVKRAMSISNGKLSIHFEAVEARFLRASFSSFVDVLTLATKTIEDFGLEVEF
XP_022141079.1 uncharacterized protein LOC111011564 [Momordica charantia]7.62e-5390.43Show/hide
Query:  MTPTASVASDGEAKWEFSCDFEVDYESEKKASIVYNALIVDKELQPDKVKRAMSISNGKLSIHFEAVEARFLRASFSSFVDVLTLATKTIEDFG
        M PTASVASDGEAKWEF CDFEVDYESEKKASIVYNAL VDKELQPDKVKR M++S+GKLS+HFEAVEARFLRASFS+FVDVLTLATKTIEDFG
Subjt:  MTPTASVASDGEAKWEFSCDFEVDYESEKKASIVYNALIVDKELQPDKVKRAMSISNGKLSIHFEAVEARFLRASFSSFVDVLTLATKTIEDFG
XP_023553191.1 uncharacterized protein LOC111810678 [Cucurbita pepo subsp. pepo]2.14e-5285.86Show/hide
Query:  MTPTASVASDGEAKWEFSCDFEVDYESEKKASIVYNALIVDKELQPDKVKRAMSISNGKLSIHFEAVEARFLRASFSSFVDVLTLATKTIEDFGLEVEF
        M PT SVASDGE  WEFSCDFEVDYESEKKASIVY AL+VDKELQPDKVKR M++S+GKLSIHFEAVEARFLRASFS+FVDVLTLATKTIEDFG  V+F
Subjt:  MTPTASVASDGEAKWEFSCDFEVDYESEKKASIVYNALIVDKELQPDKVKRAMSISNGKLSIHFEAVEARFLRASFSSFVDVLTLATKTIEDFGLEVEF
XP_038895564.1 uncharacterized protein LOC120083771 [Benincasa hispida]1.98e-5791.92Show/hide
Query:  MTPTASVASDGEAKWEFSCDFEVDYESEKKASIVYNALIVDKELQPDKVKRAMSISNGKLSIHFEAVEARFLRASFSSFVDVLTLATKTIEDFGLEVEF
        M PTASVASDGEAKWEFSCDFEVDYESEKKASIVYNALIVDKELQPDKVKR MS+S+GKLSIHFEAVEARFLRASFS+FVDVLTLATKT+EDFG EV+F
Subjt:  MTPTASVASDGEAKWEFSCDFEVDYESEKKASIVYNALIVDKELQPDKVKRAMSISNGKLSIHFEAVEARFLRASFSSFVDVLTLATKTIEDFGLEVEF
TrEMBL top hitse value%identityAlignment
A0A0A0L7A2 Uncharacterized protein3.8e-4089.9Show/hide
Query:  MTPTASVASDGEAKWEFSCDFEVDYESEKKASIVYNALIVDKELQPDKVKRAMSISNGKLSIHFEAVEARFLRASFSSFVDVLTLATKTIEDFGLEVEF
        MTPTASVAS GE KWEFSCDFEVDYESEKKASIVY AL+VDKELQPDKVKRAMS S+GKLSIHFEAVEARFLRASFS+FVDVLTLATKTIEDFG E +F
Subjt:  MTPTASVASDGEAKWEFSCDFEVDYESEKKASIVYNALIVDKELQPDKVKRAMSISNGKLSIHFEAVEARFLRASFSSFVDVLTLATKTIEDFGLEVEF
A0A1S3CTG0 uncharacterized protein LOC1035041467.9e-46100Show/hide
Query:  MTPTASVASDGEAKWEFSCDFEVDYESEKKASIVYNALIVDKELQPDKVKRAMSISNGKLSIHFEAVEARFLRASFSSFVDVLTLATKTIEDFGLEVEF
        MTPTASVASDGEAKWEFSCDFEVDYESEKKASIVYNALIVDKELQPDKVKRAMSISNGKLSIHFEAVEARFLRASFSSFVDVLTLATKTIEDFGLEVEF
Subjt:  MTPTASVASDGEAKWEFSCDFEVDYESEKKASIVYNALIVDKELQPDKVKRAMSISNGKLSIHFEAVEARFLRASFSSFVDVLTLATKTIEDFGLEVEF
A0A5D3CJ23 EKC/KEOPS complex, subunit Pcc17.9e-46100Show/hide
Query:  MTPTASVASDGEAKWEFSCDFEVDYESEKKASIVYNALIVDKELQPDKVKRAMSISNGKLSIHFEAVEARFLRASFSSFVDVLTLATKTIEDFGLEVEF
        MTPTASVASDGEAKWEFSCDFEVDYESEKKASIVYNALIVDKELQPDKVKRAMSISNGKLSIHFEAVEARFLRASFSSFVDVLTLATKTIEDFGLEVEF
Subjt:  MTPTASVASDGEAKWEFSCDFEVDYESEKKASIVYNALIVDKELQPDKVKRAMSISNGKLSIHFEAVEARFLRASFSSFVDVLTLATKTIEDFGLEVEF
A0A6J1CHJ5 uncharacterized protein LOC1110115642.5e-3990.43Show/hide
Query:  MTPTASVASDGEAKWEFSCDFEVDYESEKKASIVYNALIVDKELQPDKVKRAMSISNGKLSIHFEAVEARFLRASFSSFVDVLTLATKTIEDFG
        M PTASVASDGEAKWEF CDFEVDYESEKKASIVYNAL VDKELQPDKVKR M++S+GKLS+HFEAVEARFLRASFS+FVDVLTLATKTIEDFG
Subjt:  MTPTASVASDGEAKWEFSCDFEVDYESEKKASIVYNALIVDKELQPDKVKRAMSISNGKLSIHFEAVEARFLRASFSSFVDVLTLATKTIEDFG
A0A6J1G2C3 uncharacterized protein LOC1114500281.4e-3781.82Show/hide
Query:  MTPTASVASDGEAKWEFSCDFEVDYESEKKASIVYNALIVDKELQPDKVKRAMSISNGKLSIHFEAVEARFLRASFSSFVDVLTLATKTIEDFGLEVEF
        M PTASV SDG+AKWEFSCDFEVD ESEKKASIVYNAL+VDKELQPDKVKR M++S+GKLS+HFEAVEARFLRAS+S+F+DVLTLA KTIEDFG  ++F
Subjt:  MTPTASVASDGEAKWEFSCDFEVDYESEKKASIVYNALIVDKELQPDKVKRAMSISNGKLSIHFEAVEARFLRASFSSFVDVLTLATKTIEDFGLEVEF
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G53045.1 unknown protein1.1e-2861.7Show/hide
Query:  MTPTASVASDGEAKWEFSCDFEVDYESEKKASIVYNALIVDKELQPDKVKRAMSISNGKLSIHFEAVEARFLRASFSSFVDVLTLATKTIEDFG
        M  T    +  +  W+FSC+ +V +ESE+ A I Y +L VDKELQPDKV+R MS+SN KLS+HFEA+EAR LRASFS+FVDVLTLAT+TI++FG
Subjt:  MTPTASVASDGEAKWEFSCDFEVDYESEKKASIVYNALIVDKELQPDKVKRAMSISNGKLSIHFEAVEARFLRASFSSFVDVLTLATKTIEDFG

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTCCGACAGCTTCCGTCGCTTCTGATGGAGAGGCCAAATGGGAATTCAGCTGTGACTTTGAAGTCGATTATGAGTCTGAGAAGAAAGCTTCAATTGTCTATAACGC
TTTAATCGTCGATAAAGAGTTACAGCCAGACAAGGTGAAAAGGGCGATGTCAATTTCTAATGGAAAACTTTCAATACACTTTGAGGCAGTGGAAGCAAGGTTTTTGCGTG
CATCATTCAGTTCGTTTGTAGATGTGCTTACTCTTGCCACAAAAACAATCGAAGATTTCGGACTCGAAGTGGAATTCTGA
mRNA sequenceShow/hide mRNA sequence
TTATAATCGACCTACATAAACAAAATAATTTTAACAATTTTATCATTTACCCCTCACTCTAACAAAACTAAAGGAATAAACCCTAAAATCATTCTCTCACATCCGACTCA
GTCATCTTCGTTTTTTCAACGAGTCACGGTCTCAACTTCTTCCCATTTCTTCCACTCCCTCGCCGCCCACCATCCTCCCCCCGCTTCTGACTTGCCGCTGCCGTTGCCGG
TCAGTTTCAAAGCGCTCTTCATGCTCGTCAAACCCTTCCATAAACTCAACCTTCTCTGTATTCTTATCTTTACTTCATAGGTTATTTGAGGGAAAATCTGGCTGTTTTTC
ATTAGAATTTAAGCAATGACTCCGACAGCTTCCGTCGCTTCTGATGGAGAGGCCAAATGGGAATTCAGCTGTGACTTTGAAGTCGATTATGAGTCTGAGAAGAAAGCTTC
AATTGTCTATAACGCTTTAATCGTCGATAAAGAGTTACAGCCAGACAAGGTGAAAAGGGCGATGTCAATTTCTAATGGAAAACTTTCAATACACTTTGAGGCAGTGGAAG
CAAGGTTTTTGCGTGCATCATTCAGTTCGTTTGTAGATGTGCTTACTCTTGCCACAAAAACAATCGAAGATTTCGGACTCGAAGTGGAATTCTGATAGCCTTACTGACCT
ATTTACATGGCTCTCAAATATATATGCAGTGTCATTTATTTCCTTAAAGAAGCTCCGATTTTAATTTACATCTGACCTGTAATTTTATCACAATGTTTTGTCATTGTTTG
ATCGAGTGTGACGCTCTTTCTCCGCCCATCATTCGAGCATTGAGATCTAACAAGATAAACATTTTCAGTAACAAATTGTCCTTTATTACTCCTTACAGTCAACCATATAA
CTACTTGAT
Protein sequenceShow/hide protein sequence
MTPTASVASDGEAKWEFSCDFEVDYESEKKASIVYNALIVDKELQPDKVKRAMSISNGKLSIHFEAVEARFLRASFSSFVDVLTLATKTIEDFGLEVEF