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IVF0004351 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0004351
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGag-pro-like protein
Genome locationchr03:15149851..15150341
RNA-Seq ExpressionIVF0004351
SyntenyIVF0004351
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032021.1 Gag-pro-like protein [Cucumis melo var. makuwa]2.89e-7182.07Show/hide
Query:  MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDMPAYPPGFTPQRSSSPRMGDRTYPTSFPAPNPNTTTQQAAHANNP
        MDEQ+NDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAG SSQVEVDLNQVLEDM  YPPGFTPQ+SSSPR+ DRTYPT     NPNTTTQQA H ++P
Subjt:  MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDMPAYPPGFTPQRSSSPRMGDRTYPTSFPAPNPNTTTQQAAHANNP

Query:  ISTLIMEGGKKISEEQGSRRRLEFLEERLRVIEGADICGDPSQIQ
        ISTLI EGGKKISEEQGSRRR+EFLEERLR IEGAD+ G     Q
Subjt:  ISTLIMEGGKKISEEQGSRRRLEFLEERLRVIEGADICGDPSQIQ

KAA0046607.1 Gag-pro-like protein [Cucumis melo var. makuwa]3.94e-8593.1Show/hide
Query:  MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDMPAYPPGFTPQRSSSPRMGDRTYPTSFPAPNPNTTTQQAAHANNP
        MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDMPAYPPGFTPQRSSSPRMGD TYPTSFPAPNPNTTTQQAAHANNP
Subjt:  MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDMPAYPPGFTPQRSSSPRMGDRTYPTSFPAPNPNTTTQQAAHANNP

Query:  ISTLIMEGGKKISEEQGSRRRLEFLEERLRVIEGADICGDPSQIQ
        IST IMEG KKISEEQGSRRRLEFLEERLRVIEGAD+ G     Q
Subjt:  ISTLIMEGGKKISEEQGSRRRLEFLEERLRVIEGADICGDPSQIQ

KAA0061241.1 uncharacterized protein E6C27_scaffold455G00760 [Cucumis melo var. makuwa]5.11e-7993.79Show/hide
Query:  MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDMPAYPPGFTPQRSSSPRMGDRTYPTSFPAPNPNTTTQQAAHANNP
        MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDMPAYPPGFTPQRSSSPRMGDRTYPTSFP PNPNTTTQQ AHANNP
Subjt:  MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDMPAYPPGFTPQRSSSPRMGDRTYPTSFPAPNPNTTTQQAAHANNP

Query:  ISTLIMEGGKKISEEQGSRRRLEFLEERLRVIEGADICGDPSQIQ
        ISTLIMEGGKKISEEQGSRRRLEFLEERLRVIEGAD+ G     Q
Subjt:  ISTLIMEGGKKISEEQGSRRRLEFLEERLRVIEGADICGDPSQIQ

KAA0065293.1 uncharacterized protein E6C27_scaffold1023G00060 [Cucumis melo var. makuwa]1.76e-7893.79Show/hide
Query:  MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDMPAYPPGFTPQRSSSPRMGDRTYPTSFPAPNPNTTTQQAAHANNP
        MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSV GTSSQVEVDLNQVLEDMP YPPGFTPQRSSSPRMGDRTYPTSFPAPNPNTTTQQAAHANNP
Subjt:  MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDMPAYPPGFTPQRSSSPRMGDRTYPTSFPAPNPNTTTQQAAHANNP

Query:  ISTLIMEGGKKISEEQGSRRRLEFLEERLRVIEGADICGDPSQIQ
        ISTLIMEGGKKISEEQGSRRRLEFLEERLRVIEGAD+ G     Q
Subjt:  ISTLIMEGGKKISEEQGSRRRLEFLEERLRVIEGADICGDPSQIQ

XP_008452348.1 PREDICTED: uncharacterized protein LOC103493407 [Cucumis melo]1.65e-7086.86Show/hide
Query:  MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDMPAYPPGFTPQRSSSPRMGDRTYPTSFPAPNPNTTTQQAAHANNP
        MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLED+ AYPP FTPQR SSPRM DRTYPTSFPAPNPNTTTQQAAH ++ 
Subjt:  MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDMPAYPPGFTPQRSSSPRMGDRTYPTSFPAPNPNTTTQQAAHANNP

Query:  ISTLIMEGGKKISEEQGSRRRLEFLEERLRVIEGADI
        IST I + GKKISEEQGSR+RLEFLEERL  IEG D+
Subjt:  ISTLIMEGGKKISEEQGSRRRLEFLEERLRVIEGADI

TrEMBL top hitse value%identityAlignment
A0A5A7SUT0 Reverse transcriptase6.1e-5895.24Show/hide
Query:  QVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDMPAYPPGFTPQRSSSPRMGDRTYPTSFPAPNPNTTTQQAAHANNPISTLIME
        Q   +RQDVEGLKDQLAKILELLTTGRGKSV GTSSQVEVDLNQVLEDMPAYPPGFTPQRSSSPRMGDRTYPTSFPAPNPNTTTQQ AHANNPISTLIME
Subjt:  QVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDMPAYPPGFTPQRSSSPRMGDRTYPTSFPAPNPNTTTQQAAHANNPISTLIME

Query:  GGKKISEEQGSRRRLEFLEERLRVIE
        GGKKISEEQGSRRRLEFLEERLRVIE
Subjt:  GGKKISEEQGSRRRLEFLEERLRVIE

A0A5A7TXF2 Gag-pro-like protein1.8e-6596.4Show/hide
Query:  MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDMPAYPPGFTPQRSSSPRMGDRTYPTSFPAPNPNTTTQQAAHANNP
        MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDMPAYPPGFTPQRSSSPRMGD TYPTSFPAPNPNTTTQQAAHANNP
Subjt:  MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDMPAYPPGFTPQRSSSPRMGDRTYPTSFPAPNPNTTTQQAAHANNP

Query:  ISTLIMEGGKKISEEQGSRRRLEFLEERLRVIEGADICG
        IST IMEG KKISEEQGSRRRLEFLEERLRVIEGAD+ G
Subjt:  ISTLIMEGGKKISEEQGSRRRLEFLEERLRVIEGADICG

A0A5A7V1Y8 Gag-pro-like protein1.3e-5586.86Show/hide
Query:  MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDMPAYPPGFTPQRSSSPRMGDRTYPTSFPAPNPNTTTQQAAHANNP
        MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLED+ AYPP FTPQR SSPRM DRTYPTSFPAPNPNTTTQQAAH ++ 
Subjt:  MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDMPAYPPGFTPQRSSSPRMGDRTYPTSFPAPNPNTTTQQAAHANNP

Query:  ISTLIMEGGKKISEEQGSRRRLEFLEERLRVIEGADI
        IST I + GKKISEEQGSR+RLEFLEERL  IEG D+
Subjt:  ISTLIMEGGKKISEEQGSRRRLEFLEERLRVIEGADI

A0A5A7V681 Retrotrans_gag domain-containing protein5.5e-6797.12Show/hide
Query:  MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDMPAYPPGFTPQRSSSPRMGDRTYPTSFPAPNPNTTTQQAAHANNP
        MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDMPAYPPGFTPQRSSSPRMGDRTYPTSFP PNPNTTTQQ AHANNP
Subjt:  MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDMPAYPPGFTPQRSSSPRMGDRTYPTSFPAPNPNTTTQQAAHANNP

Query:  ISTLIMEGGKKISEEQGSRRRLEFLEERLRVIEGADICG
        ISTLIMEGGKKISEEQGSRRRLEFLEERLRVIEGAD+ G
Subjt:  ISTLIMEGGKKISEEQGSRRRLEFLEERLRVIEGADICG

A0A5A7VAU5 Uncharacterized protein5.5e-6797.12Show/hide
Query:  MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDMPAYPPGFTPQRSSSPRMGDRTYPTSFPAPNPNTTTQQAAHANNP
        MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSV GTSSQVEVDLNQVLEDMP YPPGFTPQRSSSPRMGDRTYPTSFPAPNPNTTTQQAAHANNP
Subjt:  MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDMPAYPPGFTPQRSSSPRMGDRTYPTSFPAPNPNTTTQQAAHANNP

Query:  ISTLIMEGGKKISEEQGSRRRLEFLEERLRVIEGADICG
        ISTLIMEGGKKISEEQGSRRRLEFLEERLRVIEGAD+ G
Subjt:  ISTLIMEGGKKISEEQGSRRRLEFLEERLRVIEGADICG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGAGCAAACCAATGATCAGGTTCAAGCAGTTCGTCAAGACGTTGAAGGTCTGAAGGATCAATTGGCAAAAATCCTAGAATTGCTCACCACCGGAAGAGGAAAGAG
TGTTGCGGGGACTTCATCACAAGTGGAAGTGGATCTAAATCAGGTACTGGAGGACATGCCTGCATATCCTCCGGGTTTCACTCCTCAAAGGTCATCTAGTCCACGCATGG
GGGATAGGACGTATCCTACATCATTTCCCGCGCCAAATCCTAACACAACCACCCAACAAGCAGCCCATGCGAACAATCCTATATCAACTCTAATTATGGAAGGTGGTAAG
AAAATTTCAGAAGAGCAGGGTAGTAGGAGAAGACTGGAATTTCTAGAAGAAAGACTGCGCGTCATTGAAGGTGCAGACATATGTGGTGATCCCTCCCAAATTCAAGACTC
CAGATTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATGAGCAAACCAATGATCAGGTTCAAGCAGTTCGTCAAGACGTTGAAGGTCTGAAGGATCAATTGGCAAAAATCCTAGAATTGCTCACCACCGGAAGAGGAAAGAG
TGTTGCGGGGACTTCATCACAAGTGGAAGTGGATCTAAATCAGGTACTGGAGGACATGCCTGCATATCCTCCGGGTTTCACTCCTCAAAGGTCATCTAGTCCACGCATGG
GGGATAGGACGTATCCTACATCATTTCCCGCGCCAAATCCTAACACAACCACCCAACAAGCAGCCCATGCGAACAATCCTATATCAACTCTAATTATGGAAGGTGGTAAG
AAAATTTCAGAAGAGCAGGGTAGTAGGAGAAGACTGGAATTTCTAGAAGAAAGACTGCGCGTCATTGAAGGTGCAGACATATGTGGTGATCCCTCCCAAATTCAAGACTC
CAGATTTTGA
Protein sequenceShow/hide protein sequence
MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDMPAYPPGFTPQRSSSPRMGDRTYPTSFPAPNPNTTTQQAAHANNPISTLIMEGGK
KISEEQGSRRRLEFLEERLRVIEGADICGDPSQIQDSRF