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IVF0004430 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0004430
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGag/pol protein
Genome locationchr10:13566889..13567158
RNA-Seq ExpressionIVF0004430
SyntenyIVF0004430
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0067084.1 gag/pol protein [Cucumis melo var. makuwa]2.07e-49100Show/hide
Query:  MKTVRGRTIGGRLGWADGRMTVGGRLNWALRTSTVGGRQIMDEEKSGLECGTPIGGEKQIRSEVRESDVEDGRRQATAQMKGVEKLGML
        MKTVRGRTIGGRLGWADGRMTVGGRLNWALRTSTVGGRQIMDEEKSGLECGTPIGGEKQIRSEVRESDVEDGRRQATAQMKGVEKLGML
Subjt:  MKTVRGRTIGGRLGWADGRMTVGGRLNWALRTSTVGGRQIMDEEKSGLECGTPIGGEKQIRSEVRESDVEDGRRQATAQMKGVEKLGML
TYK26319.1 gag/pol protein [Cucumis melo var. makuwa]2.16e-49100Show/hide
Query:  MKTVRGRTIGGRLGWADGRMTVGGRLNWALRTSTVGGRQIMDEEKSGLECGTPIGGEKQIRSEVRESDVEDGRRQATAQMKGVEKLGML
        MKTVRGRTIGGRLGWADGRMTVGGRLNWALRTSTVGGRQIMDEEKSGLECGTPIGGEKQIRSEVRESDVEDGRRQATAQMKGVEKLGML
Subjt:  MKTVRGRTIGGRLGWADGRMTVGGRLNWALRTSTVGGRQIMDEEKSGLECGTPIGGEKQIRSEVRESDVEDGRRQATAQMKGVEKLGML
TrEMBL top hitse value%identityAlignment
A0A5A7VI97 Gag/pol protein2.4e-41100Show/hide
Query:  MKTVRGRTIGGRLGWADGRMTVGGRLNWALRTSTVGGRQIMDEEKSGLECGTPIGGEKQIRSEVRESDVEDGRRQATAQMKGVEKLGML
        MKTVRGRTIGGRLGWADGRMTVGGRLNWALRTSTVGGRQIMDEEKSGLECGTPIGGEKQIRSEVRESDVEDGRRQATAQMKGVEKLGML
Subjt:  MKTVRGRTIGGRLGWADGRMTVGGRLNWALRTSTVGGRQIMDEEKSGLECGTPIGGEKQIRSEVRESDVEDGRRQATAQMKGVEKLGML
A0A5D3DS88 Gag/pol protein2.4e-41100Show/hide
Query:  MKTVRGRTIGGRLGWADGRMTVGGRLNWALRTSTVGGRQIMDEEKSGLECGTPIGGEKQIRSEVRESDVEDGRRQATAQMKGVEKLGML
        MKTVRGRTIGGRLGWADGRMTVGGRLNWALRTSTVGGRQIMDEEKSGLECGTPIGGEKQIRSEVRESDVEDGRRQATAQMKGVEKLGML
Subjt:  MKTVRGRTIGGRLGWADGRMTVGGRLNWALRTSTVGGRQIMDEEKSGLECGTPIGGEKQIRSEVRESDVEDGRRQATAQMKGVEKLGML
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGACCGTGCGTGGAAGGACGATTGGTGGAAGATTGGGCTGGGCGGACGGACGGATGACTGTCGGTGGAAGATTGAACTGGGCGCTCAGAACTTCGACCGTGGGCGG
AAGACAAATCATGGATGAAGAGAAATCGGGGCTGGAGTGCGGAACTCCAATCGGGGGTGAAAAACAAATCAGGTCGGAAGTGCGTGAGTCAGACGTAGAAGATGGAAGGA
GACAGGCGACCGCGCAAATGAAAGGGGTTGAGAAATTAGGGATGTTATGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGACCGTGCGTGGAAGGACGATTGGTGGAAGATTGGGCTGGGCGGACGGACGGATGACTGTCGGTGGAAGATTGAACTGGGCGCTCAGAACTTCGACCGTGGGCGG
AAGACAAATCATGGATGAAGAGAAATCGGGGCTGGAGTGCGGAACTCCAATCGGGGGTGAAAAACAAATCAGGTCGGAAGTGCGTGAGTCAGACGTAGAAGATGGAAGGA
GACAGGCGACCGCGCAAATGAAAGGGGTTGAGAAATTAGGGATGTTATGA
Protein sequenceShow/hide protein sequence
MKTVRGRTIGGRLGWADGRMTVGGRLNWALRTSTVGGRQIMDEEKSGLECGTPIGGEKQIRSEVRESDVEDGRRQATAQMKGVEKLGML