; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0004299 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0004299
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description40S ribosomal protein SA
Genome locationchr07:20841010..20843535
RNA-Seq ExpressionIVF0004299
SyntenyIVF0004299
Gene Ontology termsGO:0000028 - ribosomal small subunit assembly (biological process)
GO:0002181 - cytoplasmic translation (biological process)
GO:0022627 - cytosolic small ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001865 - Ribosomal protein S2
IPR005707 - Ribosomal protein S2, eukaryotic/archaeal
IPR018130 - Ribosomal protein S2, conserved site
IPR023591 - Ribosomal protein S2, flavodoxin-like domain superfamily
IPR027498 - Ribosomal protein S2, eukaryotic


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600605.1 40S ribosomal protein SA, partial [Cucurbita argyrosperma subsp. sororia]1.89e-19088.78Show/hide
Query:  MATGAEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPRDIIVQSARPYGQRAVLKFAQYTGAHA
        MATG EQRQL+QKEADIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENP+DIIVQSARPYGQRAVLKFAQYTGAHA
Subjt:  MATGAEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPRDIIVQSARPYGQRAVLKFAQYTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGYKWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPG+KWDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGYKWDVM

Query:  VDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPLAVDQWVPDAQWDASNVAPTAAAAS----VSNVEWAQEPV---GAADGWGVAIPPPAPSLEAVAP
        VDLFFYREPEE KEKEEE+AVAPPDYGIADFG+APL  D+WV DAQWDA ++ P AAAA+    VSNVEWA EPV   GAADGW VA  PPAP LEA AP
Subjt:  VDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPLAVDQWVPDAQWDASNVAPTAAAAS----VSNVEWAQEPV---GAADGWGVAIPPPAPSLEAVAP

Query:  PSS
        P++
Subjt:  PSS

XP_008453731.1 PREDICTED: 40S ribosomal protein SA-like [Cucumis melo]3.20e-217100Show/hide
Query:  MATGAEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPRDIIVQSARPYGQRAVLKFAQYTGAHA
        MATGAEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPRDIIVQSARPYGQRAVLKFAQYTGAHA
Subjt:  MATGAEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPRDIIVQSARPYGQRAVLKFAQYTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGYKWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGYKWDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGYKWDVM

Query:  VDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPLAVDQWVPDAQWDASNVAPTAAAASVSNVEWAQEPVGAADGWGVAIPPPAPSLEAVAPPSSDW
        VDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPLAVDQWVPDAQWDASNVAPTAAAASVSNVEWAQEPVGAADGWGVAIPPPAPSLEAVAPPSSDW
Subjt:  VDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPLAVDQWVPDAQWDASNVAPTAAAASVSNVEWAQEPVGAADGWGVAIPPPAPSLEAVAPPSSDW

XP_011653139.1 40S ribosomal protein SA [Cucumis sativus]2.23e-20896.31Show/hide
Query:  MATGAEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPRDIIVQSARPYGQRAVLKFAQYTGAHA
        MATG EQ QLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENP+DIIVQSARPYGQRAVLKFAQYTGAHA
Subjt:  MATGAEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPRDIIVQSARPYGQRAVLKFAQYTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGYKWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGYKWDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGYKWDVM

Query:  VDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPLAVDQWVPDAQWDASNVAPTAAAASVSNVEWAQEPVGAADGWGVAIPPPAPSLEAVAPPSSDW
        VDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAP+AVDQWVPDAQW A NVAPTAAAASVSN EWAQE V AADGWGVAIPPPAPSLEA APP+SDW
Subjt:  VDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPLAVDQWVPDAQWDASNVAPTAAAASVSNVEWAQEPVGAADGWGVAIPPPAPSLEAVAPPSSDW

XP_022136902.1 40S ribosomal protein SA-like [Momordica charantia]1.20e-19290.03Show/hide
Query:  MATGAEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPRDIIVQSARPYGQRAVLKFAQYTGAHA
        MATG  QRQLSQKEADIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTW+KLQMAARVIVAIENP+DIIVQSARPYGQRAVLKFAQYTGAHA
Subjt:  MATGAEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPRDIIVQSARPYGQRAVLKFAQYTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGYKWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGT+R G+KWDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGYKWDVM

Query:  VDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPLAVDQWVPDAQWDASNVAPTAAAASVSNVEWAQEPV--GAADGWGVAIP-PPAPSLEAVAPPSSD
        VDLFFYREPEE KE EEEEAVAPPDYGIADFG+APLAVDQW PDAQW AS+V P AAAA  SNVEWAQEPV  GAADGW  A+  PPAP +EA APP+SD
Subjt:  VDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPLAVDQWVPDAQWDASNVAPTAAAASVSNVEWAQEPV--GAADGWGVAIP-PPAPSLEAVAPPSSD

Query:  W
        W
Subjt:  W

XP_022942879.1 40S ribosomal protein SA-like [Cucurbita moschata]8.69e-19189.37Show/hide
Query:  MATGAEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPRDIIVQSARPYGQRAVLKFAQYTGAHA
        MATG EQRQL+QKEADIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENP+DIIVQSARPYGQRAVLKFAQYTGAHA
Subjt:  MATGAEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPRDIIVQSARPYGQRAVLKFAQYTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGYKWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPG+KWDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGYKWDVM

Query:  VDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPLAVDQWVPDAQWDASNVAPTAAAAS--VSNVEWAQEPV---GAADGWGVAIPPPAPSLEAVAPPS
        VDLFFYREPEE KEKEEE+AVAPPDYGIADFG+APL  D+WV DAQWDA ++ P AAAA+  VSNVEWA EPV   GAADGW VA  PPAP LEA APP+
Subjt:  VDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPLAVDQWVPDAQWDASNVAPTAAAAS--VSNVEWAQEPV---GAADGWGVAIPPPAPSLEAVAPPS

Query:  S
        +
Subjt:  S

TrEMBL top hitse value%identityAlignment
A0A0A0KUD9 40S ribosomal protein SA9.7e-16496.31Show/hide
Query:  MATGAEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPRDIIVQSARPYGQRAVLKFAQYTGAHA
        MATG EQ QLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENP+DIIVQSARPYGQRAVLKFAQYTGAHA
Subjt:  MATGAEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPRDIIVQSARPYGQRAVLKFAQYTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGYKWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGYKWDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGYKWDVM

Query:  VDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPLAVDQWVPDAQWDASNVAPTAAAASVSNVEWAQEPVGAADGWGVAIPPPAPSLEAVAPPSSDW
        VDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAP+AVDQWVPDAQW A NVAPTAAAASVSN EWAQE V AADGWGVAIPPPAPSLEA APP+SDW
Subjt:  VDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPLAVDQWVPDAQWDASNVAPTAAAASVSNVEWAQEPVGAADGWGVAIPPPAPSLEAVAPPSSDW

A0A1S3BXR8 40S ribosomal protein SA1.8e-170100Show/hide
Query:  MATGAEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPRDIIVQSARPYGQRAVLKFAQYTGAHA
        MATGAEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPRDIIVQSARPYGQRAVLKFAQYTGAHA
Subjt:  MATGAEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPRDIIVQSARPYGQRAVLKFAQYTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGYKWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGYKWDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGYKWDVM

Query:  VDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPLAVDQWVPDAQWDASNVAPTAAAASVSNVEWAQEPVGAADGWGVAIPPPAPSLEAVAPPSSDW
        VDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPLAVDQWVPDAQWDASNVAPTAAAASVSNVEWAQEPVGAADGWGVAIPPPAPSLEAVAPPSSDW
Subjt:  VDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPLAVDQWVPDAQWDASNVAPTAAAASVSNVEWAQEPVGAADGWGVAIPPPAPSLEAVAPPSSDW

A0A5A7TNP4 40S ribosomal protein SA1.8e-170100Show/hide
Query:  MATGAEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPRDIIVQSARPYGQRAVLKFAQYTGAHA
        MATGAEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPRDIIVQSARPYGQRAVLKFAQYTGAHA
Subjt:  MATGAEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPRDIIVQSARPYGQRAVLKFAQYTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGYKWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGYKWDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGYKWDVM

Query:  VDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPLAVDQWVPDAQWDASNVAPTAAAASVSNVEWAQEPVGAADGWGVAIPPPAPSLEAVAPPSSDW
        VDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPLAVDQWVPDAQWDASNVAPTAAAASVSNVEWAQEPVGAADGWGVAIPPPAPSLEAVAPPSSDW
Subjt:  VDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPLAVDQWVPDAQWDASNVAPTAAAASVSNVEWAQEPVGAADGWGVAIPPPAPSLEAVAPPSSDW

A0A6J1C6Q9 40S ribosomal protein SA8.5e-15290.03Show/hide
Query:  MATGAEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPRDIIVQSARPYGQRAVLKFAQYTGAHA
        MATG  QRQLSQKEADIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTW+KLQMAARVIVAIENP+DIIVQSARPYGQRAVLKFAQYTGAHA
Subjt:  MATGAEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPRDIIVQSARPYGQRAVLKFAQYTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGYKWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGT+R G+KWDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGYKWDVM

Query:  VDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPLAVDQWVPDAQWDASNVAPTAAAASVSNVEWAQEPV--GAADGWGVAIP-PPAPSLEAVAPPSSD
        VDLFFYREPEE KE EEEEAVAPPDYGIADFG+APLAVDQW PDAQW AS+V P AAAA  SNVEWAQEPV  GAADGW  A+  PPAP +EA APP+SD
Subjt:  VDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPLAVDQWVPDAQWDASNVAPTAAAASVSNVEWAQEPV--GAADGWGVAIP-PPAPSLEAVAPPSSD

Query:  W
        W
Subjt:  W

A0A6J1FSL7 40S ribosomal protein SA2.1e-15089.37Show/hide
Query:  MATGAEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPRDIIVQSARPYGQRAVLKFAQYTGAHA
        MATG EQRQL+QKEADIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENP+DIIVQSARPYGQRAVLKFAQYTGAHA
Subjt:  MATGAEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPRDIIVQSARPYGQRAVLKFAQYTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGYKWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPG+KWDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGYKWDVM

Query:  VDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPLAVDQWVPDAQWDASNVAPTAAAAS--VSNVEWAQEPV---GAADGWGVAIPPPAPSLEAVAPPS
        VDLFFYREPEE KEKEEE+AVAPPDYGIADFG+APL  D+WV DAQWDA ++ P AAAA+  VSNVEWA EPV   GAADGW VA  PPAP LEA APP+
Subjt:  VDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPLAVDQWVPDAQWDASNVAPTAAAAS--VSNVEWAQEPV---GAADGWGVAIPPPAPSLEAVAPPS

Query:  S
        +
Subjt:  S

SwissProt top hitse value%identityAlignment
A5BUU4 40S ribosomal protein SA5.2e-12275.99Show/hide
Query:  RQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPRDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTP
        R LSQKE DIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEKLQ+AARVIVAIENP+DIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTP
Subjt:  RQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPRDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTP

Query:  GTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGYKWDVMVDLFFYR
        GTFTNQLQTSF+EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMR T+ PG+KWDVMVDLFFYR
Subjt:  GTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGYKWDVMVDLFFYR

Query:  EPEEVKEKEEEEAVAPPDYGIADFGSAP---LAVDQW---VPDA-QW--DASNVAPTAAAASVSNVEWAQEPVG---AADGWGVAIPPPA----PSLEAV
        EPEE KE+E +E VA PDYGI D+ +     L    W   + DA QW  D   VAP  A    +  + A  P     A DGW  A  PP     P +E V
Subjt:  EPEEVKEKEEEEAVAPPDYGIADFGSAP---LAVDQW---VPDA-QW--DASNVAPTAAAASVSNVEWAQEPVG---AADGWGVAIPPPA----PSLEAV

Query:  APPS
         PP+
Subjt:  APPS

O22518 40S ribosomal protein SA1.6e-12678.11Show/hide
Query:  ATGAEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPRDIIVQSARPYGQRAVLKFAQYTGAHAI
        A  A  RQLSQKEADIQMMLAA+VHLGTKNCDFQMERY+FKRRNDGIYIINLGKTWEKLQ+AARVIVAIENP+DIIVQSARPYGQRAVLKFAQYTGAHAI
Subjt:  ATGAEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPRDIIVQSARPYGQRAVLKFAQYTGAHAI

Query:  AGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGYKWDVMV
        AGRHTPGTFTNQLQTSF+EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGT+RPG KWDVMV
Subjt:  AGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGYKWDVMV

Query:  DLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPLAVD-QW--VPDAQWDASNVAPTAAAASVSNVEWAQEPVGAADGWGVAIPPPAPSLEAVAPPS
        DLFFYREPEE K++EEEEA A  DY I DF +  +A D QW    D  W  +   P  A   V+    A+ P  A   WG A+PPP    +   PPS
Subjt:  DLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPLAVD-QW--VPDAQWDASNVAPTAAAASVSNVEWAQEPVGAADGWGVAIPPPAPSLEAVAPPS

O65751 40S ribosomal protein SA8.0e-12375.5Show/hide
Query:  TGAEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPRDIIVQSARPYGQRAVLKFAQYTGAHAIA
        T A  RQL+QKEADIQMMLAA+VHLGTKNC+FQMERY+FKRRNDGIYIINLGKTW+KL +AAR+IVAIEN +DIIVQSARPYGQRAVLKFAQYTGAHAIA
Subjt:  TGAEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPRDIIVQSARPYGQRAVLKFAQYTGAHAIA

Query:  GRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGYKWDVMVD
        GRHTPGTFTNQLQTSF+EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPM YVDIGIPANNKGKHSIGCLFWLLARMVLQMRGT+RPG KWDVMVD
Subjt:  GRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGYKWDVMVD

Query:  LFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPLAVDQWVPDAQWDASNVAPTAAAASVSNVEWAQEPVGAADGWGVAIPPP--APSLEAVAPPSSDW
        LFFYREPEE K+ EE+E VA PDY IADF  + +  D   P A     N A      +V  V WA  P   A  WG A+PPP   P+    + P++ W
Subjt:  LFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPLAVDQWVPDAQWDASNVAPTAAAASVSNVEWAQEPVGAADGWGVAIPPP--APSLEAVAPPSSDW

O80377 40S ribosomal protein SA8.8e-12275.17Show/hide
Query:  MATGAEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPRDIIVQSARPYGQRAVLKFAQYTGAHA
        MA+GA  R+LS  EADIQMM AAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL +AARVIV+IENP+DIIVQSARPYGQRAVLKFAQYTGAHA
Subjt:  MATGAEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPRDIIVQSARPYGQRAVLKFAQYTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGYKWDVM
        IAGRHTPGTFTNQLQTSF+EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRG +  G+KW+VM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGYKWDVM

Query:  VDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPL-AVDQW--VPDAQWDASNVAPTAAAASVSNVEWAQEPVGAADGWGVAIPPPAPSLEAVAPPS
        VDLFFYREPEE K++EEE+ +   DY +AD+ +AP+   DQW  +PDAQW    V P  +A       W      A DGW  A  PP P    +  P+
Subjt:  VDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPL-AVDQW--VPDAQWDASNVAPTAAAASVSNVEWAQEPVGAADGWGVAIPPPAPSLEAVAPPS

Q9ZSR8 40S ribosomal protein SA1.6e-11874.73Show/hide
Query:  QLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPRDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPG
        QLSQKEADI+MM AAEVHLGTKNC++QMERYVFKRRNDGIYI NLGKTWEKL MAARVIVAIENP+DIIVQSARPYGQRAVLKFAQYTGA+AIAGRHTPG
Subjt:  QLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPRDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPG

Query:  TFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGYKWDVMVDLFFYRE
        TFTNQ+QTSF+EPRLLILTDPRTDHQPIKE ALGNIP IAFCDTDSPMR+VDIGIPANNKGKHSIGCLFWLLARMVLQMRGT+RP  KWDVMVDLFFYRE
Subjt:  TFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGYKWDVMVDLFFYRE

Query:  PEEVKEKEEEEAVAPPDYGI--ADFGSAPLAVDQW----VPDAQWDASNVAPTAAAASVSNVEWAQEPVGAADGWGVAIPP
        PEE K ++E+E     ++G+   ++G      DQW    +PDA W     AP +AA +  +   +  P  A  GW  A+PP
Subjt:  PEEVKEKEEEEAVAPPDYGI--ADFGSAPLAVDQW----VPDAQWDASNVAPTAAAASVSNVEWAQEPVGAADGWGVAIPP

Arabidopsis top hitse value%identityAlignment
AT1G72370.1 40s ribosomal protein SA1.6e-11873.72Show/hide
Query:  MAT--GAEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPRDIIVQSARPYGQRAVLKFAQYTGA
        MAT   A   QLSQKEAD++MM AAEVHLGTKNC++QMERYVFKRRNDGIYI NLGKTWEKLQMAARVIVAIENP+DIIVQSARPYGQRAVLKFAQYTGA
Subjt:  MAT--GAEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPRDIIVQSARPYGQRAVLKFAQYTGA

Query:  HAIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGYKWD
        +AIAGRHTPGTFTNQ+QTSF+EPRLLILTDPRTDHQPIKE ALGNIP IAFCDTDSPMR+VDIGIPANNKGKHSIGCLFWLLARMVLQMRGT+  G KWD
Subjt:  HAIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGYKWD

Query:  VMVDLFFYREPEEVKEKEEEEAVAPPDYG---IADFGSAPLAVDQW----VPDAQWDASNVAPTAAAASVSNVEWAQEPVGAAD-GWGVAIPP
        VMVDLFFYREPEE K ++E+EA    +YG     ++G   +  DQW    +PDA W     AP +AA + ++  W+      AD GW  A PP
Subjt:  VMVDLFFYREPEEVKEKEEEEAVAPPDYG---IADFGSAPLAVDQW----VPDAQWDASNVAPTAAAASVSNVEWAQEPVGAAD-GWGVAIPP

AT1G72370.2 40s ribosomal protein SA7.9e-11873.63Show/hide
Query:  MAT--GAEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPRDIIVQSARPYGQRAVLKFAQYTGA
        MAT   A   QLSQKEAD++MM AAEVHLGTKNC++QMERYVFKRRNDGIYI NLGKTWEKLQMAARVIVAIENP+DIIVQSARPYGQRAVLKFAQYTGA
Subjt:  MAT--GAEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPRDIIVQSARPYGQRAVLKFAQYTGA

Query:  HAIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGYKWD
        +AIAGRHTPGTFTNQ+QTSF+EPRLLILTDPRTDHQPIKE ALGNIP IAFCDTDSPMR+VDIGIPANNKGKHSIGCLFWLLARMVLQMRGT+  G KWD
Subjt:  HAIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGYKWD

Query:  VMVDLFFYREPEEVKEKEEEEAVAPPDYG---IADFGSAPLAVDQW----VPDAQWDASNVAPTAAAASVSNVEWAQEPVGAADGWGVAIPP
        VMVDLFFYREPEE K ++E+EA    +YG     ++G   +  DQW    +PDA W     AP +AA + ++  W+    G   GW  A PP
Subjt:  VMVDLFFYREPEEVKEKEEEEAVAPPDYG---IADFGSAPLAVDQW----VPDAQWDASNVAPTAAAASVSNVEWAQEPVGAADGWGVAIPP

AT3G04770.1 40s ribosomal protein SA B2.3e-10188.72Show/hide
Query:  RQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPRDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTP
        RQ+S+KEADIQMML+A+VHLGTKNC++QMERYVFKRR+DGIYIINLGKTW+KLQMAARVIVAIENP+DIIVQSARPYGQRAVLKFAQYTG +AIAGRHTP
Subjt:  RQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPRDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTP

Query:  GTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGYKWDVMVD
        GTFTNQ+QTSF+EPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPM +VDIGIPANNKGKHSIGCLFWLLARMVLQMRGT+    KWDVMV+
Subjt:  GTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGYKWDVMVD

AT3G04770.2 40s ribosomal protein SA B4.1e-11473.4Show/hide
Query:  RQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPRDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTP
        RQ+S+KEADIQMML+A+VHLGTKNC++QMERYVFKRR+DGIYIINLGKTW+KLQMAARVIVAIENP+DIIVQSARPYGQRAVLKFAQYTG +AIAGRHTP
Subjt:  RQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPRDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTP

Query:  GTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGYKWDVMVDLFFYR
        GTFTNQ+QTSF+EPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPM +VDIGIPANNKGKHSIGCLFWLLARMVLQMRGT+    KWDVMVDLFFYR
Subjt:  GTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGYKWDVMVDLFFYR

Query:  EPEEVKEKEEEEAVAPPDYGIADFGSAPLAVDQW----VPDAQWDASNVAPTAAAASVSNVEWAQEPVGAADGWGVAIPPPA
        EPEE K++ +EEA    DYG+       +  DQW    + DA W      P +AA +V         V  A GW  A  P A
Subjt:  EPEEVKEKEEEEAVAPPDYGIADFGSAPLAVDQW----VPDAQWDASNVAPTAAAASVSNVEWAQEPVGAADGWGVAIPPPA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACTGGAGCAGAACAGCGTCAACTCTCACAGAAGGAGGCCGACATTCAGATGATGTTGGCCGCCGAGGTTCATCTAGGAACTAAGAACTGCGACTTCCAAATGGA
GCGATACGTTTTCAAGCGCCGGAATGATGGAATCTACATTATTAACTTGGGTAAAACATGGGAGAAACTTCAGATGGCTGCTAGAGTTATTGTCGCTATCGAGAATCCTC
GAGACATTATTGTTCAATCTGCTAGGCCTTATGGTCAGAGAGCTGTTTTGAAGTTTGCTCAATACACTGGTGCTCATGCAATTGCTGGGAGGCATACCCCTGGAACATTC
ACCAACCAGCTTCAAACCTCATTCAATGAGCCACGTCTTCTGATATTGACTGATCCTCGAACTGATCATCAGCCCATCAAGGAAGCTGCCCTTGGAAACATTCCTACAAT
TGCCTTTTGCGACACTGATTCGCCAATGCGGTATGTTGACATTGGGATTCCAGCTAATAACAAGGGGAAACACAGCATAGGATGTCTATTCTGGCTTCTTGCAAGGATGG
TTTTGCAGATGCGTGGAACGGTTCGCCCTGGGTACAAATGGGACGTGATGGTCGATTTGTTTTTCTACCGAGAGCCCGAGGAGGTGAAGGAGAAAGAGGAAGAAGAAGCT
GTTGCACCACCAGATTACGGCATTGCAGATTTTGGTTCTGCTCCATTGGCTGTAGATCAATGGGTTCCTGATGCTCAGTGGGATGCTTCTAATGTAGCTCCTACTGCTGC
CGCTGCTTCAGTTTCTAATGTTGAGTGGGCACAAGAGCCAGTCGGAGCAGCAGACGGATGGGGTGTTGCCATACCACCACCGGCACCTTCACTTGAAGCTGTTGCACCTC
CTTCCTCCGATTGGTAA
mRNA sequenceShow/hide mRNA sequence
CACGAGGCTTTCTTCATCAGAAGAACCCTTTTATTCCGTCCGCCAAATCCAACTCATACTACTAGATTTCCGCGGCGGCGGCGGAGGCGGTTTGCGCTCTCTTGAACATA
TCTTCGAGATTCGGCAATGGCGACTGGAGCAGAACAGCGTCAACTCTCACAGAAGGAGGCCGACATTCAGATGATGTTGGCCGCCGAGGTTCATCTAGGAACTAAGAACT
GCGACTTCCAAATGGAGCGATACGTTTTCAAGCGCCGGAATGATGGAATCTACATTATTAACTTGGGTAAAACATGGGAGAAACTTCAGATGGCTGCTAGAGTTATTGTC
GCTATCGAGAATCCTCGAGACATTATTGTTCAATCTGCTAGGCCTTATGGTCAGAGAGCTGTTTTGAAGTTTGCTCAATACACTGGTGCTCATGCAATTGCTGGGAGGCA
TACCCCTGGAACATTCACCAACCAGCTTCAAACCTCATTCAATGAGCCACGTCTTCTGATATTGACTGATCCTCGAACTGATCATCAGCCCATCAAGGAAGCTGCCCTTG
GAAACATTCCTACAATTGCCTTTTGCGACACTGATTCGCCAATGCGGTATGTTGACATTGGGATTCCAGCTAATAACAAGGGGAAACACAGCATAGGATGTCTATTCTGG
CTTCTTGCAAGGATGGTTTTGCAGATGCGTGGAACGGTTCGCCCTGGGTACAAATGGGACGTGATGGTCGATTTGTTTTTCTACCGAGAGCCCGAGGAGGTGAAGGAGAA
AGAGGAAGAAGAAGCTGTTGCACCACCAGATTACGGCATTGCAGATTTTGGTTCTGCTCCATTGGCTGTAGATCAATGGGTTCCTGATGCTCAGTGGGATGCTTCTAATG
TAGCTCCTACTGCTGCCGCTGCTTCAGTTTCTAATGTTGAGTGGGCACAAGAGCCAGTCGGAGCAGCAGACGGATGGGGTGTTGCCATACCACCACCGGCACCTTCACTT
GAAGCTGTTGCACCTCCTTCCTCCGATTGGTAACAAGGGAAGCTTTCCCTCTTACCCACAATTTTGATTCATCGTTATGAGTTTCGCTTGTTCATGTAGCAGTCCCACCT
AATTAGTTGGGCATAAGTAGGCTTTAGCACTCACAGTCGTAAACCAAAAATGTACTACCACCTTTTTTTTTTTTTCTTTTTTTCTTTTTTTCTTTTTGAAGACTGATTTC
TGTTTTCTTTCTTCTAGTCCAGTTTTAGGTTTTAAGATTGGACGTTTGTTTTCCTTCAACGTGGGTATTTTGGTTTGGTACACTTTTTTATGAGAAACAAAAAGTTGCTC
CAACCATTACCAAGACGAAATACTTTGTTCTACTGATGGAATTATGTACCAATATTGTTTTTGTAGTGGAGAAACTGTTGCCCTTATTTCACCTCAGTTATCGACCATTT
GTTCTATTAGCTGGAATTATGTTCCTTGGAGAATGTTATATGAGATAATTGTCTTGTTGTTGGTCC
Protein sequenceShow/hide protein sequence
MATGAEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPRDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTF
TNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGYKWDVMVDLFFYREPEEVKEKEEEEA
VAPPDYGIADFGSAPLAVDQWVPDAQWDASNVAPTAAAASVSNVEWAQEPVGAADGWGVAIPPPAPSLEAVAPPSSDW