CuGenDBv2

Gene ID	IVF0004488
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	DNA topoisomerase
Genome location	chr04:2407929..2412545
RNA-Seq Expression	IVF0004488
Synteny	IVF0004488
Gene Ontology terms	GO:0006265 - DNA topological change (biological process) GO:0005694 - chromosome (cellular component) GO:0003677 - DNA binding (molecular function) GO:0046872 - metal ion binding (molecular function) GO:0003917 - DNA topoisomerase type I activity (molecular function)
InterPro domains	IPR005733 - DNA topoisomerase I, bacterial-type IPR034149 - DNA topoisomerase 1, TOPRIM domain IPR023406 - DNA topoisomerase, type IA, active site IPR023405 - DNA topoisomerase, type IA, core domain IPR013826 - DNA topoisomerase, type IA, central region, subdomain 3 IPR013825 - DNA topoisomerase, type IA, central region, subdomain 2 IPR013824 - DNA topoisomerase, type IA, central region, subdomain 1 IPR013497 - DNA topoisomerase, type IA, central IPR006171 - TOPRIM domain IPR003602 - DNA topoisomerase, type IA, DNA-binding domain IPR003601 - DNA topoisomerase, type IA, domain 2 IPR000380 - DNA topoisomerase, type IA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0038737.1 DNA topoisomerase 1 isoform X2 [Cucumis melo var. makuwa]

0.0

99.43

Show/hide

Query:  MSQLQRSLLFASSSTNAISSSVFSTAPSASSCSRLRPFTTKLQGSNLQNYTSKCIPVLPFPTACSSARCSQLVFRKGGVTFAVKTVRAKAGPSVFTLYSR
        MSQLQRSLLFASSSTNAISSSVFSTAPSASSCSRLRPFTTKLQGSNLQNYTSKCIPVLPFPTACSSARCSQLVFRKGGVTFAVKTVRAKAGPSVFTLYSR
Subjt:  MSQLQRSLLFASSSTNAISSSVFSTAPSASSCSRLRPFTTKLQGSNLQNYTSKCIPVLPFPTACSSARCSQLVFRKGGVTFAVKTVRAKAGPSVFTLYSR

Query:  LPLRFPHSAASPNASNQQLLNGTFTHKPPNYRAFGRKFFSNTTEANSSNQLVGATKEANLVSSSSSSSIRKTSKGLNEKKSSSKKKKEAISSANGNVEAV
        LPLRFPHSAASPNASNQQLLNGTFTHKPPNYRAFGRKFFSNTTEANSSNQLVGATKEANLVSSSSSSSIRKTSKGLNEKKSSSKKKKEAISSANGNVEAV
Subjt:  LPLRFPHSAASPNASNQQLLNGTFTHKPPNYRAFGRKFFSNTTEANSSNQLVGATKEANLVSSSSSSSIRKTSKGLNEKKSSSKKKKEAISSANGNVEAV

Query:  CKDGQSMSFDSSSTDLDVVQDPKKNVTESSSKDSASTQQQPNKKKRNSSRKKEVSKDTNKLPQEANVVFDAKWTSQGRTSFKQLYPPMGKSVMVVESVTK
        CKDGQSMSFDSSSTDLDVVQDPKKNVTESSSKDSASTQQQPNKKKRNSSRKKEVSKDTNKLPQEANVVFDAKWTSQGRTSFKQLYPPMGKSVMVVESVTK
Subjt:  CKDGQSMSFDSSSTDLDVVQDPKKNVTESSSKDSASTQQQPNKKKRNSSRKKEVSKDTNKLPQEANVVFDAKWTSQGRTSFKQLYPPMGKSVMVVESVTK

Query:  AKVIQNYLGDMFVVLPSHGHVRDLAAKSGSVRPDDDFSMVWEVPSAAYTHLKNMKVSLNGAENLILASDPDREGEAIAWHIIEMLQHEDALHEGISIARV
        AKVIQNYLGDMFVVLPSHGHVRDLAAKSGSVRPDDDFSMVWEVPSAAYTHLKNMKVSLNGAENLILASDPDREGEAIAWHIIEMLQHEDALHEGISIARV
Subjt:  AKVIQNYLGDMFVVLPSHGHVRDLAAKSGSVRPDDDFSMVWEVPSAAYTHLKNMKVSLNGAENLILASDPDREGEAIAWHIIEMLQHEDALHEGISIARV

Query:  VFHEITEASIKSALQSPRVIDANLVQAYLARRALDYLIGFNISPLLWRKLPGCRSAGRVQSAALALICDREMEIDEFHAQEYWTIDIKLNQKDTCSSVED
        VFHEITEASIKSALQSPRVIDANLVQAYLARRALDYLIGFNISPLLWRKLPGCRSAGRVQSAALALICDREMEIDEFHAQEYWTIDIKLNQKDTCSSVED
Subjt:  VFHEITEASIKSALQSPRVIDANLVQAYLARRALDYLIGFNISPLLWRKLPGCRSAGRVQSAALALICDREMEIDEFHAQEYWTIDIKLNQKDTCSSVED

Query:  FAVPAHLTHFDSKKLNQFAISSNMEAKNIESVLKSVNFQVLSSKKNKVRRNPPMPYITSTLQQDAASKFNFSTTYTMQVAQKLYEGIQLADGKAAGLITY
        FAVPAHLTHFDSKKLNQFAISSNMEAKNIESVLKSVNFQVLSSKKNKVRRNPPMPYITSTLQQDAASKFNFSTTYTMQVAQKLYEGIQLADGKAAGLITY
Subjt:  FAVPAHLTHFDSKKLNQFAISSNMEAKNIESVLKSVNFQVLSSKKNKVRRNPPMPYITSTLQQDAASKFNFSTTYTMQVAQKLYEGIQLADGKAAGLITY

Query:  LRTDGLHISDEAVKDIRSLIMQRYGKDFVPESGPKYFKKVKNAQEAHEAIRPTDVQRLPSMLVGILDEDSHKLYSLIWLRTVACQMESSITEQVRMH
        LRTDGLHISDEAVKDIRSLIMQRYGKDFVPESGPKYFKKVKNAQEAHEAIRPTDVQRLPSMLVGILDEDSHKLYSLIWLRTVACQMESSITEQ+++ 
Subjt:  LRTDGLHISDEAVKDIRSLIMQRYGKDFVPESGPKYFKKVKNAQEAHEAIRPTDVQRLPSMLVGILDEDSHKLYSLIWLRTVACQMESSITEQVRMH

KAA0038738.1 DNA topoisomerase 1 isoform X1 [Cucumis melo var. makuwa]

0.0

72.76

Show/hide

Query:  MSQLQRSLLFASSSTNAISSSVFSTAPSASSCSRLRPFTTKLQGSNLQNYTSKCIPVLPFPTACSSARCSQLVFRKGGVTFAVKTVRAKAG-------PS
        MSQLQRSL  ASSS+NAISSSVFSTA SA S SRLR F+TKLQGS LQNYTSKCIPVLPFPTACSSARCSQL+FRKGGVTFAVKT RAKAG       PS
Subjt:  MSQLQRSLLFASSSTNAISSSVFSTAPSASSCSRLRPFTTKLQGSNLQNYTSKCIPVLPFPTACSSARCSQLVFRKGGVTFAVKTVRAKAG-------PS

Query:  VFTLYSRLPLRFPHSAASPNASNQQLLNGTFTHKPPNYRAFGRKFFSNTTEA------------------------------------------------
        VFTLYSRLPLRFPHSAASPNASNQQLLN TFTHK PNYRAFGRKFFSNTTEA                                                
Subjt:  VFTLYSRLPLRFPHSAASPNASNQQLLNGTFTHKPPNYRAFGRKFFSNTTEA------------------------------------------------

Query:  -------NSSNQLVGATKEANLVSSSSSSSIRKTSKGLNEKKSSSKKKKEAISSAN--------------------------------------------
               NSS+QLVGATKEANLVSS+SSSSIR+ SKGLNEKKS SKKKK+AISS N                                            
Subjt:  -------NSSNQLVGATKEANLVSSSSSSSIRKTSKGLNEKKSSSKKKKEAISSAN--------------------------------------------

Query:  --------------------GNVEAVCKDGQSMSFDSSSTDLDVVQDPKKNVTESSSKDSASTQQQPNKKKRNSSRKKEVSKDTNKLPQEANVVFDAKWT
                             +VEAVCKDGQS SF SS+TD DVVQDPKKNVT+ +SKDS ST+QQ NKKK NSSR KE +K  NKL Q+ NV+ D + T
Subjt:  --------------------GNVEAVCKDGQSMSFDSSSTDLDVVQDPKKNVTESSSKDSASTQQQPNKKKRNSSRKKEVSKDTNKLPQEANVVFDAKWT

Query:  SQGRTSFKQLYPPMGKSVMVVESVTKAKVIQNYLGDMFVVLPSHGHVRDLAAKSGSVRPDDDFSMVWEVPSAAYTHLKNMKVSLNGAENLILASDPDREG
        SQG+T+FKQLYPPMGKSV+VVESVTKAKVIQ+YLGDMFVVLPSHGHVRDLAA+SGSVRP+DDF MVWEVPSAA+THLK++++SLNGAENLILASDPD+EG
Subjt:  SQGRTSFKQLYPPMGKSVMVVESVTKAKVIQNYLGDMFVVLPSHGHVRDLAAKSGSVRPDDDFSMVWEVPSAAYTHLKNMKVSLNGAENLILASDPDREG

Query:  EAIAWHIIEMLQHEDALHEGISIARVVFHEITEASIKSALQSPRVIDANLVQAYLARRALDYLIGFNISPLLWRKLPGCRSAGRVQSAALALICDREMEI
        EAIAWHIIEMLQH+ ALHEGISIARVVFHEITEASIKSALQSPRVID NLVQAYLARRALDYLIGFNISPLLW+KLPGCRS GRVQSAALALICDRE EI
Subjt:  EAIAWHIIEMLQHEDALHEGISIARVVFHEITEASIKSALQSPRVIDANLVQAYLARRALDYLIGFNISPLLWRKLPGCRSAGRVQSAALALICDREMEI

Query:  DEFHAQEYWTIDIKLNQKDTCSSVEDFAVPAHLTHFDSKKLNQFAISSNMEAKNIESVLKSVNFQVLSSKKNKVRRNPPMPYITSTLQQDAASKFNFSTT
        D+F AQEYWTID+KLNQKD CSSVEDFAVPAHLTHFDSKKLNQF ISSNMEAKNIE+ LKSVNFQVLSS+KN V+ NPPMPYITSTLQQDAA KFNF  T
Subjt:  DEFHAQEYWTIDIKLNQKDTCSSVEDFAVPAHLTHFDSKKLNQFAISSNMEAKNIESVLKSVNFQVLSSKKNKVRRNPPMPYITSTLQQDAASKFNFSTT

Query:  YTMQVAQKLYEGIQLADGKAAGLITYLRTDGLHISDEAVKDIRSLIMQRYGKDFVPESGPKYFKKVKNAQEAHEAIRPTDVQRLPSMLVGILDEDSHKLY
        YTM++AQKLYEGIQLADGKAAGLITY RTDGLHISDEAVKDI SLIMQR+G+DFV +SG KYFKKVKNAQEA EAIRPTDVQRLPSMLVG LDEDSHKLY
Subjt:  YTMQVAQKLYEGIQLADGKAAGLITYLRTDGLHISDEAVKDIRSLIMQRYGKDFVPESGPKYFKKVKNAQEAHEAIRPTDVQRLPSMLVGILDEDSHKLY

Query:  SLIWLRTVACQMESSITEQVRMHVPL
        SLIWLRT+ACQME SITE++++   L
Subjt:  SLIWLRTVACQMESSITEQVRMHVPL

XP_011652536.2 uncharacterized protein LOC101210581 isoform X1 [Cucumis sativus]

0.0

84.01

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Query:  MSQLQRSLLFASSSTNAISSSVFSTAPSASSCSRLRPFTTKLQGSNLQNYTSKCIPVLPFPTACSSARCSQLVFRKGGVTFAVKT--VRAKAGPSVFTLY
        MSQLQRS+L ASSS+NAISSSVFSTAPSASS SRLRPF  KLQGS LQNYTSKCIPVLPF T C+SARCSQL FRKGGVTFA+K    RA+ GPSVFTLY
Subjt:  MSQLQRSLLFASSSTNAISSSVFSTAPSASSCSRLRPFTTKLQGSNLQNYTSKCIPVLPFPTACSSARCSQLVFRKGGVTFAVKT--VRAKAGPSVFTLY

Query:  SRLPLRFPHSAASPNASNQQLLNGTFTHKPPNYRAFGRKFFSNTTEA--------------------------------------------NSSNQLVGA
        SRLPLRFPHSAASP  SNQQLLN   THK P+YR  GRKFFSNTTEA                                            NSSNQLVGA
Subjt:  SRLPLRFPHSAASPNASNQQLLNGTFTHKPPNYRAFGRKFFSNTTEA--------------------------------------------NSSNQLVGA

Query:  TKEANLVSSSSSSSIRKTSKGLNEKKSSSKKKKEAISSAN-GNVEAVCKDGQSMSFDSSSTDLDVVQDPKKNVTESSSKDSASTQQQPNKKKRNSSRKKE
        TKEANLVSSSSSSSIRK SKGLNEKKS SKKKKEAISS N  +VEAV KDGQ+ SFD S+ D DVVQDPKKNVT  SSKDSASTQQQ NKKKRNSSRKKE
Subjt:  TKEANLVSSSSSSSIRKTSKGLNEKKSSSKKKKEAISSAN-GNVEAVCKDGQSMSFDSSSTDLDVVQDPKKNVTESSSKDSASTQQQPNKKKRNSSRKKE

Query:  VSKDTNKLPQEANVVFDAKWTSQGRTSFKQLYPPMGKSVMVVESVTKAKVIQNYLGDMFVVLPSHGHVRDLAAKSGSVRPDDDFSMVWEVPSAAYTHLKN
        V KD NKLPQEA+VVFDA+WTSQGRT+FKQLYPPMGKSVMVVESVTKAKVIQNYLGDMFVVLPSHGHVRDLAAKSGSVRPDDDFSMVWEVPSAA THLK+
Subjt:  VSKDTNKLPQEANVVFDAKWTSQGRTSFKQLYPPMGKSVMVVESVTKAKVIQNYLGDMFVVLPSHGHVRDLAAKSGSVRPDDDFSMVWEVPSAAYTHLKN

Query:  MKVSLNGAENLILASDPDREGEAIAWHIIEMLQHEDALHEGISIARVVFHEITEASIKSALQSPRVIDANLVQAYLARRALDYLIGFNISPLLWRKLPGC
        M+VSLNGAENLILASDPDREGEAIAWHIIEML H+DALHEGISIARVVFHEITEASIKSALQSPRVIDANLVQAYLARRALDYLIGFNISPLLWRKLPGC
Subjt:  MKVSLNGAENLILASDPDREGEAIAWHIIEMLQHEDALHEGISIARVVFHEITEASIKSALQSPRVIDANLVQAYLARRALDYLIGFNISPLLWRKLPGC

Query:  RSAGRVQSAALALICDREMEIDEFHAQEYWTIDIKLNQKDTCSSVEDFAVPAHLTHFDSKKLNQFAISSNMEAKNIESVLKSVNFQVLSSKKNKVRRNPP
        RSAGRVQSAALALICDREMEIDEFHAQEYW+IDI+LNQK++CS VEDFAVPAHLTHFDS+KLNQFAISSN EAKNIE+ LKSVNFQVLSSKK KVRRNPP
Subjt:  RSAGRVQSAALALICDREMEIDEFHAQEYWTIDIKLNQKDTCSSVEDFAVPAHLTHFDSKKLNQFAISSNMEAKNIESVLKSVNFQVLSSKKNKVRRNPP

Query:  MPYITSTLQQDAASKFNFSTTYTMQVAQKLYEGIQLADGKAAGLITYLRTDGLHISDEAVKDIRSLIMQRYGKDFVPESGPKYFKKVKNAQEAHEAIRPT
        MPYITSTLQQDAA+KFNFS +YTMQ+AQKLYEGIQLADGKAAGLITYLRTDGLHISDEAVKDIR+LIMQRYG++FVPESGPKYFKKVKNAQEAHEAIRPT
Subjt:  MPYITSTLQQDAASKFNFSTTYTMQVAQKLYEGIQLADGKAAGLITYLRTDGLHISDEAVKDIRSLIMQRYGKDFVPESGPKYFKKVKNAQEAHEAIRPT

Query:  DVQRLPSMLVGILDEDSHKLYSLIWLRTVACQMESSITEQVRMH
        DVQRLPSMLVG LDEDSHKLYSLIWLRTVACQMESSITEQ+++ 
Subjt:  DVQRLPSMLVGILDEDSHKLYSLIWLRTVACQMESSITEQVRMH

XP_016903545.1 PREDICTED: DNA topoisomerase 1 isoform X1 [Cucumis melo]

0.0

72.76

Show/hide

Query:  MSQLQRSLLFASSSTNAISSSVFSTAPSASSCSRLRPFTTKLQGSNLQNYTSKCIPVLPFPTACSSARCSQLVFRKGGVTFAVKTVRAKAG-------PS
        MSQLQRSL  ASSS+NAISSSVFSTA SA S SRLR F+TKLQGS LQNYTSKCIPVLPFPTACSSARCSQL+FRKGGVTFAVKT RAKAG       PS
Subjt:  MSQLQRSLLFASSSTNAISSSVFSTAPSASSCSRLRPFTTKLQGSNLQNYTSKCIPVLPFPTACSSARCSQLVFRKGGVTFAVKTVRAKAG-------PS

Query:  VFTLYSRLPLRFPHSAASPNASNQQLLNGTFTHKPPNYRAFGRKFFSNTTEA------------------------------------------------
        VFTLYSRLPLRFPHSAASPNASNQQLLN TFTHK PNYRAFGRKFFSNTTEA                                                
Subjt:  VFTLYSRLPLRFPHSAASPNASNQQLLNGTFTHKPPNYRAFGRKFFSNTTEA------------------------------------------------

Query:  -------NSSNQLVGATKEANLVSSSSSSSIRKTSKGLNEKKSSSKKKKEAISSAN--------------------------------------------
               NSS+QLVGATKEANLVSS+SSSSIR+ SKGLNEKKS SKKKK+AISS N                                            
Subjt:  -------NSSNQLVGATKEANLVSSSSSSSIRKTSKGLNEKKSSSKKKKEAISSAN--------------------------------------------

Query:  --------------------GNVEAVCKDGQSMSFDSSSTDLDVVQDPKKNVTESSSKDSASTQQQPNKKKRNSSRKKEVSKDTNKLPQEANVVFDAKWT
                             +VEAVCKDGQS SF SS+TD DVVQDPKKNVT+ +SKDS ST+QQ NKKK NSSR KE +K  NKL Q+ NV+ D + T
Subjt:  --------------------GNVEAVCKDGQSMSFDSSSTDLDVVQDPKKNVTESSSKDSASTQQQPNKKKRNSSRKKEVSKDTNKLPQEANVVFDAKWT

Query:  SQGRTSFKQLYPPMGKSVMVVESVTKAKVIQNYLGDMFVVLPSHGHVRDLAAKSGSVRPDDDFSMVWEVPSAAYTHLKNMKVSLNGAENLILASDPDREG
        SQG+T+FKQLYPPMGKSV+VVESVTKAKVIQ+YLGDMFVVLPSHGHVRDLAA+SGSVRP+DDF MVWEVPSAA+THLK++++SLNGAENLILASDPD+EG
Subjt:  SQGRTSFKQLYPPMGKSVMVVESVTKAKVIQNYLGDMFVVLPSHGHVRDLAAKSGSVRPDDDFSMVWEVPSAAYTHLKNMKVSLNGAENLILASDPDREG

Query:  EAIAWHIIEMLQHEDALHEGISIARVVFHEITEASIKSALQSPRVIDANLVQAYLARRALDYLIGFNISPLLWRKLPGCRSAGRVQSAALALICDREMEI
        EAIAWHIIEMLQH+ ALHEGISIARVVFHEITEASIKSALQSPRVID NLVQAYLARRALDYLIGFNISPLLW+KLPGCRS GRVQSAALALICDRE EI
Subjt:  EAIAWHIIEMLQHEDALHEGISIARVVFHEITEASIKSALQSPRVIDANLVQAYLARRALDYLIGFNISPLLWRKLPGCRSAGRVQSAALALICDREMEI

Query:  DEFHAQEYWTIDIKLNQKDTCSSVEDFAVPAHLTHFDSKKLNQFAISSNMEAKNIESVLKSVNFQVLSSKKNKVRRNPPMPYITSTLQQDAASKFNFSTT
        D+F AQEYWTID+KLNQKD CSSVEDFAVPAHLTHFDSKKLNQF ISSNMEAKNIE+ LKSVNFQVLSS+KN V+ NPPMPYITSTLQQDAA KFNF  T
Subjt:  DEFHAQEYWTIDIKLNQKDTCSSVEDFAVPAHLTHFDSKKLNQFAISSNMEAKNIESVLKSVNFQVLSSKKNKVRRNPPMPYITSTLQQDAASKFNFSTT

Query:  YTMQVAQKLYEGIQLADGKAAGLITYLRTDGLHISDEAVKDIRSLIMQRYGKDFVPESGPKYFKKVKNAQEAHEAIRPTDVQRLPSMLVGILDEDSHKLY
        YTM++AQKLYEGIQLADGKAAGLITY RTDGLHISDEAVKDI SLIMQR+G+DFV +SG KYFKKVKNAQEA EAIRPTDVQRLPSMLVG LDEDSHKLY
Subjt:  YTMQVAQKLYEGIQLADGKAAGLITYLRTDGLHISDEAVKDIRSLIMQRYGKDFVPESGPKYFKKVKNAQEAHEAIRPTDVQRLPSMLVGILDEDSHKLY

Query:  SLIWLRTVACQMESSITEQVRMHVPL
        SLIWLRT+ACQME SITE++++   L
Subjt:  SLIWLRTVACQMESSITEQVRMHVPL

XP_016903546.1 PREDICTED: DNA topoisomerase 1 isoform X2 [Cucumis melo]

0.0

72.76

Show/hide

Query:  MSQLQRSLLFASSSTNAISSSVFSTAPSASSCSRLRPFTTKLQGSNLQNYTSKCIPVLPFPTACSSARCSQLVFRKGGVTFAVKTVRAKAG-------PS
        MSQLQRSL  ASSS+NAISSSVFSTA SA S SRLR F+TKLQGS LQNYTSKCIPVLPFPTACSSARCSQL+FRKGGVTFAVKT RAKAG       PS
Subjt:  MSQLQRSLLFASSSTNAISSSVFSTAPSASSCSRLRPFTTKLQGSNLQNYTSKCIPVLPFPTACSSARCSQLVFRKGGVTFAVKTVRAKAG-------PS

Query:  VFTLYSRLPLRFPHSAASPNASNQQLLNGTFTHKPPNYRAFGRKFFSNTTEA------------------------------------------------
        VFTLYSRLPLRFPHSAASPNASNQQLLN TFTHK PNYRAFGRKFFSNTTEA                                                
Subjt:  VFTLYSRLPLRFPHSAASPNASNQQLLNGTFTHKPPNYRAFGRKFFSNTTEA------------------------------------------------

Query:  -------NSSNQLVGATKEANLVSSSSSSSIRKTSKGLNEKKSSSKKKKEAISSAN--------------------------------------------
               NSS+QLVGATKEANLVSS+SSSSIR+ SKGLNEKKS SKKKK+AISS N                                            
Subjt:  -------NSSNQLVGATKEANLVSSSSSSSIRKTSKGLNEKKSSSKKKKEAISSAN--------------------------------------------

Query:  --------------------GNVEAVCKDGQSMSFDSSSTDLDVVQDPKKNVTESSSKDSASTQQQPNKKKRNSSRKKEVSKDTNKLPQEANVVFDAKWT
                             +VEAVCKDGQS SF SS+TD DVVQDPKKNVT+ +SKDS ST+QQ NKKK NSSR KE +K  NKL Q+ NV+ D + T
Subjt:  --------------------GNVEAVCKDGQSMSFDSSSTDLDVVQDPKKNVTESSSKDSASTQQQPNKKKRNSSRKKEVSKDTNKLPQEANVVFDAKWT

Query:  SQGRTSFKQLYPPMGKSVMVVESVTKAKVIQNYLGDMFVVLPSHGHVRDLAAKSGSVRPDDDFSMVWEVPSAAYTHLKNMKVSLNGAENLILASDPDREG
        SQG+T+FKQLYPPMGKSV+VVESVTKAKVIQ+YLGDMFVVLPSHGHVRDLAA+SGSVRP+DDF MVWEVPSAA+THLK++++SLNGAENLILASDPD+EG
Subjt:  SQGRTSFKQLYPPMGKSVMVVESVTKAKVIQNYLGDMFVVLPSHGHVRDLAAKSGSVRPDDDFSMVWEVPSAAYTHLKNMKVSLNGAENLILASDPDREG

Query:  EAIAWHIIEMLQHEDALHEGISIARVVFHEITEASIKSALQSPRVIDANLVQAYLARRALDYLIGFNISPLLWRKLPGCRSAGRVQSAALALICDREMEI
        EAIAWHIIEMLQH+ ALHEGISIARVVFHEITEASIKSALQSPRVID NLVQAYLARRALDYLIGFNISPLLW+KLPGCRS GRVQSAALALICDRE EI
Subjt:  EAIAWHIIEMLQHEDALHEGISIARVVFHEITEASIKSALQSPRVIDANLVQAYLARRALDYLIGFNISPLLWRKLPGCRSAGRVQSAALALICDREMEI

Query:  DEFHAQEYWTIDIKLNQKDTCSSVEDFAVPAHLTHFDSKKLNQFAISSNMEAKNIESVLKSVNFQVLSSKKNKVRRNPPMPYITSTLQQDAASKFNFSTT
        D+F AQEYWTID+KLNQKD CSSVEDFAVPAHLTHFDSKKLNQF ISSNMEAKNIE+ LKSVNFQVLSS+KN V+ NPPMPYITSTLQQDAA KFNF  T
Subjt:  DEFHAQEYWTIDIKLNQKDTCSSVEDFAVPAHLTHFDSKKLNQFAISSNMEAKNIESVLKSVNFQVLSSKKNKVRRNPPMPYITSTLQQDAASKFNFSTT

Query:  YTMQVAQKLYEGIQLADGKAAGLITYLRTDGLHISDEAVKDIRSLIMQRYGKDFVPESGPKYFKKVKNAQEAHEAIRPTDVQRLPSMLVGILDEDSHKLY
        YTM++AQKLYEGIQLADGKAAGLITY RTDGLHISDEAVKDI SLIMQR+G+DFV +SG KYFKKVKNAQEA EAIRPTDVQRLPSMLVG LDEDSHKLY
Subjt:  YTMQVAQKLYEGIQLADGKAAGLITYLRTDGLHISDEAVKDIRSLIMQRYGKDFVPESGPKYFKKVKNAQEAHEAIRPTDVQRLPSMLVGILDEDSHKLY

Query:  SLIWLRTVACQMESSITEQVRMHVPL
        SLIWLRT+ACQME SITE++++   L
Subjt:  SLIWLRTVACQMESSITEQVRMHVPL

TrEMBL top hits

e value

%identity

Alignment

A0A1S4E5M8 Omega-protein

0.0e+00

72.99

Show/hide

Query:  MSQLQRSLLFASSSTNAISSSVFSTAPSASSCSRLRPFTTKLQGSNLQNYTSKCIPVLPFPTACSSARCSQLVFRKGGVTFAVKTVRAKA-------GPS
        MSQLQRSL  ASSS+NAISSSVFSTA SA S SRLR F+TKLQGS LQNYTSKCIPVLPFPTACSSARCSQL+FRKGGVTFAVKT RAKA       GPS
Subjt:  MSQLQRSLLFASSSTNAISSSVFSTAPSASSCSRLRPFTTKLQGSNLQNYTSKCIPVLPFPTACSSARCSQLVFRKGGVTFAVKTVRAKA-------GPS

Query:  VFTLYSRLPLRFPHSAASPNASNQQLLNGTFTHKPPNYRAFGRKFFSNTTEA------------------------------------------------
        VFTLYSRLPLRFPHSAASPNASNQQLLN TFTHK PNYRAFGRKFFSNTTEA                                                
Subjt:  VFTLYSRLPLRFPHSAASPNASNQQLLNGTFTHKPPNYRAFGRKFFSNTTEA------------------------------------------------

Query:  -------NSSNQLVGATKEANLVSSSSSSSIRKTSKGLNEKKSSSKKKKEAISSAN--------------------------------------------
               NSS+QLVGATKEANLVSS+SSSSIR+ SKGLNEKKS SKKKK+AISS N                                            
Subjt:  -------NSSNQLVGATKEANLVSSSSSSSIRKTSKGLNEKKSSSKKKKEAISSAN--------------------------------------------

Query:  --------------------GNVEAVCKDGQSMSFDSSSTDLDVVQDPKKNVTESSSKDSASTQQQPNKKKRNSSRKKEVSKDTNKLPQEANVVFDAKWT
                             +VEAVCKDGQS SF SS+TD DVVQDPKKNVT+ +SKDS ST+QQ NKKK NSSR KE +K  NKL Q+ NV+ D + T
Subjt:  --------------------GNVEAVCKDGQSMSFDSSSTDLDVVQDPKKNVTESSSKDSASTQQQPNKKKRNSSRKKEVSKDTNKLPQEANVVFDAKWT

Query:  SQGRTSFKQLYPPMGKSVMVVESVTKAKVIQNYLGDMFVVLPSHGHVRDLAAKSGSVRPDDDFSMVWEVPSAAYTHLKNMKVSLNGAENLILASDPDREG
        SQG+T+FKQLYPPMGKSV+VVESVTKAKVIQ+YLGDMFVVLPSHGHVRDLAA+SGSVRP+DDF MVWEVPSAA+THLK++++SLNGAENLILASDPD+EG
Subjt:  SQGRTSFKQLYPPMGKSVMVVESVTKAKVIQNYLGDMFVVLPSHGHVRDLAAKSGSVRPDDDFSMVWEVPSAAYTHLKNMKVSLNGAENLILASDPDREG

Query:  EAIAWHIIEMLQHEDALHEGISIARVVFHEITEASIKSALQSPRVIDANLVQAYLARRALDYLIGFNISPLLWRKLPGCRSAGRVQSAALALICDREMEI
        EAIAWHIIEMLQH+ ALHEGISIARVVFHEITEASIKSALQSPRVID NLVQAYLARRALDYLIGFNISPLLW+KLPGCRS GRVQSAALALICDRE EI
Subjt:  EAIAWHIIEMLQHEDALHEGISIARVVFHEITEASIKSALQSPRVIDANLVQAYLARRALDYLIGFNISPLLWRKLPGCRSAGRVQSAALALICDREMEI

Query:  DEFHAQEYWTIDIKLNQKDTCSSVEDFAVPAHLTHFDSKKLNQFAISSNMEAKNIESVLKSVNFQVLSSKKNKVRRNPPMPYITSTLQQDAASKFNFSTT
        D+F AQEYWTID+KLNQKD CSSVEDFAVPAHLTHFDSKKLNQF ISSNMEAKNIE+ LKSVNFQVLSS+KN V+ NPPMPYITSTLQQDAA KFNF  T
Subjt:  DEFHAQEYWTIDIKLNQKDTCSSVEDFAVPAHLTHFDSKKLNQFAISSNMEAKNIESVLKSVNFQVLSSKKNKVRRNPPMPYITSTLQQDAASKFNFSTT

Query:  YTMQVAQKLYEGIQLADGKAAGLITYLRTDGLHISDEAVKDIRSLIMQRYGKDFVPESGPKYFKKVKNAQEAHEAIRPTDVQRLPSMLVGILDEDSHKLY
        YTM++AQKLYEGIQLADGKAAGLITY RTDGLHISDEAVKDI SLIMQR+G+DFV +SG KYFKKVKNAQEA EAIRPTDVQRLPSMLVG LDEDSHKLY
Subjt:  YTMQVAQKLYEGIQLADGKAAGLITYLRTDGLHISDEAVKDIRSLIMQRYGKDFVPESGPKYFKKVKNAQEAHEAIRPTDVQRLPSMLVGILDEDSHKLY

Query:  SLIWLRTVACQMESSITEQVRM
        SLIWLRT+ACQME SITE++++
Subjt:  SLIWLRTVACQMESSITEQVRM

A0A1S4E6F1 DNA topoisomerase

0.0e+00

72.99

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Query:  MSQLQRSLLFASSSTNAISSSVFSTAPSASSCSRLRPFTTKLQGSNLQNYTSKCIPVLPFPTACSSARCSQLVFRKGGVTFAVKTVRAKA-------GPS
        MSQLQRSL  ASSS+NAISSSVFSTA SA S SRLR F+TKLQGS LQNYTSKCIPVLPFPTACSSARCSQL+FRKGGVTFAVKT RAKA       GPS
Subjt:  MSQLQRSLLFASSSTNAISSSVFSTAPSASSCSRLRPFTTKLQGSNLQNYTSKCIPVLPFPTACSSARCSQLVFRKGGVTFAVKTVRAKA-------GPS

Query:  VFTLYSRLPLRFPHSAASPNASNQQLLNGTFTHKPPNYRAFGRKFFSNTTEA------------------------------------------------
        VFTLYSRLPLRFPHSAASPNASNQQLLN TFTHK PNYRAFGRKFFSNTTEA                                                
Subjt:  VFTLYSRLPLRFPHSAASPNASNQQLLNGTFTHKPPNYRAFGRKFFSNTTEA------------------------------------------------

Query:  -------NSSNQLVGATKEANLVSSSSSSSIRKTSKGLNEKKSSSKKKKEAISSAN--------------------------------------------
               NSS+QLVGATKEANLVSS+SSSSIR+ SKGLNEKKS SKKKK+AISS N                                            
Subjt:  -------NSSNQLVGATKEANLVSSSSSSSIRKTSKGLNEKKSSSKKKKEAISSAN--------------------------------------------

Query:  --------------------GNVEAVCKDGQSMSFDSSSTDLDVVQDPKKNVTESSSKDSASTQQQPNKKKRNSSRKKEVSKDTNKLPQEANVVFDAKWT
                             +VEAVCKDGQS SF SS+TD DVVQDPKKNVT+ +SKDS ST+QQ NKKK NSSR KE +K  NKL Q+ NV+ D + T
Subjt:  --------------------GNVEAVCKDGQSMSFDSSSTDLDVVQDPKKNVTESSSKDSASTQQQPNKKKRNSSRKKEVSKDTNKLPQEANVVFDAKWT

Query:  SQGRTSFKQLYPPMGKSVMVVESVTKAKVIQNYLGDMFVVLPSHGHVRDLAAKSGSVRPDDDFSMVWEVPSAAYTHLKNMKVSLNGAENLILASDPDREG
        SQG+T+FKQLYPPMGKSV+VVESVTKAKVIQ+YLGDMFVVLPSHGHVRDLAA+SGSVRP+DDF MVWEVPSAA+THLK++++SLNGAENLILASDPD+EG
Subjt:  SQGRTSFKQLYPPMGKSVMVVESVTKAKVIQNYLGDMFVVLPSHGHVRDLAAKSGSVRPDDDFSMVWEVPSAAYTHLKNMKVSLNGAENLILASDPDREG

Query:  EAIAWHIIEMLQHEDALHEGISIARVVFHEITEASIKSALQSPRVIDANLVQAYLARRALDYLIGFNISPLLWRKLPGCRSAGRVQSAALALICDREMEI
        EAIAWHIIEMLQH+ ALHEGISIARVVFHEITEASIKSALQSPRVID NLVQAYLARRALDYLIGFNISPLLW+KLPGCRS GRVQSAALALICDRE EI
Subjt:  EAIAWHIIEMLQHEDALHEGISIARVVFHEITEASIKSALQSPRVIDANLVQAYLARRALDYLIGFNISPLLWRKLPGCRSAGRVQSAALALICDREMEI

Query:  DEFHAQEYWTIDIKLNQKDTCSSVEDFAVPAHLTHFDSKKLNQFAISSNMEAKNIESVLKSVNFQVLSSKKNKVRRNPPMPYITSTLQQDAASKFNFSTT
        D+F AQEYWTID+KLNQKD CSSVEDFAVPAHLTHFDSKKLNQF ISSNMEAKNIE+ LKSVNFQVLSS+KN V+ NPPMPYITSTLQQDAA KFNF  T
Subjt:  DEFHAQEYWTIDIKLNQKDTCSSVEDFAVPAHLTHFDSKKLNQFAISSNMEAKNIESVLKSVNFQVLSSKKNKVRRNPPMPYITSTLQQDAASKFNFSTT

Query:  YTMQVAQKLYEGIQLADGKAAGLITYLRTDGLHISDEAVKDIRSLIMQRYGKDFVPESGPKYFKKVKNAQEAHEAIRPTDVQRLPSMLVGILDEDSHKLY
        YTM++AQKLYEGIQLADGKAAGLITY RTDGLHISDEAVKDI SLIMQR+G+DFV +SG KYFKKVKNAQEA EAIRPTDVQRLPSMLVG LDEDSHKLY
Subjt:  YTMQVAQKLYEGIQLADGKAAGLITYLRTDGLHISDEAVKDIRSLIMQRYGKDFVPESGPKYFKKVKNAQEAHEAIRPTDVQRLPSMLVGILDEDSHKLY

Query:  SLIWLRTVACQMESSITEQVRM
        SLIWLRT+ACQME SITE++++
Subjt:  SLIWLRTVACQMESSITEQVRM

A0A5A7T7A4 DNA topoisomerase

0.0e+00

72.99

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Query:  MSQLQRSLLFASSSTNAISSSVFSTAPSASSCSRLRPFTTKLQGSNLQNYTSKCIPVLPFPTACSSARCSQLVFRKGGVTFAVKTVRAKA-------GPS
        MSQLQRSL  ASSS+NAISSSVFSTA SA S SRLR F+TKLQGS LQNYTSKCIPVLPFPTACSSARCSQL+FRKGGVTFAVKT RAKA       GPS
Subjt:  MSQLQRSLLFASSSTNAISSSVFSTAPSASSCSRLRPFTTKLQGSNLQNYTSKCIPVLPFPTACSSARCSQLVFRKGGVTFAVKTVRAKA-------GPS

Query:  VFTLYSRLPLRFPHSAASPNASNQQLLNGTFTHKPPNYRAFGRKFFSNTTEA------------------------------------------------
        VFTLYSRLPLRFPHSAASPNASNQQLLN TFTHK PNYRAFGRKFFSNTTEA                                                
Subjt:  VFTLYSRLPLRFPHSAASPNASNQQLLNGTFTHKPPNYRAFGRKFFSNTTEA------------------------------------------------

Query:  -------NSSNQLVGATKEANLVSSSSSSSIRKTSKGLNEKKSSSKKKKEAISSAN--------------------------------------------
               NSS+QLVGATKEANLVSS+SSSSIR+ SKGLNEKKS SKKKK+AISS N                                            
Subjt:  -------NSSNQLVGATKEANLVSSSSSSSIRKTSKGLNEKKSSSKKKKEAISSAN--------------------------------------------

Query:  --------------------GNVEAVCKDGQSMSFDSSSTDLDVVQDPKKNVTESSSKDSASTQQQPNKKKRNSSRKKEVSKDTNKLPQEANVVFDAKWT
                             +VEAVCKDGQS SF SS+TD DVVQDPKKNVT+ +SKDS ST+QQ NKKK NSSR KE +K  NKL Q+ NV+ D + T
Subjt:  --------------------GNVEAVCKDGQSMSFDSSSTDLDVVQDPKKNVTESSSKDSASTQQQPNKKKRNSSRKKEVSKDTNKLPQEANVVFDAKWT

Query:  SQGRTSFKQLYPPMGKSVMVVESVTKAKVIQNYLGDMFVVLPSHGHVRDLAAKSGSVRPDDDFSMVWEVPSAAYTHLKNMKVSLNGAENLILASDPDREG
        SQG+T+FKQLYPPMGKSV+VVESVTKAKVIQ+YLGDMFVVLPSHGHVRDLAA+SGSVRP+DDF MVWEVPSAA+THLK++++SLNGAENLILASDPD+EG
Subjt:  SQGRTSFKQLYPPMGKSVMVVESVTKAKVIQNYLGDMFVVLPSHGHVRDLAAKSGSVRPDDDFSMVWEVPSAAYTHLKNMKVSLNGAENLILASDPDREG

Query:  EAIAWHIIEMLQHEDALHEGISIARVVFHEITEASIKSALQSPRVIDANLVQAYLARRALDYLIGFNISPLLWRKLPGCRSAGRVQSAALALICDREMEI
        EAIAWHIIEMLQH+ ALHEGISIARVVFHEITEASIKSALQSPRVID NLVQAYLARRALDYLIGFNISPLLW+KLPGCRS GRVQSAALALICDRE EI
Subjt:  EAIAWHIIEMLQHEDALHEGISIARVVFHEITEASIKSALQSPRVIDANLVQAYLARRALDYLIGFNISPLLWRKLPGCRSAGRVQSAALALICDREMEI

Query:  DEFHAQEYWTIDIKLNQKDTCSSVEDFAVPAHLTHFDSKKLNQFAISSNMEAKNIESVLKSVNFQVLSSKKNKVRRNPPMPYITSTLQQDAASKFNFSTT
        D+F AQEYWTID+KLNQKD CSSVEDFAVPAHLTHFDSKKLNQF ISSNMEAKNIE+ LKSVNFQVLSS+KN V+ NPPMPYITSTLQQDAA KFNF  T
Subjt:  DEFHAQEYWTIDIKLNQKDTCSSVEDFAVPAHLTHFDSKKLNQFAISSNMEAKNIESVLKSVNFQVLSSKKNKVRRNPPMPYITSTLQQDAASKFNFSTT

Query:  YTMQVAQKLYEGIQLADGKAAGLITYLRTDGLHISDEAVKDIRSLIMQRYGKDFVPESGPKYFKKVKNAQEAHEAIRPTDVQRLPSMLVGILDEDSHKLY
        YTM++AQKLYEGIQLADGKAAGLITY RTDGLHISDEAVKDI SLIMQR+G+DFV +SG KYFKKVKNAQEA EAIRPTDVQRLPSMLVG LDEDSHKLY
Subjt:  YTMQVAQKLYEGIQLADGKAAGLITYLRTDGLHISDEAVKDIRSLIMQRYGKDFVPESGPKYFKKVKNAQEAHEAIRPTDVQRLPSMLVGILDEDSHKLY

Query:  SLIWLRTVACQMESSITEQVRM
        SLIWLRT+ACQME SITE++++
Subjt:  SLIWLRTVACQMESSITEQVRM

A0A5A7TAX8 Omega-protein

0.0e+00

99.57

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Query:  MSQLQRSLLFASSSTNAISSSVFSTAPSASSCSRLRPFTTKLQGSNLQNYTSKCIPVLPFPTACSSARCSQLVFRKGGVTFAVKTVRAKAGPSVFTLYSR
        MSQLQRSLLFASSSTNAISSSVFSTAPSASSCSRLRPFTTKLQGSNLQNYTSKCIPVLPFPTACSSARCSQLVFRKGGVTFAVKTVRAKAGPSVFTLYSR
Subjt:  MSQLQRSLLFASSSTNAISSSVFSTAPSASSCSRLRPFTTKLQGSNLQNYTSKCIPVLPFPTACSSARCSQLVFRKGGVTFAVKTVRAKAGPSVFTLYSR

Query:  LPLRFPHSAASPNASNQQLLNGTFTHKPPNYRAFGRKFFSNTTEANSSNQLVGATKEANLVSSSSSSSIRKTSKGLNEKKSSSKKKKEAISSANGNVEAV
        LPLRFPHSAASPNASNQQLLNGTFTHKPPNYRAFGRKFFSNTTEANSSNQLVGATKEANLVSSSSSSSIRKTSKGLNEKKSSSKKKKEAISSANGNVEAV
Subjt:  LPLRFPHSAASPNASNQQLLNGTFTHKPPNYRAFGRKFFSNTTEANSSNQLVGATKEANLVSSSSSSSIRKTSKGLNEKKSSSKKKKEAISSANGNVEAV

Query:  CKDGQSMSFDSSSTDLDVVQDPKKNVTESSSKDSASTQQQPNKKKRNSSRKKEVSKDTNKLPQEANVVFDAKWTSQGRTSFKQLYPPMGKSVMVVESVTK
        CKDGQSMSFDSSSTDLDVVQDPKKNVTESSSKDSASTQQQPNKKKRNSSRKKEVSKDTNKLPQEANVVFDAKWTSQGRTSFKQLYPPMGKSVMVVESVTK
Subjt:  CKDGQSMSFDSSSTDLDVVQDPKKNVTESSSKDSASTQQQPNKKKRNSSRKKEVSKDTNKLPQEANVVFDAKWTSQGRTSFKQLYPPMGKSVMVVESVTK

Query:  AKVIQNYLGDMFVVLPSHGHVRDLAAKSGSVRPDDDFSMVWEVPSAAYTHLKNMKVSLNGAENLILASDPDREGEAIAWHIIEMLQHEDALHEGISIARV
        AKVIQNYLGDMFVVLPSHGHVRDLAAKSGSVRPDDDFSMVWEVPSAAYTHLKNMKVSLNGAENLILASDPDREGEAIAWHIIEMLQHEDALHEGISIARV
Subjt:  AKVIQNYLGDMFVVLPSHGHVRDLAAKSGSVRPDDDFSMVWEVPSAAYTHLKNMKVSLNGAENLILASDPDREGEAIAWHIIEMLQHEDALHEGISIARV

Query:  VFHEITEASIKSALQSPRVIDANLVQAYLARRALDYLIGFNISPLLWRKLPGCRSAGRVQSAALALICDREMEIDEFHAQEYWTIDIKLNQKDTCSSVED
        VFHEITEASIKSALQSPRVIDANLVQAYLARRALDYLIGFNISPLLWRKLPGCRSAGRVQSAALALICDREMEIDEFHAQEYWTIDIKLNQKDTCSSVED
Subjt:  VFHEITEASIKSALQSPRVIDANLVQAYLARRALDYLIGFNISPLLWRKLPGCRSAGRVQSAALALICDREMEIDEFHAQEYWTIDIKLNQKDTCSSVED

Query:  FAVPAHLTHFDSKKLNQFAISSNMEAKNIESVLKSVNFQVLSSKKNKVRRNPPMPYITSTLQQDAASKFNFSTTYTMQVAQKLYEGIQLADGKAAGLITY
        FAVPAHLTHFDSKKLNQFAISSNMEAKNIESVLKSVNFQVLSSKKNKVRRNPPMPYITSTLQQDAASKFNFSTTYTMQVAQKLYEGIQLADGKAAGLITY
Subjt:  FAVPAHLTHFDSKKLNQFAISSNMEAKNIESVLKSVNFQVLSSKKNKVRRNPPMPYITSTLQQDAASKFNFSTTYTMQVAQKLYEGIQLADGKAAGLITY

Query:  LRTDGLHISDEAVKDIRSLIMQRYGKDFVPESGPKYFKKVKNAQEAHEAIRPTDVQRLPSMLVGILDEDSHKLYSLIWLRTVACQMESSITEQVRM
        LRTDGLHISDEAVKDIRSLIMQRYGKDFVPESGPKYFKKVKNAQEAHEAIRPTDVQRLPSMLVGILDEDSHKLYSLIWLRTVACQMESSITEQ+++
Subjt:  LRTDGLHISDEAVKDIRSLIMQRYGKDFVPESGPKYFKKVKNAQEAHEAIRPTDVQRLPSMLVGILDEDSHKLYSLIWLRTVACQMESSITEQVRM

A0A6J1IF86 Omega-protein

6.6e-296

74.77

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Query:  MSQLQRSLLFASSSTNAISSSVFSTAPSASSCSRLRPFTTKLQGSNLQNYTSKCIPVLPFPTACSSARCSQLVFRKGGVTFAVKTVRAKA-------GPS
        M QLQRSL  A++S+NA+SSSVFST PSA S SRLRP   KLQ    QN TSKCIPVLPF T C+ A+CSQLVFRK  VTFAVKT RAKA       GPS
Subjt:  MSQLQRSLLFASSSTNAISSSVFSTAPSASSCSRLRPFTTKLQGSNLQNYTSKCIPVLPFPTACSSARCSQLVFRKGGVTFAVKTVRAKA-------GPS

Query:  -VFTLYSRLPLRFPHSAASPNASNQQLLNGTFTHKPPNYRAFGRKFFSNTTEA-----------------------------------------------
         VFTL+SRLPL F HS ASPNAS +Q+LNGTFT   PNYRAF +KFFS +TEA                                               
Subjt:  -VFTLYSRLPLRFPHSAASPNASNQQLLNGTFTHKPPNYRAFGRKFFSNTTEA-----------------------------------------------

Query:  ---------NSSNQLVGATKEANLVSSSSSSSIRKTSKGLNEKKSSSKKKKEAISSAN-GNVEAVCKDGQSMSFDSSSTDLDVVQDPKKNVTESSSKDSA
                 NSS+QLVG TKEA LVSS+SSSS+RK SKGL EK S SKKKKEAIS  N  +VEAVCKD QS S DSS+ D +VVQ+PKK  +  ++K S 
Subjt:  ---------NSSNQLVGATKEANLVSSSSSSSIRKTSKGLNEKKSSSKKKKEAISSAN-GNVEAVCKDGQSMSFDSSSTDLDVVQDPKKNVTESSSKDSA

Query:  STQQQPNKKKRNSSRKKEVSKDTNKLPQEANVVFDAKWTSQGRTSFKQLYPPMGKSVMVVESVTKAKVIQNYLGDMFVVLPSHGHVRDLAAKSGSVRPDD
        ST QQ NKKK NSSRKKE  KD +KLPQ+ N+V DA+  SQG T+ KQLYPPMGKSVMVVESVTKAKVIQNYLGDMF VLPSHGHVRDLAA+SGSVRPDD
Subjt:  STQQQPNKKKRNSSRKKEVSKDTNKLPQEANVVFDAKWTSQGRTSFKQLYPPMGKSVMVVESVTKAKVIQNYLGDMFVVLPSHGHVRDLAAKSGSVRPDD

Query:  DFSMVWEVPSAAYTHLKNMKVSLNGAENLILASDPDREGEAIAWHIIEMLQHEDALHEGISIARVVFHEITEASIKSALQSPRVIDANLVQAYLARRALD
        DFSMVWEVPSAA+THLK+MKVSLNGAENLILASDPDREGEAIAWHIIEMLQ +DALHEGISIARVVFHEITEASIKSALQSPR IDANLVQAYLARRALD
Subjt:  DFSMVWEVPSAAYTHLKNMKVSLNGAENLILASDPDREGEAIAWHIIEMLQHEDALHEGISIARVVFHEITEASIKSALQSPRVIDANLVQAYLARRALD

Query:  YLIGFNISPLLWRKLPGCRSAGRVQSAALALICDREMEIDEFHAQEYWTIDIKLNQKDTCSSVEDFAVPAHLTHFDSKKLNQFAISSNMEAKNIESVLKS
        YLIGFNISPLLWRKLPGC+SAGRVQSAALALICDRE+EI+EF  QEYWTIDI+LNQKD CSSVE+F VPAHLTHFDSKKLNQFAISS  EAKNIE+ LKS
Subjt:  YLIGFNISPLLWRKLPGCRSAGRVQSAALALICDREMEIDEFHAQEYWTIDIKLNQKDTCSSVEDFAVPAHLTHFDSKKLNQFAISSNMEAKNIESVLKS

Query:  VNFQVLSSKKNKVRRNPPMPYITSTLQQDAASKFNFSTTYTMQVAQKLYEGIQLADGKAAGLITYLRTDGLHISDEAVKDIRSLIMQRYGKDFVPESGPK
        VNFQVLSSKKNKVRRNPPMPYITSTLQQDAA+K NF  +YTM++AQKLYEGIQLADGKAAGLITY RTDGLHISDEAVKDIRSLI QRYG +FV ES  K
Subjt:  VNFQVLSSKKNKVRRNPPMPYITSTLQQDAASKFNFSTTYTMQVAQKLYEGIQLADGKAAGLITYLRTDGLHISDEAVKDIRSLIMQRYGKDFVPESGPK

Query:  YFKKVKNAQEAHEAIRPTDVQRLPSMLVGILDEDSHKLYSLIWLRTVACQMESSITEQVRM
        YFKKVKNAQEAHEAIRPTDVQRLPSMLVG LDEDSHKLYSLIWLRT+ACQME SITEQ+++
Subjt:  YFKKVKNAQEAHEAIRPTDVQRLPSMLVGILDEDSHKLYSLIWLRTVACQMESSITEQVRM

SwissProt top hits

e value

%identity

Alignment

Q1RIM1 DNA topoisomerase 1

1.0e-107

50.37

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Query:  VMVVESVTKAKVIQNYLGDMFVVLPSHGHVRDLAAKSGSVRPDDDFSMVWEVPSAAYTHLKNMKVSLNGAENLILASDPDREGEAIAWHIIEMLQHEDAL
        +++VES  KAK I  YLGD F V+ S GH+RDL +K GSV PD++FSM +++   A  ++  +      AE++ LA+DPDREGE+I+WHI E+++ ++ +
Subjt:  VMVVESVTKAKVIQNYLGDMFVVLPSHGHVRDLAAKSGSVRPDDDFSMVWEVPSAAYTHLKNMKVSLNGAENLILASDPDREGEAIAWHIIEMLQHEDAL

Query:  HEGISIARVVFHEITEASIKSALQSPRVIDANLVQAYLARRALDYLIGFNISPLLWRKLPGCRSAGRVQSAALALICDREMEIDEFHAQEYWTIDIKLNQ
               RV F+EIT+ +I  A+++PR +D NLV A  ARRALDYL+GF +SPLLWRKLPGC+SAGRVQS AL LIC+RE EI+ F ++EYW I +K+  
Subjt:  HEGISIARVVFHEITEASIKSALQSPRVIDANLVQAYLARRALDYLIGFNISPLLWRKLPGCRSAGRVQSAALALICDREMEIDEFHAQEYWTIDIKLNQ

Query:  KDTCSSVEDFAVPAHLTHFDSKKLNQFAISSNMEAKNIESVLKSVNFQVLSSKKNKVRRNPPMPYITSTLQQDAASKFNFSTTYTMQVAQKLYEGIQLAD
            S+ E F   A LTH + +KL +F+I+++ EAK++   LKS NF V   +K + +R P  P+ITS+LQQ+AA K  FS   TMQ+AQKLYEG+ +  
Subjt:  KDTCSSVEDFAVPAHLTHFDSKKLNQFAISSNMEAKNIESVLKSVNFQVLSSKKNKVRRNPPMPYITSTLQQDAASKFNFSTTYTMQVAQKLYEGIQLAD

Query:  GKAAGLITYLRTDGLHISDEAVKDIRSLIMQRYGKDFVPESGPKYFKKVKNAQEAHEAIRPTDVQRLPSMLVGILDEDSHKLYSLIWLRTVACQMESSIT
         +  GLITY+RTDG+ +S++AV +IR LI + YG  ++P S   Y  KVKNAQEAHEAIRPT++  +P+ L   L++D +KLY LIW RT+ACQME+ I 
Subjt:  GKAAGLITYLRTDGLHISDEAVKDIRSLIMQRYGKDFVPESGPKYFKKVKNAQEAHEAIRPTDVQRLPSMLVGILDEDSHKLYSLIWLRTVACQMESSIT

Query:  EQV
        + V
Subjt:  EQV

Q4UM42 DNA topoisomerase 1

5.0e-107

49.88

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Query:  VMVVESVTKAKVIQNYLGDMFVVLPSHGHVRDLAAKSGSVRPDDDFSMVWEVPSAAYTHLKNMKVSLNGAENLILASDPDREGEAIAWHIIEMLQHEDAL
        +++VES  KAK I  YLGD F V+ S GH+RDL +K GSV PD++F+M +++   A  ++  +      A+ + LA+DPDREGEAI+WH+ E+++ ++ +
Subjt:  VMVVESVTKAKVIQNYLGDMFVVLPSHGHVRDLAAKSGSVRPDDDFSMVWEVPSAAYTHLKNMKVSLNGAENLILASDPDREGEAIAWHIIEMLQHEDAL

Query:  HEGISIARVVFHEITEASIKSALQSPRVIDANLVQAYLARRALDYLIGFNISPLLWRKLPGCRSAGRVQSAALALICDREMEIDEFHAQEYWTIDIKLNQ
               RV F+EIT+ +I  A+++PR +DANLV A  ARRALDYL+GF +SPLLWRKLPGC+SAGRVQS AL LIC+RE EI+ F ++EYW I +K+  
Subjt:  HEGISIARVVFHEITEASIKSALQSPRVIDANLVQAYLARRALDYLIGFNISPLLWRKLPGCRSAGRVQSAALALICDREMEIDEFHAQEYWTIDIKLNQ

Query:  KDTCSSVEDFAVPAHLTHFDSKKLNQFAISSNMEAKNIESVLKSVNFQVLSSKKNKVRRNPPMPYITSTLQQDAASKFNFSTTYTMQVAQKLYEGIQLAD
            S+ E F   A LTH + +KL +F+I +  +AK++   LKS NF V   +K + +R P  P+ITS+LQQ+AA K  FS   TMQ+AQKLYEG+ +  
Subjt:  KDTCSSVEDFAVPAHLTHFDSKKLNQFAISSNMEAKNIESVLKSVNFQVLSSKKNKVRRNPPMPYITSTLQQDAASKFNFSTTYTMQVAQKLYEGIQLAD

Query:  GKAAGLITYLRTDGLHISDEAVKDIRSLIMQRYGKDFVPESGPKYFKKVKNAQEAHEAIRPTDVQRLPSMLVGILDEDSHKLYSLIWLRTVACQMESSIT
         +  GLITY+RTDG+ +S++A+ DIR LI + YG  ++P S   Y  KVKNAQEAHEAIRPT++   P  L   L++D +KLY LIW RT+ACQME+ I 
Subjt:  GKAAGLITYLRTDGLHISDEAVKDIRSLIMQRYGKDFVPESGPKYFKKVKNAQEAHEAIRPTDVQRLPSMLVGILDEDSHKLYSLIWLRTVACQMESSIT

Query:  EQV
        + V
Subjt:  EQV

Q68X45 DNA topoisomerase 1

3.6e-105

49.63

Show/hide

Query:  VMVVESVTKAKVIQNYLGDMFVVLPSHGHVRDLAAKSGSVRPDDDFSMVWEVPSAAYTHLKNMKVSLNGAENLILASDPDREGEAIAWHIIEMLQHEDAL
        +++VES  KAK I  YLGD F V+ S GH+RDL +K GSV PD +F+M +++   A  ++  +      AE + LA+DPDREGE+I+WH+ E+++ ++ +
Subjt:  VMVVESVTKAKVIQNYLGDMFVVLPSHGHVRDLAAKSGSVRPDDDFSMVWEVPSAAYTHLKNMKVSLNGAENLILASDPDREGEAIAWHIIEMLQHEDAL

Query:  HEGISIARVVFHEITEASIKSALQSPRVIDANLVQAYLARRALDYLIGFNISPLLWRKLPGCRSAGRVQSAALALICDREMEIDEFHAQEYWTIDIKLNQ
               RV F+EIT+ +I  A+++PR +D NLV A  ARRALDYL+GF +SPLLWRKLPGC+SAGRVQS AL LICDRE EI+ F A+EYW I +K+  
Subjt:  HEGISIARVVFHEITEASIKSALQSPRVIDANLVQAYLARRALDYLIGFNISPLLWRKLPGCRSAGRVQSAALALICDREMEIDEFHAQEYWTIDIKLNQ

Query:  KDTCSSVEDFAVPAHLTHFDSKKLNQFAISSNMEAKNIESVLKSVNFQVLSSKKNKVRRNPPMPYITSTLQQDAASKFNFSTTYTMQVAQKLYEGIQLAD
            S+ E F   A LTH + +KL +F+I +  EAK++   LK   F V   +K + +R P  P+ITS+LQQ+AA K  FS   TMQ+AQKLYEG+ +  
Subjt:  KDTCSSVEDFAVPAHLTHFDSKKLNQFAISSNMEAKNIESVLKSVNFQVLSSKKNKVRRNPPMPYITSTLQQDAASKFNFSTTYTMQVAQKLYEGIQLAD

Query:  GKAAGLITYLRTDGLHISDEAVKDIRSLIMQRYGKDFVPESGPKYFKKVKNAQEAHEAIRPTDVQRLPSMLVGILDEDSHKLYSLIWLRTVACQMESSIT
         +  GLITY+RTDG+ +S++A+ DIR LI + YG  ++P +   Y  KVKNAQEAHEAIRPT++   P  L   L++D +KLY LIW RT+ACQME+ I 
Subjt:  GKAAGLITYLRTDGLHISDEAVKDIRSLIMQRYGKDFVPESGPKYFKKVKNAQEAHEAIRPTDVQRLPSMLVGILDEDSHKLYSLIWLRTVACQMESSIT

Query:  EQV
        + V
Subjt:  EQV

Q92IH1 DNA topoisomerase 1

2.1e-105

49.38

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Query:  VMVVESVTKAKVIQNYLGDMFVVLPSHGHVRDLAAKSGSVRPDDDFSMVWEVPSAAYTHLKNMKVSLNGAENLILASDPDREGEAIAWHIIEMLQHEDAL
        +++VES  KAK I  YLGD F V+ S GH+RDL +K GSV PD++F+M +++   A  ++  +      A+ + LA+DPDREGE+I+WH+ E+++ ++ +
Subjt:  VMVVESVTKAKVIQNYLGDMFVVLPSHGHVRDLAAKSGSVRPDDDFSMVWEVPSAAYTHLKNMKVSLNGAENLILASDPDREGEAIAWHIIEMLQHEDAL

Query:  HEGISIARVVFHEITEASIKSALQSPRVIDANLVQAYLARRALDYLIGFNISPLLWRKLPGCRSAGRVQSAALALICDREMEIDEFHAQEYWTIDIKLNQ
               RV F+EIT+ +I  A+++PR +D NLV A  ARRALDYL+GF +SPLLWRKLPGC+SAGRVQS AL LIC+RE EI+ F ++EYW I +K+  
Subjt:  HEGISIARVVFHEITEASIKSALQSPRVIDANLVQAYLARRALDYLIGFNISPLLWRKLPGCRSAGRVQSAALALICDREMEIDEFHAQEYWTIDIKLNQ

Query:  KDTCSSVEDFAVPAHLTHFDSKKLNQFAISSNMEAKNIESVLKSVNFQVLSSKKNKVRRNPPMPYITSTLQQDAASKFNFSTTYTMQVAQKLYEGIQLAD
            S+ E F   A LTH + +KL +F+I +   AK++   LKS  F V   +K + +R P  P+ITS+LQQ+AA K  FS   TMQ+AQKLYEG+ +  
Subjt:  KDTCSSVEDFAVPAHLTHFDSKKLNQFAISSNMEAKNIESVLKSVNFQVLSSKKNKVRRNPPMPYITSTLQQDAASKFNFSTTYTMQVAQKLYEGIQLAD

Query:  GKAAGLITYLRTDGLHISDEAVKDIRSLIMQRYGKDFVPESGPKYFKKVKNAQEAHEAIRPTDVQRLPSMLVGILDEDSHKLYSLIWLRTVACQMESSIT
         +  GLITY+RTDG+ +S++A+ DIR LI + YG  ++P S   Y  KVKNAQEAHEAIRPT++   P  L   LD+D +KLY LIW RT+ACQME+ I 
Subjt:  GKAAGLITYLRTDGLHISDEAVKDIRSLIMQRYGKDFVPESGPKYFKKVKNAQEAHEAIRPTDVQRLPSMLVGILDEDSHKLYSLIWLRTVACQMESSIT

Query:  EQV
        + V
Subjt:  EQV

Q9ZDK2 DNA topoisomerase 1

1.8e-104

48.64

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Query:  VMVVESVTKAKVIQNYLGDMFVVLPSHGHVRDLAAKSGSVRPDDDFSMVWEVPSAAYTHLKNMKVSLNGAENLILASDPDREGEAIAWHIIEMLQHEDAL
        +++VES  KAK I  YLGD F V+ S GH+RDL +K GSV PD +F M +++   A  ++  +      AE + LA+DPDREGE+I+WH+ E+++ ++ +
Subjt:  VMVVESVTKAKVIQNYLGDMFVVLPSHGHVRDLAAKSGSVRPDDDFSMVWEVPSAAYTHLKNMKVSLNGAENLILASDPDREGEAIAWHIIEMLQHEDAL

Query:  HEGISIARVVFHEITEASIKSALQSPRVIDANLVQAYLARRALDYLIGFNISPLLWRKLPGCRSAGRVQSAALALICDREMEIDEFHAQEYWTIDIKLNQ
               RV F+EIT+ +I +A+ +PR +D NLV A  ARRALDYL+GF +SPLLWRKLPGC+SAGRVQS AL LICDRE EI+ F ++EYW I +K+  
Subjt:  HEGISIARVVFHEITEASIKSALQSPRVIDANLVQAYLARRALDYLIGFNISPLLWRKLPGCRSAGRVQSAALALICDREMEIDEFHAQEYWTIDIKLNQ

Query:  KDTCSSVEDFAVPAHLTHFDSKKLNQFAISSNMEAKNIESVLKSVNFQVLSSKKNKVRRNPPMPYITSTLQQDAASKFNFSTTYTMQVAQKLYEGIQLAD
         +      +    A LTH + +KL +F+I +  EAK++   LK   F V   +K + +R P  P+ITS+LQQ+AA K  FS   TMQ+AQKLYEG+ +  
Subjt:  KDTCSSVEDFAVPAHLTHFDSKKLNQFAISSNMEAKNIESVLKSVNFQVLSSKKNKVRRNPPMPYITSTLQQDAASKFNFSTTYTMQVAQKLYEGIQLAD

Query:  GKAAGLITYLRTDGLHISDEAVKDIRSLIMQRYGKDFVPESGPKYFKKVKNAQEAHEAIRPTDVQRLPSMLVGILDEDSHKLYSLIWLRTVACQMESSIT
         +  GLITY+RTDG+ +S++A+ DIR LI + YG  ++P     Y  KVKNAQEAHEAIRPT++   P  L   L++D +KLY LIW RT+ACQME+ I 
Subjt:  GKAAGLITYLRTDGLHISDEAVKDIRSLIMQRYGKDFVPESGPKYFKKVKNAQEAHEAIRPTDVQRLPSMLVGILDEDSHKLYSLIWLRTVACQMESSIT

Query:  EQV
        + V
Subjt:  EQV

Arabidopsis top hits

e value

%identity

Alignment

AT4G31210.1 DNA topoisomerase, type IA, core

4.4e-167

57.45

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Query:  GATKEANLVSSSSSSSIRKTSKGLNEKKSSSKKKKEAISSANGNVEAVCKDGQSMSF-----------DSSSTDLDVVQDPKKNVTESSSKDSASTQQQP
        G   E +  +S +S+  + T+   ++++  +KK ++  SS    +EAV  D   +S             SSS   +V ++      +S +  ++ ++QQ 
Subjt:  GATKEANLVSSSSSSSIRKTSKGLNEKKSSSKKKKEAISSANGNVEAVCKDGQSMSF-----------DSSSTDLDVVQDPKKNVTESSSKDSASTQQQP

Query:  NKKKRNSSRKKEVSKDTNKLPQEANVVFDAKWTSQGRTSFKQLYPPMGKSVMVVESVTKAKVIQNYLGDMFVVLPSHGHVRDLAAKSGSVRPDDDFSMVW
         K  + S   K+       +PQ      +     +G+ + K LYPP GKSV+VVES+TKAK+IQ YLGDM+ VLPS+GH+RDLA +SGSVRPDDDFSMVW
Subjt:  NKKKRNSSRKKEVSKDTNKLPQEANVVFDAKWTSQGRTSFKQLYPPMGKSVMVVESVTKAKVIQNYLGDMFVVLPSHGHVRDLAAKSGSVRPDDDFSMVW

Query:  EVPSAAYTHLKNMKVSLNGAENLILASDPDREGEAIAWHIIEMLQHEDALHEGISIARVVFHEITEASIKSALQSPRVIDANLVQAYLARRALDYLIGFN
        EVPS+A+TH+K++KV+LNGAENLILASDPDREGEAIAWHIIEMLQ + ALHE +++ARVVFHEITE++IKSALQSPR ID +LV AYLARRALDYLIGFN
Subjt:  EVPSAAYTHLKNMKVSLNGAENLILASDPDREGEAIAWHIIEMLQHEDALHEGISIARVVFHEITEASIKSALQSPRVIDANLVQAYLARRALDYLIGFN

Query:  ISPLLWRKLPGCRSAGRVQSAALALICDREMEIDEFHAQEYWTIDIKLNQKDTCSSVEDFAVPAHLTHFDSKKLNQFAISSNMEAKNIESVLKSVNFQVL
        ISPLLWRKLPGC SAGRVQSAALAL+CDRE EID F  QEYWT+ IK+  KD  ++       AHLT  +SK+LNQ +ISS   A++IE  +KS  F V 
Subjt:  ISPLLWRKLPGCRSAGRVQSAALALICDREMEIDEFHAQEYWTIDIKLNQKDTCSSVEDFAVPAHLTHFDSKKLNQFAISSNMEAKNIESVLKSVNFQVL

Query:  SSKKNKVRRNPPMPYITSTLQQDAASKFNFSTTYTMQVAQKLYEGIQLADGKAAGLITYLRTDGLHISDEAVKDIRSLIMQRYGKDFVPESGPKYFKKVK
         +K +  R+NPP PYITSTLQQDAA+K +FST +TM++AQKLYEG+QL+DGK+AGLITY+RTDGLHI+DEA+KDI+SL+ +RYGK+F  +S  KYFKKVK
Subjt:  SSKKNKVRRNPPMPYITSTLQQDAASKFNFSTTYTMQVAQKLYEGIQLADGKAAGLITYLRTDGLHISDEAVKDIRSLIMQRYGKDFVPESGPKYFKKVK

Query:  NAQEAHEAIRPTDVQRLPSMLVGILDEDSHKLYSLIWLRTVACQMESSITEQVRMHV
        NAQEAHEAIRPTD++RLPS +  +LD DS KLY+LIW R VACQME +   Q+++ +
Subjt:  NAQEAHEAIRPTDVQRLPSMLVGILDEDSHKLYSLIWLRTVACQMESSITEQVRMHV

AT5G63920.1 topoisomerase 3alpha

2.4e-11

21.72

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Query:  KNMKVSLNGAENLILASDPDREGEAIAWHIIEMLQHEDALHEGISIARVVFHEITEASIKSALQSPRVIDANLVQAYLARRALDYLIGFNIS---PLLWR
        K ++     ++ L+L  D DREGE IA+ ++++ +   A+   + I R  F  + +  I  A+Q+ R  +    +A  AR+ +D  IG + +    +L R
Subjt:  KNMKVSLNGAENLILASDPDREGEAIAWHIIEMLQHEDALHEGISIARVVFHEITEASIKSALQSPRVIDANLVQAYLARRALDYLIGFNIS---PLLWR

Query:  KLPGCRSAGRVQS----------AALALICDREMEIDEFHAQEYWTIDIKLNQKDTCSSVEDFAVPAHLTHFDSKKLNQFAISSNMEAKNIESVLKSVNF
              S G  +S            L  I +R  EI     +E+WTI+     ++  ++     +  HL  + S  +              E  ++    
Subjt:  KLPGCRSAGRVQS----------AALALICDREMEIDEFHAQEYWTIDIKLNQKDTCSSVEDFAVPAHLTHFDSKKLNQFAISSNMEAKNIESVLKSVNF

Query:  QVLSSKKNKVR-RNPPMPYITSTLQQDAASKFNFSTTYTMQVAQKLYEGIQLADGKAAGLITYLRTDGLHISDEAVKDIRSLIMQR--------YGKDFV
         V++    + R + PP P  T  L++ A+  F  S+ +TM+VA++LY+         AG I+Y RT+    S     D+R+++ ++        Y +  +
Subjt:  QVLSSKKNKVR-RNPPMPYITSTLQQDAASKFNFSTTYTMQVAQKLYEGIQLADGKAAGLITYLRTDGLHISDEAVKDIRSLIMQR--------YGKDFV

Query:  PESGPKYFKKVKNAQE--AHEAIRPTDVQRLPSMLVGILDEDSHKLYSLIWLRTVACQMESSITEQVRMHVPL
           G  +        +  AH  I PT      S        D   +Y L+    +AC  + ++  +  + + +
Subjt:  PESGPKYFKKVKNAQE--AHEAIRPTDVQRLPSMLVGILDEDSHKLYSLIWLRTVACQMESSITEQVRMHVPL

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGAGCCAGCTTCAGAGGAGCCTGTTATTCGCTTCTTCTTCCACTAACGCAATTTCTTCCTCTGTATTTTCTACTGCTCCCTCTGCTTCTTCCTGCTCCCGACTCCGTCC
TTTCACGACCAAGTTGCAGGGCAGCAATCTTCAAAATTATACTAGCAAATGCATACCTGTTTTACCATTTCCCACTGCTTGTAGTTCAGCCAGATGTTCTCAGCTTGTTT
TTAGAAAAGGTGGAGTAACATTTGCTGTCAAGACTGTACGTGCAAAGGCTGGGCCAAGTGTTTTCACTCTGTATTCCCGCTTACCATTGAGATTTCCTCATTCTGCTGCA
TCACCAAATGCTTCTAACCAACAGCTGTTAAATGGCACTTTTACACATAAACCTCCTAATTATAGAGCGTTTGGAAGGAAGTTCTTTTCTAACACAACAGAAGCAAATTC
AAGCAATCAGTTGGTTGGAGCTACAAAGGAGGCAAATCTAGTTTCATCTAGTTCTTCTTCATCCATTAGGAAAACATCCAAGGGCTTGAATGAAAAGAAGTCTTCGAGCA
AGAAAAAGAAAGAAGCTATTTCTTCAGCCAATGGCAATGTTGAAGCCGTATGCAAGGATGGTCAGTCAATGAGCTTTGATAGTAGCAGTACTGACCTGGATGTTGTACAA
GATCCAAAGAAAAATGTAACTGAGAGCAGTTCCAAAGATTCTGCTTCAACCCAACAACAACCCAATAAGAAAAAACGTAACTCCAGCAGAAAAAAAGAAGTTTCAAAAGA
TACTAATAAGTTGCCACAGGAGGCAAACGTCGTATTTGATGCAAAGTGGACATCTCAGGGAAGGACCAGTTTCAAGCAGCTATATCCCCCAATGGGAAAATCTGTTATGG
TGGTGGAATCTGTTACAAAGGCAAAAGTTATTCAGAATTATCTTGGTGATATGTTTGTGGTGCTACCTAGCCATGGCCATGTTAGAGACTTGGCTGCGAAGTCAGGTTCT
GTAAGACCTGATGATGACTTCAGTATGGTGTGGGAGGTTCCTTCTGCTGCTTATACTCATCTCAAAAACATGAAAGTTTCTTTAAATGGAGCAGAAAACCTTATTCTTGC
ATCTGATCCAGATCGAGAAGGTGAAGCTATTGCGTGGCATATAATTGAGATGTTGCAGCACGAGGATGCTCTACATGAAGGTATTAGCATAGCGAGGGTTGTTTTTCATG
AAATAACAGAGGCTTCTATAAAGAGTGCCCTGCAATCTCCTAGAGTAATTGATGCAAACTTGGTCCAGGCTTACCTTGCACGGCGTGCTTTAGATTATTTGATTGGGTTT
AATATTTCACCATTATTATGGAGGAAATTACCAGGTTGCCGATCAGCTGGGCGTGTTCAATCAGCTGCACTCGCCCTAATATGTGACAGAGAAATGGAAATTGATGAATT
TCATGCACAAGAATATTGGACTATTGACATTAAGTTGAACCAAAAAGATACTTGTTCTTCAGTGGAAGATTTTGCAGTCCCTGCGCATTTGACCCATTTTGATTCTAAGA
AGTTAAATCAATTTGCAATTAGCTCCAACATGGAGGCAAAGAATATAGAATCTGTGCTGAAATCAGTAAATTTTCAAGTGCTTAGCTCTAAAAAAAATAAAGTGCGGAGA
AACCCTCCAATGCCATATATAACATCTACACTTCAGCAAGATGCAGCAAGTAAATTTAATTTCTCAACAACTTACACAATGCAGGTTGCCCAGAAACTTTATGAGGGAAT
TCAACTGGCTGACGGAAAGGCAGCTGGCCTAATAACTTATCTTAGAACAGATGGGCTACATATCTCTGATGAAGCTGTTAAGGACATTCGCTCCCTGATTATGCAACGAT
ATGGGAAGGATTTTGTACCTGAAAGTGGGCCCAAATATTTTAAGAAGGTGAAGAATGCTCAAGAGGCTCATGAAGCAATCAGACCCACTGATGTGCAACGATTACCCTCA
ATGCTAGTGGGAATACTTGACGAAGATTCTCACAAACTATACTCTCTTATTTGGCTCAGAACGGTGGCATGTCAAATGGAATCTTCTATCACTGAACAGGTCAGGATGCA
TGTTCCATTATGCTATTTATTTTCTCTTATTTAG

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MSQLQRSLLFASSSTNAISSSVFSTAPSASSCSRLRPFTTKLQGSNLQNYTSKCIPVLPFPTACSSARCSQLVFRKGGVTFAVKTVRAKAGPSVFTLYSRLPLRFPHSAA
SPNASNQQLLNGTFTHKPPNYRAFGRKFFSNTTEANSSNQLVGATKEANLVSSSSSSSIRKTSKGLNEKKSSSKKKKEAISSANGNVEAVCKDGQSMSFDSSSTDLDVVQ
DPKKNVTESSSKDSASTQQQPNKKKRNSSRKKEVSKDTNKLPQEANVVFDAKWTSQGRTSFKQLYPPMGKSVMVVESVTKAKVIQNYLGDMFVVLPSHGHVRDLAAKSGS
VRPDDDFSMVWEVPSAAYTHLKNMKVSLNGAENLILASDPDREGEAIAWHIIEMLQHEDALHEGISIARVVFHEITEASIKSALQSPRVIDANLVQAYLARRALDYLIGF
NISPLLWRKLPGCRSAGRVQSAALALICDREMEIDEFHAQEYWTIDIKLNQKDTCSSVEDFAVPAHLTHFDSKKLNQFAISSNMEAKNIESVLKSVNFQVLSSKKNKVRR
NPPMPYITSTLQQDAASKFNFSTTYTMQVAQKLYEGIQLADGKAAGLITYLRTDGLHISDEAVKDIRSLIMQRYGKDFVPESGPKYFKKVKNAQEAHEAIRPTDVQRLPS
MLVGILDEDSHKLYSLIWLRTVACQMESSITEQVRMHVPLCYLFSLI

IVF0004488 (gene) of Melon (IVF77) v1 genome