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IVF0004281 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0004281
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptionhomeobox protein HAT3.1 isoform X2
Genome locationchr06:5126740..5127279
RNA-Seq ExpressionIVF0004281
SyntenyIVF0004281
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific (molecular function)
GO:0003677 - DNA binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN57486.1 hypothetical protein Csa_010932 [Cucumis sativus]1.38e-2791.38Show/hide
Query:  AQNEIRNVIKSGGSGRQTVRVKASQNAQSNGGPDLEDSETKPLYSLFPLRTQRRTKNQ
        A+NE RNVI+SGGSGRQTVRVKASQNAQSNGGPDLEDSETKPLYSLFPLRTQRRT+ Q
Subjt:  AQNEIRNVIKSGGSGRQTVRVKASQNAQSNGGPDLEDSETKPLYSLFPLRTQRRTKNQ
XP_022149327.1 homeobox protein HAT3.1 isoform X2 [Momordica charantia]7.63e-1180Show/hide
Query:  GGSGRQTVRVKASQNAQS-NGGPDLEDSETKPLYSLFPLRTQRRT
        GGSGRQTVRVKA +NA + NGGPDLEDSETKPLYSLF LRT+  T
Subjt:  GGSGRQTVRVKASQNAQS-NGGPDLEDSETKPLYSLFPLRTQRRT
TrEMBL top hitse value%identityAlignment
A0A0A0LBT3 Uncharacterized protein1.6e-1991.38Show/hide
Query:  AQNEIRNVIKSGGSGRQTVRVKASQNAQSNGGPDLEDSETKPLYSLFPLRTQRRTKNQ
        A+NE RNVI+SGGSGRQTVRVKASQNAQSNGGPDLEDSETKPLYSLFPLRTQRRT+ Q
Subjt:  AQNEIRNVIKSGGSGRQTVRVKASQNAQSNGGPDLEDSETKPLYSLFPLRTQRRTKNQ
A0A6J1D7M5 homeobox protein HAT3.1 isoform X22.7e-0880Show/hide
Query:  GGSGRQTVRVKASQNAQS-NGGPDLEDSETKPLYSLFPLRTQRRT
        GGSGRQTVRVKA +NA + NGGPDLEDSETKPLYSLF LRT+  T
Subjt:  GGSGRQTVRVKASQNAQS-NGGPDLEDSETKPLYSLFPLRTQRRT
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTGGGCCTATGGCCCATACAAAGAGAGGATGGAAGGTAGAAAATGGGCTTTTATAGATGTAGAAGGAGCCCAAAATGAGATACGCAATGTGATTAAGAGCGGCGG
TAGCGGAAGGCAGACGGTGCGCGTGAAGGCTAGCCAAAATGCACAGAGTAACGGTGGCCCAGATTTGGAGGACTCTGAGACAAAGCCGCTTTATTCTCTCTTCCCGCTGA
GAACACAAAGAAGAACCAAGAACCAAATACAACAACAACAACCACCATCGCCAAATTCCTTACTCCTTTCTTCCAAAAGAAAAAACTCCTTTAACAAACATCTCCATCTC
CTACAAGATCCAAAAACGGACAATACTATGTTCTTCTTCTGTACCAGATTCTCTTTGTTTCTTGTCAATTCACATGGAAATGGAAATGGAGTTTCCGAAGCTAATGCATT
GCCGTGTTCTTCTCTCTTCAAATGCTTTTCTCCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGTGGGCCTATGGCCCATACAAAGAGAGGATGGAAGGTAGAAAATGGGCTTTTATAGATGTAGAAGGAGCCCAAAATGAGATACGCAATGTGATTAAGAGCGGCGG
TAGCGGAAGGCAGACGGTGCGCGTGAAGGCTAGCCAAAATGCACAGAGTAACGGTGGCCCAGATTTGGAGGACTCTGAGACAAAGCCGCTTTATTCTCTCTTCCCGCTGA
GAACACAAAGAAGAACCAAGAACCAAATACAACAACAACAACCACCATCGCCAAATTCCTTACTCCTTTCTTCCAAAAGAAAAAACTCCTTTAACAAACATCTCCATCTC
CTACAAGATCCAAAAACGGACAATACTATGTTCTTCTTCTGTACCAGATTCTCTTTGTTTCTTGTCAATTCACATGGAAATGGAAATGGAGTTTCCGAAGCTAATGCATT
GCCGTGTTCTTCTCTCTTCAAATGCTTTTCTCCTTAA
Protein sequenceShow/hide protein sequence
MEWAYGPYKERMEGRKWAFIDVEGAQNEIRNVIKSGGSGRQTVRVKASQNAQSNGGPDLEDSETKPLYSLFPLRTQRRTKNQIQQQQPPSPNSLLLSSKRKNSFNKHLHL
LQDPKTDNTMFFFCTRFSLFLVNSHGNGNGVSEANALPCSSLFKCFSP