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IVF0004528 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0004528
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionB box-type domain-containing protein
Genome locationchr04:8451569..8453645
RNA-Seq ExpressionIVF0004528
SyntenyIVF0004528
Gene Ontology termsGO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004146838.1 zinc finger protein CONSTANS-LIKE 4 [Cucumis sativus]3.22e-8379.44Show/hide
Query:  SVCEGCVEVHDGKCEQDRRRDNEVEVDDGDDFVDGEGSIVMREVIVRKTMMGKMMTMRKKMMRTEKNQVVPWSYASSS-PPPPPTVTSSSEGEISAGAGV
        SVCEGCV+VHDGKC+Q+RRR+NEVEVDDGDDFVD EG          +   G+     ++     +NQVVPWSYASSS PPPPPTVTSSSEGEISAGAGV
Subjt:  SVCEGCVEVHDGKCEQDRRRDNEVEVDDGDDFVDGEGSIVMREVIVRKTMMGKMMTMRKKMMRTEKNQVVPWSYASSS-PPPPPTVTSSSEGEISAGAGV

Query:  ASKRMREYGVDLDSDDEIESCSAPQSTRPFFNDEATSSSSLRPLKQARVAGPIQSTTSTPDDEACKAELKSTAVVRSIQR
        ASKRMREYGVDLDSDDEIESCSAPQSTRPFFNDEATSSSSLRPLKQARV GP QS TSTPDDEACKAELKSTAVVRSIQR
Subjt:  ASKRMREYGVDLDSDDEIESCSAPQSTRPFFNDEATSSSSLRPLKQARVAGPIQSTTSTPDDEACKAELKSTAVVRSIQR

XP_008454616.1 PREDICTED: zinc finger protein CONSTANS-LIKE 4 [Cucumis melo]1.11e-8883.89Show/hide
Query:  SVCEGCVEVHDGKCEQDRRRDNEVEVDDGDDFVDGEGSIVMREVIVRKTMMGKMMTMRKKMMRTEKNQVVPWSYASSS-PPPPPTVTSSSEGEISAGAGV
        SVCEGCVEVHDGKCEQDRRRDNEVEVDDGDDFVDGEG         ++   G+     ++     +NQVVPWSYASSS PPPPPTVTSSSEGEISAGAGV
Subjt:  SVCEGCVEVHDGKCEQDRRRDNEVEVDDGDDFVDGEGSIVMREVIVRKTMMGKMMTMRKKMMRTEKNQVVPWSYASSS-PPPPPTVTSSSEGEISAGAGV

Query:  ASKRMREYGVDLDSDDEIESCSAPQSTRPFFNDEATSSSSLRPLKQARVAGPIQSTTSTPDDEACKAELKSTAVVRSIQR
        ASKRMREYGVDLDSDDEIESCSAPQSTRPFFNDEATSSSSLRPLKQARVAGPIQSTTSTPDDEACKAELKSTAVVRSIQR
Subjt:  ASKRMREYGVDLDSDDEIESCSAPQSTRPFFNDEATSSSSLRPLKQARVAGPIQSTTSTPDDEACKAELKSTAVVRSIQR

XP_022139730.1 protein BFR2 [Momordica charantia]2.71e-6668.62Show/hide
Query:  SVCEGCVEVHDGKCEQ----DRRRDNEVEVDDGDDFVDGEGSIVMREVIVRKTMMGKMMTMRKKMMRTE----KNQVVPWSYAS-SSPPPPPTVTSSSEG
        SVCEGCVEVH GKCEQ    +RRRDNE  VDDGDD  DGEG          +    +     ++    E    +NQVVPWSYAS SSPPPPPTVTSSSEG
Subjt:  SVCEGCVEVHDGKCEQ----DRRRDNEVEVDDGDDFVDGEGSIVMREVIVRKTMMGKMMTMRKKMMRTE----KNQVVPWSYAS-SSPPPPPTVTSSSEG

Query:  EISAGAGVASKRMREYGVDLDSDDEIESCSAPQSTRPFFNDEATSSSSLRPLKQARVAGPIQSTTSTPDDEACKAELKSTAVVRSIQR
        E+SAGAGV SKRMR+YGVDLDSDDEIES SA Q TRPFFNDEATSSSSLRPLKQARV G  QS ++ PDD ACK EL+STAVVRSIQR
Subjt:  EISAGAGVASKRMREYGVDLDSDDEIESCSAPQSTRPFFNDEATSSSSLRPLKQARVAGPIQSTTSTPDDEACKAELKSTAVVRSIQR

XP_023535120.1 protein BFR2-like [Cucurbita pepo subsp. pepo]3.39e-6167.03Show/hide
Query:  SVCEGCVEVHDGKCEQ----DRRRDNEVEVDDGDDFVDGEGSIVMREVIVRKTMMGKMMTMRKKMMRTEKNQVVPWSYASSS-PPPPPTVTSSSEGEISA
        SVCEGCVEVH GKCE+    +RRRDNE EVDDGDDF DGEG          +           +     +NQVVPWS ASSS PPPPPTVTSSSEGEIS 
Subjt:  SVCEGCVEVHDGKCEQ----DRRRDNEVEVDDGDDFVDGEGSIVMREVIVRKTMMGKMMTMRKKMMRTEKNQVVPWSYASSS-PPPPPTVTSSSEGEISA

Query:  GAGVASKRMREYGVDLDSDDEIESCSAPQSTRPFFNDEATSSSSLRPLKQARVAGPIQS-TTSTPDDEACKAELKSTAVVRSIQR
        GAGV SKRMRE  VDL+SDD+IE  SA QSTRPFFN+EATSSSS RPLKQARV GP QS +T+TPDDEA KA+LKS +VVRSIQ+
Subjt:  GAGVASKRMREYGVDLDSDDEIESCSAPQSTRPFFNDEATSSSSLRPLKQARVAGPIQS-TTSTPDDEACKAELKSTAVVRSIQR

XP_038899463.1 nucleolin [Benincasa hispida]3.85e-6970Show/hide
Query:  SVCEGCVEVHDGKCE----QDRRRDNEVEVDDGDDFVDGEGSIVMREVIVRKTMMGKMMTMRKKMMRTEK------NQVVPWSYASSSP-PPPPTVTSSS
        SVCEGCVEVH GKCE    Q+RRRDNE EVD+GD FVDGEG          +   G       +    E+      NQVVPWSYASSS  PPPP  TSSS
Subjt:  SVCEGCVEVHDGKCE----QDRRRDNEVEVDDGDDFVDGEGSIVMREVIVRKTMMGKMMTMRKKMMRTEK------NQVVPWSYASSSP-PPPPTVTSSS

Query:  EGEISAGAGVASKRMREYGVDLDSDDEIESCSAPQSTRPFFNDEATSSSSLRPLKQARVAGPIQSTTSTPDDEACKAELKSTAVVRSIQR
        EGEISA AGVASKRMREYGVDLDS+DEIE  SAPQ TRPFFNDEATSSSSLRPLKQARV GP QS TS PDDEACKA++KSTAVVRSIQR
Subjt:  EGEISAGAGVASKRMREYGVDLDSDDEIESCSAPQSTRPFFNDEATSSSSLRPLKQARVAGPIQSTTSTPDDEACKAELKSTAVVRSIQR

TrEMBL top hitse value%identityAlignment
A0A0A0LCX6 B box-type domain-containing protein1.9e-6579.44Show/hide
Query:  SVCEGCVEVHDGKCEQDRRRDNEVEVDDGDDFVDGEGSIVMREVIVRKTMMGKMMTMRKKMMRTEKNQVVPWSYA-SSSPPPPPTVTSSSEGEISAGAGV
        SVCEGCV+VHDGKC+Q+RRR+NEVEVDDGDDFVD EG          +   G+     ++     +NQVVPWSYA SSSPPPPPTVTSSSEGEISAGAGV
Subjt:  SVCEGCVEVHDGKCEQDRRRDNEVEVDDGDDFVDGEGSIVMREVIVRKTMMGKMMTMRKKMMRTEKNQVVPWSYA-SSSPPPPPTVTSSSEGEISAGAGV

Query:  ASKRMREYGVDLDSDDEIESCSAPQSTRPFFNDEATSSSSLRPLKQARVAGPIQSTTSTPDDEACKAELKSTAVVRSIQR
        ASKRMREYGVDLDSDDEIESCSAPQSTRPFFNDEATSSSSLRPLKQARV GP QS TSTPDDEACKAELKSTAVVRSIQR
Subjt:  ASKRMREYGVDLDSDDEIESCSAPQSTRPFFNDEATSSSSLRPLKQARVAGPIQSTTSTPDDEACKAELKSTAVVRSIQR

A0A1S3BZT7 zinc finger protein CONSTANS-LIKE 41.3e-6983.89Show/hide
Query:  SVCEGCVEVHDGKCEQDRRRDNEVEVDDGDDFVDGEGSIVMREVIVRKTMMGKMMTMRKKMMRTEKNQVVPWSYA-SSSPPPPPTVTSSSEGEISAGAGV
        SVCEGCVEVHDGKCEQDRRRDNEVEVDDGDDFVDGEG         ++   G+     ++     +NQVVPWSYA SSSPPPPPTVTSSSEGEISAGAGV
Subjt:  SVCEGCVEVHDGKCEQDRRRDNEVEVDDGDDFVDGEGSIVMREVIVRKTMMGKMMTMRKKMMRTEKNQVVPWSYA-SSSPPPPPTVTSSSEGEISAGAGV

Query:  ASKRMREYGVDLDSDDEIESCSAPQSTRPFFNDEATSSSSLRPLKQARVAGPIQSTTSTPDDEACKAELKSTAVVRSIQR
        ASKRMREYGVDLDSDDEIESCSAPQSTRPFFNDEATSSSSLRPLKQARVAGPIQSTTSTPDDEACKAELKSTAVVRSIQR
Subjt:  ASKRMREYGVDLDSDDEIESCSAPQSTRPFFNDEATSSSSLRPLKQARVAGPIQSTTSTPDDEACKAELKSTAVVRSIQR

A0A5D3B734 Zinc finger protein CONSTANS-LIKE 41.3e-6983.89Show/hide
Query:  SVCEGCVEVHDGKCEQDRRRDNEVEVDDGDDFVDGEGSIVMREVIVRKTMMGKMMTMRKKMMRTEKNQVVPWSYA-SSSPPPPPTVTSSSEGEISAGAGV
        SVCEGCVEVHDGKCEQDRRRDNEVEVDDGDDFVDGEG         ++   G+     ++     +NQVVPWSYA SSSPPPPPTVTSSSEGEISAGAGV
Subjt:  SVCEGCVEVHDGKCEQDRRRDNEVEVDDGDDFVDGEGSIVMREVIVRKTMMGKMMTMRKKMMRTEKNQVVPWSYA-SSSPPPPPTVTSSSEGEISAGAGV

Query:  ASKRMREYGVDLDSDDEIESCSAPQSTRPFFNDEATSSSSLRPLKQARVAGPIQSTTSTPDDEACKAELKSTAVVRSIQR
        ASKRMREYGVDLDSDDEIESCSAPQSTRPFFNDEATSSSSLRPLKQARVAGPIQSTTSTPDDEACKAELKSTAVVRSIQR
Subjt:  ASKRMREYGVDLDSDDEIESCSAPQSTRPFFNDEATSSSSLRPLKQARVAGPIQSTTSTPDDEACKAELKSTAVVRSIQR

A0A6J1CD44 protein BFR21.4e-5268.62Show/hide
Query:  SVCEGCVEVHDGKCE----QDRRRDNEVEVDDGDDFVDGEGSIVMR----EVIVRKTMMGKMMTMRKKMMRTEKNQVVPWSYAS-SSPPPPPTVTSSSEG
        SVCEGCVEVH GKCE    Q+RRRDNE  VDDGDD  DGEG         E    +    +     ++     +NQVVPWSYAS SSPPPPPTVTSSSEG
Subjt:  SVCEGCVEVHDGKCE----QDRRRDNEVEVDDGDDFVDGEGSIVMR----EVIVRKTMMGKMMTMRKKMMRTEKNQVVPWSYAS-SSPPPPPTVTSSSEG

Query:  EISAGAGVASKRMREYGVDLDSDDEIESCSAPQSTRPFFNDEATSSSSLRPLKQARVAGPIQSTTSTPDDEACKAELKSTAVVRSIQR
        E+SAGAGV SKRMR+YGVDLDSDDEIES SA Q TRPFFNDEATSSSSLRPLKQARV G  QS ++ PDD ACK EL+STAVVRSIQR
Subjt:  EISAGAGVASKRMREYGVDLDSDDEIESCSAPQSTRPFFNDEATSSSSLRPLKQARVAGPIQSTTSTPDDEACKAELKSTAVVRSIQR

A0A6J1IMI6 protein BFR26.1e-4865.41Show/hide
Query:  SVCEGCVEVHDGKCEQ----DRRRDNEVEVDDGDDFVDGEGSIVMREVIVRKTMMGKMMTMRKKMMRTE-KNQVVPWSYA-SSSPPPPPTVTSSSEGEIS
        SVCEGCVEVH GKC +    +RRRDNE EVDDGDDF DGEG          +      +    +    + +NQVVPWS A SSSPPPPPTVTSSSEGEIS
Subjt:  SVCEGCVEVHDGKCEQ----DRRRDNEVEVDDGDDFVDGEGSIVMREVIVRKTMMGKMMTMRKKMMRTE-KNQVVPWSYA-SSSPPPPPTVTSSSEGEIS

Query:  AGAGVASKRMREYGVDLDSDDEIESCSAPQSTRPFFNDEATSSSSLRPLKQARVAGPIQSTTSTPDDEACKAELKSTAVVRSIQR
         GAGV SKRMR+  VDL+SDD IE  SA QSTRPFFN+EATSSSS RPLKQ+RV GP QS ++TPDDEA KA+LKST+VVRSIQ+
Subjt:  AGAGVASKRMREYGVDLDSDDEIESCSAPQSTRPFFNDEATSSSSLRPLKQARVAGPIQSTTSTPDDEACKAELKSTAVVRSIQR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATGCCAGTCGCCGACTCCTTGGGCCGCCTCTGGTCGCAAACTTACACCCACGGTCTGTGTGTGAGGGATGTGTTGAAGTCCATGATGGTAAATGCGAGCAGGACCG
TCGTAGAGACAACGAGGTGGAAGTTGATGATGGTGATGATTTTGTCGATGGTGAAGGTTCGATAGTTATGAGGGAGGTGATAGTCAGGAAGACGATGATGGGGAAGATGA
TGACGATGAGGAAGAAGATGATGAGGACGGAGAAAAACCAGGTGGTGCCCTGGTCCTATGCATCTTCTTCACCACCACCGCCCCCGACAGTGACTTCTAGCAGCGAGGGT
GAGATTTCAGCCGGCGCTGGTGTCGCCTCGAAGCGGATGAGAGAATACGGCGTCGATCTCGATTCCGATGACGAAATCGAGTCGTGTTCTGCACCACAGAGTACAAGGCC
ATTTTTCAATGACGAAGCAACTTCGTCAAGTTCCCTTAGGCCACTGAAGCAAGCAAGAGTTGCAGGACCGATCCAATCAACCACATCCACTCCAGATGATGAAGCTTGTA
AAGCCGAGTTAAAATCCACGGCTGTCGTTAGATCTATCCAGAGGACTCCAGAATCGTCTTCCCACAGACATTAA
mRNA sequenceShow/hide mRNA sequence
CTTTCGGAATGAACAGATAAAAGGGAAAAGGAAGAACAAGAAAGAGAAGAAAAAATCAGCGGCTGAAAAATCAAAGAGGTTTATAAGAACAACATCCACAACAATATCAA
ACACTGAATCTGAGATTTCGAAGAACACACAAAAAAATGAAGAAGTGTGAGCTTTGTGGGCATCAAGCCAGGATGTTCTGCGAGTCCGATCAAGCTAACCTGTGTTGGGA
CTGCGATGAGAAGGTCACTGTGCTAATTTCTCGTTGCTAAACATTCTCGGAGCCTTCTTTGTCATGTATGCCAGTCGCCGACTCCTTGGGCCGCCTCTGGTCGCAAACTT
ACACCCACGGTCTGTGTGTGAGGGATGTGTTGAAGTCCATGATGGTAAATGCGAGCAGGACCGTCGTAGAGACAACGAGGTGGAAGTTGATGATGGTGATGATTTTGTCG
ATGGTGAAGGTTCGATAGTTATGAGGGAGGTGATAGTCAGGAAGACGATGATGGGGAAGATGATGACGATGAGGAAGAAGATGATGAGGACGGAGAAAAACCAGGTGGTG
CCCTGGTCCTATGCATCTTCTTCACCACCACCGCCCCCGACAGTGACTTCTAGCAGCGAGGGTGAGATTTCAGCCGGCGCTGGTGTCGCCTCGAAGCGGATGAGAGAATA
CGGCGTCGATCTCGATTCCGATGACGAAATCGAGTCGTGTTCTGCACCACAGAGTACAAGGCCATTTTTCAATGACGAAGCAACTTCGTCAAGTTCCCTTAGGCCACTGA
AGCAAGCAAGAGTTGCAGGACCGATCCAATCAACCACATCCACTCCAGATGATGAAGCTTGTAAAGCCGAGTTAAAATCCACGGCTGTCGTTAGATCTATCCAGAGGACT
CCAGAATCGTCTTCCCACAGACATTAACGATGCTTCCAAAATGATCTTTGGGATATGCAAAATGAGCAGAGATCAGAATCGTTGATTCTTCACTAACCACACAAATGGAG
GTAGCTAGGGTTCTTGATTATTTTTCTTTTTTTCCTTTTGGGGTTTAATTTTTCTCACTAATTGTCTGTCATGATCAATTAATTCAAGGATTATACCTATTATCTCAACC
GTGTAAAACCTAGAATTTCCCCCCTCTATTTTCCATCAGATCATCTTGTCATCATTTGTGAAGCCTGTCATGTGTAGCCAGATATTAATTACATTCTATTAACAGATTTC
TCTCTACACTTTTGTGAGTGTTTTCTTGATGCAATATCTCAGTAAATATTTGTTAGTTGGTTTAAAGTGAGAGGTTCTCGCATTTTCTAGTTATTGTGTTTATGTGGGTC
TCCCATGACCAGAAGAGATGTATTCATATATAATATATAAGTTTAAACCCATATCCCCATATCTCTTTTGGGAGCATTTTTAGGTCCAGGAGGCCGCTTTTTGGGATTTT
TGCATATTGAAGATGATGCCCAATACCGAACTGAAAGGTAATCGCAATCAATCATATATATCTTGATATTATTTAATGGCCCTGAATTTCATGTTGGTGCTGTTTGTGAT
TAGAATAGTAAGATCATGGCCGACCGTGCGTTTGATGGAATCTTCATTTCTATATTTAACTCCCAGCTACATGCATATATACATGTATACAACTGAGGAAGTATTTGTAT
AGATGGTCTGTGTTTATTCTTCCAATCTTGGCTAGGGTTTGATGAAGAAATGATGTTTTGAGTTGCCAATTGTT
Protein sequenceShow/hide protein sequence
MYASRRLLGPPLVANLHPRSVCEGCVEVHDGKCEQDRRRDNEVEVDDGDDFVDGEGSIVMREVIVRKTMMGKMMTMRKKMMRTEKNQVVPWSYASSSPPPPPTVTSSSEG
EISAGAGVASKRMREYGVDLDSDDEIESCSAPQSTRPFFNDEATSSSSLRPLKQARVAGPIQSTTSTPDDEACKAELKSTAVVRSIQRTPESSSHRH