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IVF0004541 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0004541
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGag/pol protein
Genome locationchr04:11926736..11926894
RNA-Seq ExpressionIVF0004541
SyntenyIVF0004541
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035756.1 gag/pol protein [Cucumis melo var. makuwa]1.15e-1381.25Show/hide
Query:  MGKGKEVEANITTIEKEFMRGSSSKTKVGNSQMKKKGKGKIPKNNKGK
        MGKGKEVEANI TIEKE + GSSSKT+VG SQ+KKKGKGK PKN+KGK
Subjt:  MGKGKEVEANITTIEKEFMRGSSSKTKVGNSQMKKKGKGKIPKNNKGK
KAA0041250.1 gag/pol protein [Cucumis melo var. makuwa]2.51e-1680.77Show/hide
Query:  MGKGKEVEANITTIEKEFMRGSSSKTKVGNSQMKKKGKGKIPKNNKGKSCKR
        MGKGKEVEAN+ T EKEFMRG SSKTKVG SQMKKKGKGK PKN+KGK   R
Subjt:  MGKGKEVEANITTIEKEFMRGSSSKTKVGNSQMKKKGKGKIPKNNKGKSCKR
TYK16050.1 gag/pol protein [Cucumis melo var. makuwa]2.51e-1680.77Show/hide
Query:  MGKGKEVEANITTIEKEFMRGSSSKTKVGNSQMKKKGKGKIPKNNKGKSCKR
        MGKGKEVEAN+ T EKEFMRG SSKTKVG SQMKKKGKGK PKN+KGK   R
Subjt:  MGKGKEVEANITTIEKEFMRGSSSKTKVGNSQMKKKGKGKIPKNNKGKSCKR
TYK29862.1 gag/pol protein [Cucumis melo var. makuwa]6.43e-1379.17Show/hide
Query:  MGKGKEVEANITTIEKEFMRGSSSKTKVGNSQMKKKGKGKIPKNNKGK
        MGKGKEVEANI T EKE + GSSSKT+VG SQ+KKKGKGK PKN+KGK
Subjt:  MGKGKEVEANITTIEKEFMRGSSSKTKVGNSQMKKKGKGKIPKNNKGK
TYK30527.1 gag/pol protein [Cucumis melo var. makuwa]7.33e-1483.33Show/hide
Query:  MGKGKEVEANITTIEKEFMRGSSSKTKVGNSQMKKKGKGKIPKNNKGK
        MGK KEVEAN+ TIEKEFM GS SKTKVG SQMKKKGKGK PKN+KGK
Subjt:  MGKGKEVEANITTIEKEFMRGSSSKTKVGNSQMKKKGKGKIPKNNKGK
TrEMBL top hitse value%identityAlignment
A0A5A7T0L9 Gag/pol protein1.1e-0981.25Show/hide
Query:  MGKGKEVEANITTIEKEFMRGSSSKTKVGNSQMKKKGKGKIPKNNKGK
        MGKGKEVEANI TIEKE + GSSSKT+VG SQ+KKKGKGK PKN+KGK
Subjt:  MGKGKEVEANITTIEKEFMRGSSSKTKVGNSQMKKKGKGKIPKNNKGK
A0A5A7TD75 Gag/pol protein5.7e-1180.77Show/hide
Query:  MGKGKEVEANITTIEKEFMRGSSSKTKVGNSQMKKKGKGKIPKNNKGKSCKR
        MGKGKEVEAN+ T EKEFMRG SSKTKVG SQMKKKGKGK PKN+KGK   R
Subjt:  MGKGKEVEANITTIEKEFMRGSSSKTKVGNSQMKKKGKGKIPKNNKGKSCKR
A0A5D3CXH7 Gag/pol protein5.7e-1180.77Show/hide
Query:  MGKGKEVEANITTIEKEFMRGSSSKTKVGNSQMKKKGKGKIPKNNKGKSCKR
        MGKGKEVEAN+ T EKEFMRG SSKTKVG SQMKKKGKGK PKN+KGK   R
Subjt:  MGKGKEVEANITTIEKEFMRGSSSKTKVGNSQMKKKGKGKIPKNNKGKSCKR
A0A5D3E1U5 Gag/pol protein4.1e-0979.17Show/hide
Query:  MGKGKEVEANITTIEKEFMRGSSSKTKVGNSQMKKKGKGKIPKNNKGK
        MGKGKEVEANI T EKE + GSSSKT+VG SQ+KKKGKGK PKN+KGK
Subjt:  MGKGKEVEANITTIEKEFMRGSSSKTKVGNSQMKKKGKGKIPKNNKGK
A0A5D3E379 Gag/pol protein6.3e-1083.33Show/hide
Query:  MGKGKEVEANITTIEKEFMRGSSSKTKVGNSQMKKKGKGKIPKNNKGK
        MGK KEVEAN+ TIEKEFM GS SKTKVG SQMKKKGKGK PKN+KGK
Subjt:  MGKGKEVEANITTIEKEFMRGSSSKTKVGNSQMKKKGKGKIPKNNKGK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTAAGGGGAAGGAAGTGGAAGCAAATATTACTACCATAGAAAAAGAGTTTATGAGAGGATCGTCTTCTAAAACTAAAGTTGGGAATTCACAAATGAAGAAGAAGGG
AAAGGGGAAGATTCCCAAGAACAATAAGGGAAAAAGTTGCAAAAGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGTAAGGGGAAGGAAGTGGAAGCAAATATTACTACCATAGAAAAAGAGTTTATGAGAGGATCGTCTTCTAAAACTAAAGTTGGGAATTCACAAATGAAGAAGAAGGG
AAAGGGGAAGATTCCCAAGAACAATAAGGGAAAAAGTTGCAAAAGGTAA
Protein sequenceShow/hide protein sequence
MGKGKEVEANITTIEKEFMRGSSSKTKVGNSQMKKKGKGKIPKNNKGKSCKR