; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0004303 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0004303
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description50S ribosomal protein L35
Genome locationchr02:11724944..11726867
RNA-Seq ExpressionIVF0004303
SyntenyIVF0004303
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0015934 - large ribosomal subunit (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001706 - Ribosomal protein L35, non-mitochondrial
IPR021137 - Ribosomal protein L35
IPR037229 - Ribosomal protein L35 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035109.1 50S ribosomal protein L35 [Cucumis melo var. makuwa]8.96e-8091.03Show/hide
Query:  MASASMAVSFGLRFSPLCSRPSFRVSHTSVGLASFNKVNSLKLSSSHNISGFGLNFLQKLSHISPTSQIHTPFT-------------ASAKRFRVTGRGK
        MASASMAVSFGLRFSPLCSRPSFRVSHTSVGLASFNKVNSLKLSSSHNISGFGLNFLQKLSHISPTSQIHTPFT             ASAKRFRVTGRGK
Subjt:  MASASMAVSFGLRFSPLCSRPSFRVSHTSVGLASFNKVNSLKLSSSHNISGFGLNFLQKLSHISPTSQIHTPFT-------------ASAKRFRVTGRGK

Query:  IVRRRAGKQHLLYKKNAKRRLRLSKLHPVSRSDYDNVIGALPYLK
        IVRRRAGKQHLLYKKNAKRRLRLSKLHPVSRSDYDNVIGALPYLK
Subjt:  IVRRRAGKQHLLYKKNAKRRLRLSKLHPVSRSDYDNVIGALPYLK

XP_004146668.1 50S ribosomal protein L35, chloroplastic [Cucumis sativus]4.80e-7786.09Show/hide
Query:  MASASMAVSFGLRFSPLCSRPSFRVSHTSVGLASFNKVNSLKLSSSHNISGFGLNFLQKLSHISPTSQIHTPFT-------------ASAKRFRVTGRGK
        MASASMAVSFGLRFSPLCSRPSFRVSHTSVG+AS NKVNSLKLSSSHNISGFG N LQK SHISPTSQI TPFT             ASAKRFRVTGRGK
Subjt:  MASASMAVSFGLRFSPLCSRPSFRVSHTSVGLASFNKVNSLKLSSSHNISGFGLNFLQKLSHISPTSQIHTPFT-------------ASAKRFRVTGRGK

Query:  IVRRRAGKQHLLYKKNAKRRLRLSKLHPVSRSDYDNVIGALPYLKVNRQAQ
        IVRRRAGKQHLL KKNAKRRLRLSK+HPVSRSDYDNVIGALPYLKVNRQAQ
Subjt:  IVRRRAGKQHLLYKKNAKRRLRLSKLHPVSRSDYDNVIGALPYLKVNRQAQ

XP_008443834.1 PREDICTED: 50S ribosomal protein L35, chloroplastic [Cucumis melo]3.84e-8390.73Show/hide
Query:  MASASMAVSFGLRFSPLCSRPSFRVSHTSVGLASFNKVNSLKLSSSHNISGFGLNFLQKLSHISPTSQIHTPFT-------------ASAKRFRVTGRGK
        MASASMAVSFGLRFSPLCSRPSFRVSHTSVGLASFNKVNSLKLSSSHNISGFGLNFLQK SHISPTSQIHTPFT             ASAKRFRVTGRGK
Subjt:  MASASMAVSFGLRFSPLCSRPSFRVSHTSVGLASFNKVNSLKLSSSHNISGFGLNFLQKLSHISPTSQIHTPFT-------------ASAKRFRVTGRGK

Query:  IVRRRAGKQHLLYKKNAKRRLRLSKLHPVSRSDYDNVIGALPYLKVNRQAQ
        IVRRRAGKQHLLYKKNAKRRLRLSKLHPVSRSDYDNVIGALPYLKVNRQAQ
Subjt:  IVRRRAGKQHLLYKKNAKRRLRLSKLHPVSRSDYDNVIGALPYLKVNRQAQ

XP_022135558.1 50S ribosomal protein L35, chloroplastic isoform X1 [Momordica charantia]5.65e-6777.63Show/hide
Query:  MASASMAVSFGLRFSPLCSRPSFRVSHTSVGLAS-FNKVNSLKLSSSHNISGFGLNFLQKLSHISPTSQIHTPFT-------------ASAKRFRVTGRG
        MASAS  VSFGLRFSPLCSRPS RVSH SV LAS FNKVNSL+L SS NISGFG+  LQK  HI+PTSQ+HTP T             ASAKRFRVTGRG
Subjt:  MASASMAVSFGLRFSPLCSRPSFRVSHTSVGLAS-FNKVNSLKLSSSHNISGFGLNFLQKLSHISPTSQIHTPFT-------------ASAKRFRVTGRG

Query:  KIVRRRAGKQHLLYKKNAKRRLRLSKLHPVSRSDYDNVIGALPYLKVNRQAQ
        KIVRRRAGKQHLLYKKN KR+LRLSK+HPVSRSDYDNVIGALPYLKVNRQA+
Subjt:  KIVRRRAGKQHLLYKKNAKRRLRLSKLHPVSRSDYDNVIGALPYLKVNRQAQ

XP_038878434.1 50S ribosomal protein L35, chloroplastic [Benincasa hispida]8.88e-7382.78Show/hide
Query:  MASASMAVSFGLRFSPLCSRPSFRVSHTSVGLASFNKVNSLKLSSSHNISGFGLNFLQKLSHISPTSQIHTPFT-------------ASAKRFRVTGRGK
        MASASMAVS GLRFSPL SRPS RVSH+SVGLASFNK NSLKLSSS+NISGFG+ FLQK SHISPT QIHTPFT             ASAKRFRVTGRGK
Subjt:  MASASMAVSFGLRFSPLCSRPSFRVSHTSVGLASFNKVNSLKLSSSHNISGFGLNFLQKLSHISPTSQIHTPFT-------------ASAKRFRVTGRGK

Query:  IVRRRAGKQHLLYKKNAKRRLRLSKLHPVSRSDYDNVIGALPYLKVNRQAQ
        IVRRRAGKQHLLYKKN KRRLRLSK+HPVSRSDYDNVIGALPYLKVNRQA+
Subjt:  IVRRRAGKQHLLYKKNAKRRLRLSKLHPVSRSDYDNVIGALPYLKVNRQAQ

TrEMBL top hitse value%identityAlignment
A0A0A0LYX0 50S ribosomal protein L352.3e-5986.09Show/hide
Query:  MASASMAVSFGLRFSPLCSRPSFRVSHTSVGLASFNKVNSLKLSSSHNISGFGLNFLQKLSHISPTSQIHTPFT-------------ASAKRFRVTGRGK
        MASASMAVSFGLRFSPLCSRPSFRVSHTSVG+AS NKVNSLKLSSSHNISGFG N LQK SHISPTSQI TPFT             ASAKRFRVTGRGK
Subjt:  MASASMAVSFGLRFSPLCSRPSFRVSHTSVGLASFNKVNSLKLSSSHNISGFGLNFLQKLSHISPTSQIHTPFT-------------ASAKRFRVTGRGK

Query:  IVRRRAGKQHLLYKKNAKRRLRLSKLHPVSRSDYDNVIGALPYLKVNRQAQ
        IVRRRAGKQHLL KKNAKRRLRLSK+HPVSRSDYDNVIGALPYLKVNRQAQ
Subjt:  IVRRRAGKQHLLYKKNAKRRLRLSKLHPVSRSDYDNVIGALPYLKVNRQAQ

A0A1S3B9R8 50S ribosomal protein L355.3e-6490.73Show/hide
Query:  MASASMAVSFGLRFSPLCSRPSFRVSHTSVGLASFNKVNSLKLSSSHNISGFGLNFLQKLSHISPTSQIHTPFT-------------ASAKRFRVTGRGK
        MASASMAVSFGLRFSPLCSRPSFRVSHTSVGLASFNKVNSLKLSSSHNISGFGLNFLQK SHISPTSQIHTPFT             ASAKRFRVTGRGK
Subjt:  MASASMAVSFGLRFSPLCSRPSFRVSHTSVGLASFNKVNSLKLSSSHNISGFGLNFLQKLSHISPTSQIHTPFT-------------ASAKRFRVTGRGK

Query:  IVRRRAGKQHLLYKKNAKRRLRLSKLHPVSRSDYDNVIGALPYLKVNRQAQ
        IVRRRAGKQHLLYKKNAKRRLRLSKLHPVSRSDYDNVIGALPYLKVNRQAQ
Subjt:  IVRRRAGKQHLLYKKNAKRRLRLSKLHPVSRSDYDNVIGALPYLKVNRQAQ

A0A5D3B7R7 50S ribosomal protein L351.9e-6191.03Show/hide
Query:  MASASMAVSFGLRFSPLCSRPSFRVSHTSVGLASFNKVNSLKLSSSHNISGFGLNFLQKLSHISPTSQIHTPFT-------------ASAKRFRVTGRGK
        MASASMAVSFGLRFSPLCSRPSFRVSHTSVGLASFNKVNSLKLSSSHNISGFGLNFLQKLSHISPTSQIHTPFT             ASAKRFRVTGRGK
Subjt:  MASASMAVSFGLRFSPLCSRPSFRVSHTSVGLASFNKVNSLKLSSSHNISGFGLNFLQKLSHISPTSQIHTPFT-------------ASAKRFRVTGRGK

Query:  IVRRRAGKQHLLYKKNAKRRLRLSKLHPVSRSDYDNVIGALPYLK
        IVRRRAGKQHLLYKKNAKRRLRLSKLHPVSRSDYDNVIGALPYLK
Subjt:  IVRRRAGKQHLLYKKNAKRRLRLSKLHPVSRSDYDNVIGALPYLK

A0A6J1C550 50S ribosomal protein L351.0e-5177.63Show/hide
Query:  MASASMAVSFGLRFSPLCSRPSFRVSHTSVGLA-SFNKVNSLKLSSSHNISGFGLNFLQKLSHISPTSQIHTPFT-------------ASAKRFRVTGRG
        MASAS  VSFGLRFSPLCSRPS RVSH SV LA SFNKVNSL+L SS NISGFG+  LQK  HI+PTSQ+HTP T             ASAKRFRVTGRG
Subjt:  MASASMAVSFGLRFSPLCSRPSFRVSHTSVGLA-SFNKVNSLKLSSSHNISGFGLNFLQKLSHISPTSQIHTPFT-------------ASAKRFRVTGRG

Query:  KIVRRRAGKQHLLYKKNAKRRLRLSKLHPVSRSDYDNVIGALPYLKVNRQAQ
        KIVRRRAGKQHLLYKKN KR+LRLSK+HPVSRSDYDNVIGALPYLKVNRQA+
Subjt:  KIVRRRAGKQHLLYKKNAKRRLRLSKLHPVSRSDYDNVIGALPYLKVNRQAQ

A0A6J1JDG6 50S ribosomal protein L353.7e-4974.17Show/hide
Query:  MASASMAVSFGLRFSPLCSRPSFRVSHTSVGLASFNKVNSLKLSSSHNISGFGLNFLQKLSHISPTSQIHTPFT-------------ASAKRFRVTGRGK
        MASAS +VSFGLRFSPLCSR S RVS  SV L S NK  SL+LSSSHN+S FG+  LQK  HI+P+S+IHTPFT             ASAKRFRVTGRGK
Subjt:  MASASMAVSFGLRFSPLCSRPSFRVSHTSVGLASFNKVNSLKLSSSHNISGFGLNFLQKLSHISPTSQIHTPFT-------------ASAKRFRVTGRGK

Query:  IVRRRAGKQHLLYKKNAKRRLRLSKLHPVSRSDYDNVIGALPYLKVNRQAQ
        IVRRRAGKQHLLYKKN KR+LRLSK+HPVSRSDYDNVIGALPYLKVNRQA+
Subjt:  IVRRRAGKQHLLYKKNAKRRLRLSKLHPVSRSDYDNVIGALPYLKVNRQAQ

SwissProt top hitse value%identityAlignment
P23326 50S ribosomal protein L35, chloroplastic2.2e-2250.62Show/hide
Query:  MASASMAVSF---GLRFSPLCSRPSFRVSHT-SVGLASFNK--VNSLKLSSSHNISGFGLNFL----QKLSHISPTSQIHTP-FT-------------AS
        MASA+  +SF    L  SP    PS R S    + L  FNK   ++L LSSS +IS   +  +    +++S +  +    +P FT             AS
Subjt:  MASASMAVSF---GLRFSPLCSRPSFRVSHT-SVGLASFNK--VNSLKLSSSHNISGFGLNFL----QKLSHISPTSQIHTP-FT-------------AS

Query:  AKRFRVTGRGKIVRRRAGKQHLLYKKNAKRRLRLSKLHPVSRSDYDNVIGALPYLKVNRQ
        AKRFRVTG+GKIVRRRAGKQHLL KKN KR+ RLSKL  V RSDYDNVIGALPYLKVNR+
Subjt:  AKRFRVTGRGKIVRRRAGKQHLLYKKNAKRRLRLSKLHPVSRSDYDNVIGALPYLKVNRQ

Q31NR1 50S ribosomal protein L355.7e-0753.57Show/hide
Query:  ASAKRFRVTGRGKIVRRRAGKQHLLYKKNAKRRLRLSKLHPVSRSDYDNVIGALPY
        A+AKRFR++G GK +RR+A K HLL  KNA RR RLS+   V  +D + V   LPY
Subjt:  ASAKRFRVTGRGKIVRRRAGKQHLLYKKNAKRRLRLSKLHPVSRSDYDNVIGALPY

Q5N5F4 50S ribosomal protein L355.7e-0753.57Show/hide
Query:  ASAKRFRVTGRGKIVRRRAGKQHLLYKKNAKRRLRLSKLHPVSRSDYDNVIGALPY
        A+AKRFR++G GK +RR+A K HLL  KNA RR RLS+   V  +D + V   LPY
Subjt:  ASAKRFRVTGRGKIVRRRAGKQHLLYKKNAKRRLRLSKLHPVSRSDYDNVIGALPY

Q8VZ55 50S ribosomal protein L35, chloroplastic2.3e-2455.26Show/hide
Query:  MASASMAVSFGLRFSPLCSRPSFRVS-HTSVGLASFNKVNSLKLSSSHNISGFGLNFLQKLSHI-SPTSQIHTPFT-------------ASAKRFRVTGR
        MAS SMA S  + F       S +VS  +SV  A+        LSSSH+ISG       K+S + SP SQ    FT             ASAKRFRVTGR
Subjt:  MASASMAVSFGLRFSPLCSRPSFRVS-HTSVGLASFNKVNSLKLSSSHNISGFGLNFLQKLSHI-SPTSQIHTPFT-------------ASAKRFRVTGR

Query:  GKIVRRRAGKQHLLYKKNAKRRLRLSKLHPVSRSDYDNVIGALPYLKVNRQA
        GKIVRRR+GKQHLL KKN KR+LRLSK+  V+RSDYDNVIGALPYLKVNR+A
Subjt:  GKIVRRRAGKQHLLYKKNAKRRLRLSKLHPVSRSDYDNVIGALPYLKVNRQA

Q8YRL9 50S ribosomal protein L359.7e-0752.63Show/hide
Query:  ASAKRFRVTGRGKIVRRRAGKQHLLYKKNAKRRLRLSKLHPVSRSDYDNVIGALPYL
        A+AKRFR TG GKIVRR+A K HLL  K   ++ + SK+  V+  D +NV   LPYL
Subjt:  ASAKRFRVTGRGKIVRRRAGKQHLLYKKNAKRRLRLSKLHPVSRSDYDNVIGALPYL

Arabidopsis top hitse value%identityAlignment
AT2G24090.1 Ribosomal protein L351.6e-2555.26Show/hide
Query:  MASASMAVSFGLRFSPLCSRPSFRVS-HTSVGLASFNKVNSLKLSSSHNISGFGLNFLQKLSHI-SPTSQIHTPFT-------------ASAKRFRVTGR
        MAS SMA S  + F       S +VS  +SV  A+        LSSSH+ISG       K+S + SP SQ    FT             ASAKRFRVTGR
Subjt:  MASASMAVSFGLRFSPLCSRPSFRVS-HTSVGLASFNKVNSLKLSSSHNISGFGLNFLQKLSHI-SPTSQIHTPFT-------------ASAKRFRVTGR

Query:  GKIVRRRAGKQHLLYKKNAKRRLRLSKLHPVSRSDYDNVIGALPYLKVNRQA
        GKIVRRR+GKQHLL KKN KR+LRLSK+  V+RSDYDNVIGALPYLKVNR+A
Subjt:  GKIVRRRAGKQHLLYKKNAKRRLRLSKLHPVSRSDYDNVIGALPYLKVNRQA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATCTGCTTCAATGGCGGTGTCCTTTGGTCTTAGGTTCTCCCCACTCTGCTCTCGCCCATCATTTCGCGTCTCTCATACTTCCGTCGGGCTTGCTTCTTTCAACAA
GGTCAATTCCTTGAAGCTTAGTTCCTCCCACAACATTTCCGGCTTTGGACTCAATTTCCTTCAGAAGCTATCTCACATTTCTCCCACTTCTCAAATTCATACTCCTTTTA
CTGCTTCGGCGAAGCGATTCAGAGTAACGGGTCGGGGGAAAATCGTTCGGAGGAGAGCTGGAAAGCAGCATTTGCTGTACAAGAAGAACGCAAAGAGGAGATTACGCCTC
TCCAAACTGCACCCAGTGAGCCGGAGTGACTATGATAATGTGATTGGTGCTTTGCCGTACTTGAAGGTGAATAGGCAGGCCCAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCATCTGCTTCAATGGCGGTGTCCTTTGGTCTTAGGTTCTCCCCACTCTGCTCTCGCCCATCATTTCGCGTCTCTCATACTTCCGTCGGGCTTGCTTCTTTCAACAA
GGTCAATTCCTTGAAGCTTAGTTCCTCCCACAACATTTCCGGCTTTGGACTCAATTTCCTTCAGAAGCTATCTCACATTTCTCCCACTTCTCAAATTCATACTCCTTTTA
CTGCTTCGGCGAAGCGATTCAGAGTAACGGGTCGGGGGAAAATCGTTCGGAGGAGAGCTGGAAAGCAGCATTTGCTGTACAAGAAGAACGCAAAGAGGAGATTACGCCTC
TCCAAACTGCACCCAGTGAGCCGGAGTGACTATGATAATGTGATTGGTGCTTTGCCGTACTTGAAGGTGAATAGGCAGGCCCAGTAG
Protein sequenceShow/hide protein sequence
MASASMAVSFGLRFSPLCSRPSFRVSHTSVGLASFNKVNSLKLSSSHNISGFGLNFLQKLSHISPTSQIHTPFTASAKRFRVTGRGKIVRRRAGKQHLLYKKNAKRRLRL
SKLHPVSRSDYDNVIGALPYLKVNRQAQ