; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0004422 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0004422
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptionleucine-rich repeat extensin-like protein 3
Genome locationchr06:6686482..6687025
RNA-Seq ExpressionIVF0004422
SyntenyIVF0004422
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060761.1 formin-like protein 3 [Cucumis melo var. makuwa]8.84e-100100Show/hide
Query:  MPSSAAILLSFSFLSLLLLLAHSQTSSPISIDPQNPDAEIKCGSCPCSNPCIQQLSPPPPPPPPPSPCTPTVSSRPPPPRFIYTMSSPAPPPPRFTYTTG
        MPSSAAILLSFSFLSLLLLLAHSQTSSPISIDPQNPDAEIKCGSCPCSNPCIQQLSPPPPPPPPPSPCTPTVSSRPPPPRFIYTMSSPAPPPPRFTYTTG
Subjt:  MPSSAAILLSFSFLSLLLLLAHSQTSSPISIDPQNPDAEIKCGSCPCSNPCIQQLSPPPPPPPPPSPCTPTVSSRPPPPRFIYTMSSPAPPPPRFTYTTG

Query:  VPGNLYEIDANNSWYYFSGTTGTRPGMAAVVVALGCGALHLMGFSKW
        VPGNLYEIDANNSWYYFSGTTGTRPGMAAVVVALGCGALHLMGFSKW
Subjt:  VPGNLYEIDANNSWYYFSGTTGTRPGMAAVVVALGCGALHLMGFSKW

KAE8650628.1 hypothetical protein Csa_011452 [Cucumis sativus]2.13e-8589.93Show/hide
Query:  MKMPSSAAILLSFSFLSLLLLLAHSQTSSPISIDPQNPDAEIKCGSCPCSNPCIQQLSPPPPPPPPP---SPCTPTVSSRPPPPRFIYTMSSPAPPPPRF
        MKM   AAILLSFSFLS LLLLA+SQTSSPI +DPQNPDAEIKCGSCPCSNPCIQQLSPPPPPPPPP   SPCTPTVSSRPPPPRFIYT SSPAPPPPRF
Subjt:  MKMPSSAAILLSFSFLSLLLLLAHSQTSSPISIDPQNPDAEIKCGSCPCSNPCIQQLSPPPPPPPPP---SPCTPTVSSRPPPPRFIYTMSSPAPPPPRF

Query:  TYTTGVPGNLYEIDANNSWYYFSGTTGTRPGMAAVVVALGCGALHLMGF
        TYTTGVPGNLYEIDANNSWYYFSGT  TRPGMAAV VA+GCGALHLMGF
Subjt:  TYTTGVPGNLYEIDANNSWYYFSGTTGTRPGMAAVVVALGCGALHLMGF

KAE8653002.1 hypothetical protein Csa_004575 [Cucumis sativus]5.92e-7189.92Show/hide
Query:  MKMPSSAAILLSFSFLSLLLLLAHSQTSSPISIDPQNPDAEIKCGSCPCSNPCIQQLSPPPPPPPPP---SPCTPTVSSRPPPPRFIYTMSSPAPPPPRF
        MKM   AAILLSFSFLS LLLLA+SQTSSPI +DPQNPDAEIKCGSCPCSNPCIQQLSPPPPPPPPP   SPCTPTVSSRPPPPRFIYT SSPAPPPPRF
Subjt:  MKMPSSAAILLSFSFLSLLLLLAHSQTSSPISIDPQNPDAEIKCGSCPCSNPCIQQLSPPPPPPPPP---SPCTPTVSSRPPPPRFIYTMSSPAPPPPRF

Query:  TYTTGVPGNLYEIDANNSWYYFSGTTGTR
        TYTTGVPGNLYEIDANNSWYYFSGT  TR
Subjt:  TYTTGVPGNLYEIDANNSWYYFSGTTGTR

XP_011651408.1 leucine-rich repeat extensin-like protein 3 [Cucumis sativus]4.95e-8990.13Show/hide
Query:  MKMPSSAAILLSFSFLSLLLLLAHSQTSSPISIDPQNPDAEIKCGSCPCSNPCIQQLSPPPPPPPPP---SPCTPTVSSRPPPPRFIYTMSSPAPPPPRF
        MKM   AAILLSFSFLS LLLLA+SQTSSPI +DPQNPDAEIKCGSCPCSNPCIQQLSPPPPPPPPP   SPCTPTVSSRPPPPRFIYT SSPAPPPPRF
Subjt:  MKMPSSAAILLSFSFLSLLLLLAHSQTSSPISIDPQNPDAEIKCGSCPCSNPCIQQLSPPPPPPPPP---SPCTPTVSSRPPPPRFIYTMSSPAPPPPRF

Query:  TYTTGVPGNLYEIDANNSWYYFSGTTGTRPGMAAVVVALGCGALHLMGFSKW
        TYTTGVPGNLYEIDANNSWYYFSGT  TRPGMAAV VA+GCGALHLMGFSKW
Subjt:  TYTTGVPGNLYEIDANNSWYYFSGTTGTRPGMAAVVVALGCGALHLMGFSKW

XP_023528316.1 leucine-rich repeat extensin-like protein 3 [Cucurbita pepo subsp. pepo]1.28e-6271.14Show/hide
Query:  MKMPSSAAILLSFSFLSLLLLLAHSQTSSPISIDPQNPDAEIKCGSCPCSNPCIQQLSPPPPPPPPPSPCTPTVSSRPPPPRFIYTMSSPAPPPPRFTYT
        MKM  SAAI LS SFL L L LA SQ  SP+  DPQ+P++EIKCGSCPCSNPC++Q  PPPPPPPPP+ C P +   PPPPRFIYT  SP PPPPRF YT
Subjt:  MKMPSSAAILLSFSFLSLLLLLAHSQTSSPISIDPQNPDAEIKCGSCPCSNPCIQQLSPPPPPPPPPSPCTPTVSSRPPPPRFIYTMSSPAPPPPRFTYT

Query:  TGVPGNLYEIDANNSWYYFSGTTGTRPGMAAVVVALGCGALHLMGFSKW
        TGVPGNLY+IDANN WYYFSGTT  RP  A +VVALGCGAL+LM F KW
Subjt:  TGVPGNLYEIDANNSWYYFSGTTGTRPGMAAVVVALGCGALHLMGFSKW

TrEMBL top hitse value%identityAlignment
A0A0A0L7R0 Uncharacterized protein1.4e-6790.13Show/hide
Query:  MKMPSSAAILLSFSFLSLLLLLAHSQTSSPISIDPQNPDAEIKCGSCPCSNPCIQQLS---PPPPPPPPPSPCTPTVSSRPPPPRFIYTMSSPAPPPPRF
        MKM   AAILLSFSFLS LLLLA+SQTSSPI +DPQNPDAEIKCGSCPCSNPCIQQLS   PPPPPPPPPSPCTPTVSSRPPPPRFIYT SSPAPPPPRF
Subjt:  MKMPSSAAILLSFSFLSLLLLLAHSQTSSPISIDPQNPDAEIKCGSCPCSNPCIQQLS---PPPPPPPPPSPCTPTVSSRPPPPRFIYTMSSPAPPPPRF

Query:  TYTTGVPGNLYEIDANNSWYYFSGTTGTRPGMAAVVVALGCGALHLMGFSKW
        TYTTGVPGNLYEIDANNSWYYFSGT  TRPGMAAV VA+GCGALHLMGFSKW
Subjt:  TYTTGVPGNLYEIDANNSWYYFSGTTGTRPGMAAVVVALGCGALHLMGFSKW

A0A5A7V4T2 Formin-like protein 31.1e-75100Show/hide
Query:  MPSSAAILLSFSFLSLLLLLAHSQTSSPISIDPQNPDAEIKCGSCPCSNPCIQQLSPPPPPPPPPSPCTPTVSSRPPPPRFIYTMSSPAPPPPRFTYTTG
        MPSSAAILLSFSFLSLLLLLAHSQTSSPISIDPQNPDAEIKCGSCPCSNPCIQQLSPPPPPPPPPSPCTPTVSSRPPPPRFIYTMSSPAPPPPRFTYTTG
Subjt:  MPSSAAILLSFSFLSLLLLLAHSQTSSPISIDPQNPDAEIKCGSCPCSNPCIQQLSPPPPPPPPPSPCTPTVSSRPPPPRFIYTMSSPAPPPPRFTYTTG

Query:  VPGNLYEIDANNSWYYFSGTTGTRPGMAAVVVALGCGALHLMGFSKW
        VPGNLYEIDANNSWYYFSGTTGTRPGMAAVVVALGCGALHLMGFSKW
Subjt:  VPGNLYEIDANNSWYYFSGTTGTRPGMAAVVVALGCGALHLMGFSKW

A0A6J1BC02 probable pathogenesis-related protein ARB_028615.2e-1754.05Show/hide
Query:  PQNPDAEIKCGSCPCSNPCIQQLSPPPPPPPPPSPCTPTVSSRPPPPRFIYTMSSP-APPPPRFTYTTGVPGNLYEIDANNSWYYFSGTTGTRPGMAAVV
        PQ P  EIKCG+CPC NPC QQ S PPPPPPPPSP        PPPPRFIY    P  PPPPRF Y TGVPG LY  DA++ W +FS  +  R  +  ++
Subjt:  PQNPDAEIKCGSCPCSNPCIQQLSPPPPPPPPPSPCTPTVSSRPPPPRFIYTMSSP-APPPPRFTYTTGVPGNLYEIDANNSWYYFSGTTGTRPGMAAVV

Query:  VALGCGALHLM
        ++ G G L L+
Subjt:  VALGCGALHLM

A0A6J1GAW3 leucine-rich repeat extensin-like protein 21.2e-2655.7Show/hide
Query:  MPSSAAILLSFSFLSLLLLLAHSQTSSPISIDPQNPDAEIKCGSCP-CSNPCIQQLSPPPPPPPPPSPCTPTVSSRPPPPRFIYTMSSPAPPPPRFTYTT
        M  SAAI LS       LLL+  QTS PIS  P +PD EI C S   CSNP +QQL P PP PPPP           PPPRF YT  S  PPP RF YTT
Subjt:  MPSSAAILLSFSFLSLLLLLAHSQTSSPISIDPQNPDAEIKCGSCP-CSNPCIQQLSPPPPPPPPPSPCTPTVSSRPPPPRFIYTMSSPAPPPPRFTYTT

Query:  GVPGNLYEIDANNSWYYFSGTTGTRPGMAA-VVVALGCGALHLMGFSKW
        GVP +LY+ D  N WYYFSG  G  P MAA VVV L CGAL L+ F KW
Subjt:  GVPGNLYEIDANNSWYYFSGTTGTRPGMAA-VVVALGCGALHLMGFSKW

A0A6J1J7W0 probable pathogenesis-related protein ARB_028618.5e-4469.39Show/hide
Query:  MPSSAAILLSFSFLSLLLLLAHSQTSSPISIDPQNPDAEIKCGSCPCSNPCIQQLSPPPPPPPPPSPCTPTVSSRPPPPRFIYTMSSPAPPPPRFTYTTG
        M  SAAI LS SFL L L LA+SQ  SP  +DPQ+P++EIKCGSCPCSNPC++Q   PPPPPPPP  C P +   PPPPRFIYT  SP PPPPRF YTTG
Subjt:  MPSSAAILLSFSFLSLLLLLAHSQTSSPISIDPQNPDAEIKCGSCPCSNPCIQQLSPPPPPPPPPSPCTPTVSSRPPPPRFIYTMSSPAPPPPRFTYTTG

Query:  VPGNLYEIDANNSWYYFSGTTGTRPGMAAVVVALGCGALHLMGFSKW
        VPGNLY+IDANN WYYFSGTT      AA+VVALGCGAL+LM F KW
Subjt:  VPGNLYEIDANNSWYYFSGTTGTRPGMAAVVVALGCGALHLMGFSKW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G02405.1 proline-rich family protein4.5e-0539.42Show/hide
Query:  LSLLLLLAHSQTSSPISIDPQNPDAEIKCGSCPCSNPCIQQLSPPPPPPPPPSPCTPT-VSSRPPPPRFIYTMSSPAPPPPR-------FTYTTGVPGNL
        L+  +L+A    +SPI I+ ++  AE+     PC      Q  PPPPP PPP  CTP+     PPPP+      SP PPPP        FTY    PG+L
Subjt:  LSLLLLLAHSQTSSPISIDPQNPDAEIKCGSCPCSNPCIQQLSPPPPPPPPPSPCTPT-VSSRPPPPRFIYTMSSPAPPPPR-------FTYTTGVPGNL

Query:  YEID
        Y I+
Subjt:  YEID

AT1G70990.1 proline-rich family protein1.7e-0436.94Show/hide
Query:  SAAILLSFSFLSLLLLL--AHSQTSSPISIDPQNPDAEIKCGSCPCSNPCIQQL---SPPPPPPPPPSPCTPTVSSRPPPPRFIYTMSSPAPPPPRFTYT
        +A +L +  FL+  +++  + S T+  +  DP      IKC       PC+Q +   SPPPP PPPPS   P     P PP+  Y      PPP  + Y 
Subjt:  SAAILLSFSFLSLLLLL--AHSQTSSPISIDPQNPDAEIKCGSCPCSNPCIQQL---SPPPPPPPPPSPCTPTVSSRPPPPRFIYTMSSPAPPPPRFTYT

Query:  TGVPGNLYEID
        TG PG LY ID
Subjt:  TGVPGNLYEID

AT3G03350.1 NAD(P)-binding Rossmann-fold superfamily protein1.4e-0651.02Show/hide
Query:  TVSSRPPPPRFIY-TMSSPAPPPPRFTYTTGVPGNLYEIDANNSWYYFS
        T   RPPPPR  Y + SS +PPPP++ Y TGVPG LY  + ++ W Y S
Subjt:  TVSSRPPPPRFIY-TMSSPAPPPPRFTYTTGVPGNLYEIDANNSWYYFS

AT3G03350.2 NAD(P)-binding Rossmann-fold superfamily protein5.7e-0840.85Show/hide
Query:  TVSSRPPPPRFIY-TMSSPAPPPPRFTYTTGVPGNLYEIDANNSWYYFSGTTGTRPGMAAVVVALGCGALH
        T   RPPPPR  Y + SS +PPPP++ Y TGVPG LY  + ++ W Y S           V+V +G G ++
Subjt:  TVSSRPPPPRFIY-TMSSPAPPPPRFTYTTGVPGNLYEIDANNSWYYFSGTTGTRPGMAAVVVALGCGALH

AT3G22800.1 Leucine-rich repeat (LRR) family protein1.7e-0444.12Show/hide
Query:  IKCGSCPCSNPCIQQLSPPPPPPPPPSPCTPTVSSRPPPPRFIYTMSSPAPP-PPRFTYTTGVPGNLY
        I C S  CS P      PPPPPPPPP P  P     PPPP ++Y    P PP PP + Y    P  +Y
Subjt:  IKCGSCPCSNPCIQQLSPPPPPPPPPSPCTPTVSSRPPPPRFIYTMSSPAPP-PPRFTYTTGVPGNLY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAATGCCCTCTTCCGCCGCCATTTTACTCTCCTTTTCTTTCCTCTCCCTCCTCCTTCTTCTCGCCCACTCTCAAACCTCCTCCCCGATATCAATAGATCCTCAAAA
TCCCGACGCTGAGATCAAATGTGGATCATGCCCTTGTTCCAATCCATGTATTCAACAACTATCACCGCCACCGCCACCGCCACCGCCTCCTTCTCCTTGTACCCCAACGG
TGTCCTCTCGACCACCGCCTCCTAGGTTTATTTATACTATGTCATCACCTGCACCACCGCCTCCAAGGTTTACTTACACGACGGGTGTTCCCGGTAATTTATACGAGATT
GATGCGAATAATAGCTGGTATTACTTCTCTGGCACGACGGGGACGCGACCTGGCATGGCGGCGGTTGTGGTGGCGCTTGGCTGTGGAGCTTTGCATCTAATGGGGTTTAG
TAAGTGGTGA
mRNA sequenceShow/hide mRNA sequence
CCCGCCAACTCAATCCTCATCGATTTTAGAGCTTTTCCCATTACATGAAAATGCCCTCTTCCGCCGCCATTTTACTCTCCTTTTCTTTCCTCTCCCTCCTCCTTCTTCTC
GCCCACTCTCAAACCTCCTCCCCGATATCAATAGATCCTCAAAATCCCGACGCTGAGATCAAATGTGGATCATGCCCTTGTTCCAATCCATGTATTCAACAACTATCACC
GCCACCGCCACCGCCACCGCCTCCTTCTCCTTGTACCCCAACGGTGTCCTCTCGACCACCGCCTCCTAGGTTTATTTATACTATGTCATCACCTGCACCACCGCCTCCAA
GGTTTACTTACACGACGGGTGTTCCCGGTAATTTATACGAGATTGATGCGAATAATAGCTGGTATTACTTCTCTGGCACGACGGGGACGCGACCTGGCATGGCGGCGGTT
GTGGTGGCGCTTGGCTGTGGAGCTTTGCATCTAATGGGGTTTAGTAAGTGGTGAAGGATGAATAGCCATATAAAGAAAATTATTGATTAATGTGTTGAATTTGG
Protein sequenceShow/hide protein sequence
MKMPSSAAILLSFSFLSLLLLLAHSQTSSPISIDPQNPDAEIKCGSCPCSNPCIQQLSPPPPPPPPPSPCTPTVSSRPPPPRFIYTMSSPAPPPPRFTYTTGVPGNLYEI
DANNSWYYFSGTTGTRPGMAAVVVALGCGALHLMGFSKW