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IVF0004461 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0004461
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description40S ribosomal protein S16
Genome locationchr06:3766440..3766873
RNA-Seq ExpressionIVF0004461
SyntenyIVF0004461
Gene Ontology termsGO:0000462 - maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (biological process)
GO:0006412 - translation (biological process)
GO:0022627 - cytosolic small ribosomal subunit (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR000754 - Ribosomal protein S9
IPR014721 - Ribosomal protein S5 domain 2-type fold, subgroup
IPR020568 - Ribosomal protein S5 domain 2-type fold
IPR020574 - Ribosomal protein S9, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8645860.1 hypothetical protein Csa_017052 [Cucumis sativus]1.54e-8893.06Show/hide
Query:  MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKY---
        MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKY   
Subjt:  MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKY---

Query:  -------DILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR
               DILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR
Subjt:  -------DILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR

XP_004136973.1 40S ribosomal protein S16 [Cucumis sativus]2.90e-8993.06Show/hide
Query:  MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKY---
        MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKY   
Subjt:  MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKY---

Query:  -------DILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR
               DILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR
Subjt:  -------DILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR

XP_022149351.1 40S ribosomal protein S16-like [Momordica charantia]4.13e-8992.36Show/hide
Query:  MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKY---
        MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIEL+EPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKY   
Subjt:  MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKY---

Query:  -------DILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR
               DILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR
Subjt:  -------DILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR

XP_022989000.1 40S ribosomal protein S16-like [Cucurbita maxima]8.33e-8992.36Show/hide
Query:  MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKY---
        MA+PIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKY   
Subjt:  MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKY---

Query:  -------DILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR
               DILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR
Subjt:  -------DILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR

XP_040987369.1 40S ribosomal protein S16 [Juglans microcarpa x Juglans regia]1.18e-8891.67Show/hide
Query:  MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKY---
        MAAP+ESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRF+GVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKY   
Subjt:  MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKY---

Query:  -------DILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR
               DILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR
Subjt:  -------DILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR

TrEMBL top hitse value%identityAlignment
A0A0A0L6F6 Uncharacterized protein1.3e-6793.06Show/hide
Query:  MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKY---
        MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKY   
Subjt:  MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKY---

Query:  -------DILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR
               DILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR
Subjt:  -------DILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR

A0A1S3C210 40S ribosomal protein S161.3e-6793.06Show/hide
Query:  MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKY---
        MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKY   
Subjt:  MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKY---

Query:  -------DILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR
               DILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR
Subjt:  -------DILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR

A0A6J1D637 40S ribosomal protein S161.3e-6793.06Show/hide
Query:  MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKY---
        MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKY   
Subjt:  MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKY---

Query:  -------DILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR
               DILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR
Subjt:  -------DILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR

A0A6J1FW85 40S ribosomal protein S16-like1.3e-6793.06Show/hide
Query:  MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKY---
        MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKY   
Subjt:  MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKY---

Query:  -------DILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR
               DILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR
Subjt:  -------DILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR

A0A6J1J781 40S ribosomal protein S16-like1.3e-6793.06Show/hide
Query:  MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKY---
        MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKY   
Subjt:  MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKY---

Query:  -------DILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR
               DILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR
Subjt:  -------DILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR

SwissProt top hitse value%identityAlignment
O22647 40S ribosomal protein S161.8e-6182.76Show/hide
Query:  MAAP-IESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKY--
        MA P  ESVQCFGRKKTAVAVT+CKRGRGLIK+NG PIELV+PEILR+KA+EPILLLGRHRF GVDMRIRV+GGG TSQIYAIRQSIAKALVA+YQKY  
Subjt:  MAAP-IESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKY--

Query:  --------DILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR
                DIL+RYDRTLLVADPRRCEPKKFGGRGAR+RFQKSYR
Subjt:  --------DILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR

P46293 40S ribosomal protein S162.9e-6489.29Show/hide
Query:  IESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKY-------
        IESVQCFGRKKTAVAVT+CKRGRGLIKINGCPIELVEPEILRFKA EPILLLGR RF+GVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKY       
Subjt:  IESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKY-------

Query:  ---DILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR
           DILV YDRTLLVADPRRCEPKKFGGRGARARFQKSYR
Subjt:  ---DILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR

Q42340 40S ribosomal protein S16-38.7e-6181.29Show/hide
Query:  ESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKY--------
        ESVQCFGRKKTAVAVT+CKRG GLIK+NGCPIEL +PEILRFK +EP+LLLG+HRF+GV+MRIRV GGGHTSQ+YAIRQSIAKALVA+YQKY        
Subjt:  ESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKY--------

Query:  --DILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR
          DILVRYDRTLLVADPRRCEPKKFGGRGAR+R+QKSYR
Subjt:  --DILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR

Q9SK22 40S ribosomal protein S16-16.7e-6182.01Show/hide
Query:  ESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKY--------
        ESVQCFGRKKTAVAVT+CKRG GLIK+NGCPIEL +PEILRFK +EPILLLG+HRF+GV+MRIRV GGGHTSQ+YAIRQSIAKALVA+YQKY        
Subjt:  ESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKY--------

Query:  --DILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR
          DILVRYDRTLLVADPRRCEPKKFGGRGAR+R+QKSYR
Subjt:  --DILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR

Q9XEK7 40S ribosomal protein S164.0e-5878.87Show/hide
Query:  APIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKY-----
        A +ESVQCFGRKKTAVAVTYC+RGRGLI++   PIELVEPEILR+KA+EP+LLLGR +F+GVDMRIRVKGGG+TSQIYAIRQSIAKALVA++QKY     
Subjt:  APIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKY-----

Query:  -----DILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR
             D+L+RYDRTLLVADPRRCEPKKFGGRGAR+RFQKSYR
Subjt:  -----DILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR

Arabidopsis top hitse value%identityAlignment
AT2G09990.1 Ribosomal protein S5 domain 2-like superfamily protein4.7e-6282.01Show/hide
Query:  ESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKY--------
        ESVQCFGRKKTAVAVT+CKRG GLIK+NGCPIEL +PEILRFK +EPILLLG+HRF+GV+MRIRV GGGHTSQ+YAIRQSIAKALVA+YQKY        
Subjt:  ESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKY--------

Query:  --DILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR
          DILVRYDRTLLVADPRRCEPKKFGGRGAR+R+QKSYR
Subjt:  --DILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR

AT3G04230.1 Ribosomal protein S5 domain 2-like superfamily protein5.4e-5877.7Show/hide
Query:  ESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKY--------
        ESVQCFGRKKTA AVTYCKRG G+IK+NG PIEL +PEILRFK +EP+LLLG+HRF+GVDMRIR  GGG+TS++YAIRQSIAKALVA+YQKY        
Subjt:  ESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKY--------

Query:  --DILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR
          DIL+RYDRTLLVADPRRCE KKFGG GARARFQKSYR
Subjt:  --DILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR

AT5G18380.1 Ribosomal protein S5 domain 2-like superfamily protein6.2e-6281.29Show/hide
Query:  ESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKY--------
        ESVQCFGRKKTAVAVT+CKRG GLIK+NGCPIEL +PEILRFK +EP+LLLG+HRF+GV+MRIRV GGGHTSQ+YAIRQSIAKALVA+YQKY        
Subjt:  ESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKY--------

Query:  --DILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR
          DILVRYDRTLLVADPRRCEPKKFGGRGAR+R+QKSYR
Subjt:  --DILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR

AT5G18380.2 Ribosomal protein S5 domain 2-like superfamily protein3.4e-5278.4Show/hide
Query:  ESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKY--------
        ESVQCFGRKKTAVAVT+CKRG GLIK+NGCPIEL +PEILRFK +EP+LLLG+HRF+GV+MRIRV GGGHTSQ+YAIRQSIAKALVA+YQKY        
Subjt:  ESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKY--------

Query:  --DILVRYDRTLLVADPRRCEPKKF
          DILVRYDRTLLVADPRRCE  +F
Subjt:  --DILVRYDRTLLVADPRRCEPKKF

AT5G18380.3 Ribosomal protein S5 domain 2-like superfamily protein2.9e-4376.85Show/hide
Query:  ESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKY--------
        ESVQCFGRKKTAVAVT+CKRG GLIK+NGCPIEL +PEILRFK +EP+LLLG+HRF+GV+MRIRV GGGHTSQ+YAIRQSIAKALVA+YQKY        
Subjt:  ESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKY--------

Query:  --DILVRY
          DILVR+
Subjt:  --DILVRY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGCTCCAATCGAGTCTGTGCAATGCTTCGGCCGGAAGAAGACCGCAGTTGCTGTAACATACTGCAAGCGCGGCCGAGGCTTGATCAAGATCAACGGCTGCCCAAT
CGAGCTCGTCGAACCTGAGATCTTACGCTTCAAGGCCTACGAACCCATCCTCCTTCTCGGCCGACACCGCTTCTCCGGCGTCGACATGCGAATCAGAGTCAAAGGCGGAG
GCCACACCTCACAGATCTACGCTATCCGCCAGAGCATCGCTAAGGCTCTCGTTGCCTTTTACCAGAAGTACGACATTCTCGTTCGCTACGATCGGACTTTGCTCGTCGCT
GATCCTAGACGCTGTGAGCCGAAGAAGTTTGGTGGTCGTGGAGCTCGTGCTAGATTCCAGAAATCATATCGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGCTCCAATCGAGTCTGTGCAATGCTTCGGCCGGAAGAAGACCGCAGTTGCTGTAACATACTGCAAGCGCGGCCGAGGCTTGATCAAGATCAACGGCTGCCCAAT
CGAGCTCGTCGAACCTGAGATCTTACGCTTCAAGGCCTACGAACCCATCCTCCTTCTCGGCCGACACCGCTTCTCCGGCGTCGACATGCGAATCAGAGTCAAAGGCGGAG
GCCACACCTCACAGATCTACGCTATCCGCCAGAGCATCGCTAAGGCTCTCGTTGCCTTTTACCAGAAGTACGACATTCTCGTTCGCTACGATCGGACTTTGCTCGTCGCT
GATCCTAGACGCTGTGAGCCGAAGAAGTTTGGTGGTCGTGGAGCTCGTGCTAGATTCCAGAAATCATATCGTTGA
Protein sequenceShow/hide protein sequence
MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYDILVRYDRTLLVA
DPRRCEPKKFGGRGARARFQKSYR