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IVF0004334 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0004334
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr11:8187153..8187338
RNA-Seq ExpressionIVF0004334
SyntenyIVF0004334
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038275.1 retrotransposon protein [Cucumis melo var. makuwa]1.85e-2986.89Show/hide
Query:  MACCFLYNLINQEMTYIDELDEEVDGDSTHATTSGDDITYIEPSNVWTEWRDALASSMFTE
        MACC L+NLIN+E+TYI+ELD+E DGDSTHATTSGDDITYIEPSN WTEWRDALASSMFTE
Subjt:  MACCFLYNLINQEMTYIDELDEEVDGDSTHATTSGDDITYIEPSNVWTEWRDALASSMFTE

KAA0048149.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]8.79e-3086.89Show/hide
Query:  MACCFLYNLINQEMTYIDELDEEVDGDSTHATTSGDDITYIEPSNVWTEWRDALASSMFTE
        MACC L+NLIN+EM+YI+ELD+E DGDSTHATTSGDDITYIEPSN WTEWRDALASSMFTE
Subjt:  MACCFLYNLINQEMTYIDELDEEVDGDSTHATTSGDDITYIEPSNVWTEWRDALASSMFTE

TYJ98396.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]3.31e-36100Show/hide
Query:  MACCFLYNLINQEMTYIDELDEEVDGDSTHATTSGDDITYIEPSNVWTEWRDALASSMFTE
        MACCFLYNLINQEMTYIDELDEEVDGDSTHATTSGDDITYIEPSNVWTEWRDALASSMFTE
Subjt:  MACCFLYNLINQEMTYIDELDEEVDGDSTHATTSGDDITYIEPSNVWTEWRDALASSMFTE

TYK02845.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]6.26e-2675.41Show/hide
Query:  MACCFLYNLINQEMTYIDELDEEVDGDSTHATTSGDDITYIEPSNVWTEWRDALASSMFTE
        M CC ++NLIN+EMTYI ELD+E DGDS HATT+GDDI  I+PSN WT+WRDALASSMFTE
Subjt:  MACCFLYNLINQEMTYIDELDEEVDGDSTHATTSGDDITYIEPSNVWTEWRDALASSMFTE

XP_008444024.1 PREDICTED: uncharacterized protein LOC103487473 [Cucumis melo]1.49e-2986.89Show/hide
Query:  MACCFLYNLINQEMTYIDELDEEVDGDSTHATTSGDDITYIEPSNVWTEWRDALASSMFTE
        MACC L+NLIN+E+TYI+ELD+E DGDSTHATTSGDDITYIEPSN WTEWRDALASSMFTE
Subjt:  MACCFLYNLINQEMTYIDELDEEVDGDSTHATTSGDDITYIEPSNVWTEWRDALASSMFTE

TrEMBL top hitse value%identityAlignment
A0A1S3B9E4 uncharacterized protein LOC1034874737.6e-2386.89Show/hide
Query:  MACCFLYNLINQEMTYIDELDEEVDGDSTHATTSGDDITYIEPSNVWTEWRDALASSMFTE
        MACC L+NLIN+E+TYI+ELD+E DGDSTHATTSGDDITYIEPSN WTEWRDALASSMFTE
Subjt:  MACCFLYNLINQEMTYIDELDEEVDGDSTHATTSGDDITYIEPSNVWTEWRDALASSMFTE

A0A5A7TA66 Retrotransposon protein7.6e-2386.89Show/hide
Query:  MACCFLYNLINQEMTYIDELDEEVDGDSTHATTSGDDITYIEPSNVWTEWRDALASSMFTE
        MACC L+NLIN+E+TYI+ELD+E DGDSTHATTSGDDITYIEPSN WTEWRDALASSMFTE
Subjt:  MACCFLYNLINQEMTYIDELDEEVDGDSTHATTSGDDITYIEPSNVWTEWRDALASSMFTE

A0A5A7U3X6 Putative nuclease HARBI15.8e-2386.89Show/hide
Query:  MACCFLYNLINQEMTYIDELDEEVDGDSTHATTSGDDITYIEPSNVWTEWRDALASSMFTE
        MACC L+NLIN+EM+YI+ELD+E DGDSTHATTSGDDITYIEPSN WTEWRDALASSMFTE
Subjt:  MACCFLYNLINQEMTYIDELDEEVDGDSTHATTSGDDITYIEPSNVWTEWRDALASSMFTE

A0A5D3BH76 Putative nuclease HARBI11.7e-27100Show/hide
Query:  MACCFLYNLINQEMTYIDELDEEVDGDSTHATTSGDDITYIEPSNVWTEWRDALASSMFTE
        MACCFLYNLINQEMTYIDELDEEVDGDSTHATTSGDDITYIEPSNVWTEWRDALASSMFTE
Subjt:  MACCFLYNLINQEMTYIDELDEEVDGDSTHATTSGDDITYIEPSNVWTEWRDALASSMFTE

A0A5D3DV28 Retrotransposon protein1.1e-1882.14Show/hide
Query:  MACCFLYNLINQEMTYIDELDEEVDGDSTHATTSGDDITYIEPSNVWTEWRDALAS
        MACC LYNLIN +M YIDELD+E DGDSTHATT GD+ITYIEPSN WTEWRD LAS
Subjt:  MACCFLYNLINQEMTYIDELDEEVDGDSTHATTSGDDITYIEPSNVWTEWRDALAS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTGTTGTTTCCTTTATAATTTAATAAATCAAGAAATGACTTACATCGATGAATTGGATGAGGAAGTCGATGGTGACTCGACACACGCAACTACTAGTGGGGACGA
CATCACATATATTGAGCCCTCAAACGTATGGACTGAATGGCGTGATGCGCTTGCTTCGTCAATGTTCACGGAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTTGTTGTTTCCTTTATAATTTAATAAATCAAGAAATGACTTACATCGATGAATTGGATGAGGAAGTCGATGGTGACTCGACACACGCAACTACTAGTGGGGACGA
CATCACATATATTGAGCCCTCAAACGTATGGACTGAATGGCGTGATGCGCTTGCTTCGTCAATGTTCACGGAATAG
Protein sequenceShow/hide protein sequence
MACCFLYNLINQEMTYIDELDEEVDGDSTHATTSGDDITYIEPSNVWTEWRDALASSMFTE