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IVF0004348 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0004348
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationtig00000430:891902..892567
RNA-Seq ExpressionIVF0004348
SyntenyIVF0004348
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049498.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]2.85e-34100Show/hide
Query:  MMTCIQTTAERWKAASALRLRLHFSSMVELLPFQLIPSLQILKGYTLLCRSIDYSICAVHLPHLFI
        MMTCIQTTAERWKAASALRLRLHFSSMVELLPFQLIPSLQILKGYTLLCRSIDYSICAVHLPHLFI
Subjt:  MMTCIQTTAERWKAASALRLRLHFSSMVELLPFQLIPSLQILKGYTLLCRSIDYSICAVHLPHLFI
KGN57113.1 hypothetical protein Csa_011647 [Cucumis sativus]6.40e-3185.29Show/hide
Query:  MMTCIQTTAERWKAASALRLRLHFSSMVELLPFQLIPSLQILKGYTLLCRSIDYSICAVHLPHLFIDV
        M+TCIQTTAERWK ASAL LRLH SSMVELL FQLI SLQIL+GYTLL RS+DYSICAVHLPHLFI V
Subjt:  MMTCIQTTAERWKAASALRLRLHFSSMVELLPFQLIPSLQILKGYTLLCRSIDYSICAVHLPHLFIDV
TrEMBL top hitse value%identityAlignment
A0A0A0L5T9 Uncharacterized protein9.3e-2285.29Show/hide
Query:  MMTCIQTTAERWKAASALRLRLHFSSMVELLPFQLIPSLQILKGYTLLCRSIDYSICAVHLPHLFIDV
        M+TCIQTTAERWK ASAL LRLH SSMVELL FQLI SLQIL+GYTLL RS+DYSICAVHLPHLFI V
Subjt:  MMTCIQTTAERWKAASALRLRLHFSSMVELLPFQLIPSLQILKGYTLLCRSIDYSICAVHLPHLFIDV
A0A5D3CY28 Pentatricopeptide repeat-containing protein3.9e-28100Show/hide
Query:  MMTCIQTTAERWKAASALRLRLHFSSMVELLPFQLIPSLQILKGYTLLCRSIDYSICAVHLPHLFI
        MMTCIQTTAERWKAASALRLRLHFSSMVELLPFQLIPSLQILKGYTLLCRSIDYSICAVHLPHLFI
Subjt:  MMTCIQTTAERWKAASALRLRLHFSSMVELLPFQLIPSLQILKGYTLLCRSIDYSICAVHLPHLFI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGACCTGCATACAAACTACTGCTGAGAGATGGAAGGCTGCTTCTGCTCTTCGTCTGCGCCTTCATTTCTCTTCCATGGTTGAGCTCCTCCCATTTCAGCTGATTCC
ATCACTGCAAATTCTCAAGGGTTACACTCTCTTATGCCGCTCGATTGACTATTCAATTTGCGCGGTTCATCTGCCTCACTTGTTCATCGATGTATAA
mRNA sequenceShow/hide mRNA sequence
ATGATGACCTGCATACAAACTACTGCTGAGAGATGGAAGGCTGCTTCTGCTCTTCGTCTGCGCCTTCATTTCTCTTCCATGGTTGAGCTCCTCCCATTTCAGCTGATTCC
ATCACTGCAAATTCTCAAGGGTTACACTCTCTTATGCCGCTCGATTGACTATTCAATTTGCGCGGTTCATCTGCCTCACTTGTTCATCGATGTATAA
Protein sequenceShow/hide protein sequence
MMTCIQTTAERWKAASALRLRLHFSSMVELLPFQLIPSLQILKGYTLLCRSIDYSICAVHLPHLFIDV