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IVF0004549 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0004549
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionLPS-induced tumor necrosis factor alpha factor
Genome locationchr07:11234069..11234245
RNA-Seq ExpressionIVF0004549
SyntenyIVF0004549
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054811.1 hypothetical protein E6C27_scaffold437G00990 [Cucumis melo var. makuwa]6.86e-2496.55Show/hide
Query:  MGDVSATLKMAIDCASAVAMGASVVMTVAPMLTPVVAPVMVATTVATSVTGVMEILGF
        MGDVSATLKMAIDCASAVAMGASVVMTVAPMLTPVVAPVM +TTVATSVTGVMEILGF
Subjt:  MGDVSATLKMAIDCASAVAMGASVVMTVAPMLTPVVAPVMVATTVATSVTGVMEILGF

KAA0068093.1 LPS-induced tumor necrosis factor alpha factor [Cucumis melo var. makuwa]8.84e-1084.44Show/hide
Query:  DCASAVAMGASVVMTVAPMLTPVVAPVMVATTVATSVTGVMEILG
        DCA  VA GASVVMTVAPMLTPVVAPVM A TVATS+TGVM ILG
Subjt:  DCASAVAMGASVVMTVAPMLTPVVAPVMVATTVATSVTGVMEILG

KGN65426.1 hypothetical protein Csa_019847 [Cucumis sativus]1.21e-1168.42Show/hide
Query:  MGDVSATLKMAIDCASAVAMGASVVMTVAPMLTPVVAPVMVATTVATSVTGVMEILG
        MGD    LK+A DCA AVA  ++VVMTVAP L PVVAPVMVA TV TSVTGV++I G
Subjt:  MGDVSATLKMAIDCASAVAMGASVVMTVAPMLTPVVAPVMVATTVATSVTGVMEILG

TYJ99647.1 hypothetical protein E5676_scaffold562G00240 [Cucumis melo var. makuwa]2.39e-2498.28Show/hide
Query:  MGDVSATLKMAIDCASAVAMGASVVMTVAPMLTPVVAPVMVATTVATSVTGVMEILGF
        MGDVSATLKMAIDCASAVAMGASVVMTVAPMLTPVVAPVM ATTVATSVTGVMEILGF
Subjt:  MGDVSATLKMAIDCASAVAMGASVVMTVAPMLTPVVAPVMVATTVATSVTGVMEILGF

TYK09492.1 hypothetical protein E5676_scaffold499G00920 [Cucumis melo var. makuwa]4.87e-1578.95Show/hide
Query:  MGDVSATLKMAIDCASAVAMGASVVMTVAPMLTPVVAPVMVATTVATSVTGVMEILG
        M DVSA LKMA DCA AVA GASVVMTVAPMLTPVVAPVMVA  V TSVT V+ +LG
Subjt:  MGDVSATLKMAIDCASAVAMGASVVMTVAPMLTPVVAPVMVATTVATSVTGVMEILG

TrEMBL top hitse value%identityAlignment
A0A0A0LZP7 Uncharacterized protein1.5e-0768.42Show/hide
Query:  MGDVSATLKMAIDCASAVAMGASVVMTVAPMLTPVVAPVMVATTVATSVTGVMEILG
        MGD    LK+A DCA AVA  ++VVMTVAP L PVVAPVMVA TV TSVTGV++I G
Subjt:  MGDVSATLKMAIDCASAVAMGASVVMTVAPMLTPVVAPVMVATTVATSVTGVMEILG

A0A5A7UMM6 Uncharacterized protein1.0e-1696.55Show/hide
Query:  MGDVSATLKMAIDCASAVAMGASVVMTVAPMLTPVVAPVMVATTVATSVTGVMEILGF
        MGDVSATLKMAIDCASAVAMGASVVMTVAPMLTPVVAPVM +TTVATSVTGVMEILGF
Subjt:  MGDVSATLKMAIDCASAVAMGASVVMTVAPMLTPVVAPVMVATTVATSVTGVMEILGF

A0A5D3BKI7 Uncharacterized protein4.5e-1798.28Show/hide
Query:  MGDVSATLKMAIDCASAVAMGASVVMTVAPMLTPVVAPVMVATTVATSVTGVMEILGF
        MGDVSATLKMAIDCASAVAMGASVVMTVAPMLTPVVAPVM ATTVATSVTGVMEILGF
Subjt:  MGDVSATLKMAIDCASAVAMGASVVMTVAPMLTPVVAPVMVATTVATSVTGVMEILGF

A0A5D3CE01 Uncharacterized protein5.4e-1078.95Show/hide
Query:  MGDVSATLKMAIDCASAVAMGASVVMTVAPMLTPVVAPVMVATTVATSVTGVMEILG
        M DVSA LKMA DCA AVA GASVVMTVAPMLTPVVAPVMVA  V TSVT V+ +LG
Subjt:  MGDVSATLKMAIDCASAVAMGASVVMTVAPMLTPVVAPVMVATTVATSVTGVMEILG

A0A5D3DRF6 LPS-induced tumor necrosis factor alpha factor4.2e-0784.44Show/hide
Query:  DCASAVAMGASVVMTVAPMLTPVVAPVMVATTVATSVTGVMEILG
        DCA  VA GASVVMTVAPMLTPVVAPVM A TVATS+TGVM ILG
Subjt:  DCASAVAMGASVVMTVAPMLTPVVAPVMVATTVATSVTGVMEILG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGATGTATCGGCAACTTTGAAGATGGCGATTGACTGTGCTTCGGCAGTGGCAATGGGTGCATCGGTGGTTATGACAGTGGCACCAATGTTGACCCCAGTTGTTGC
TCCTGTCATGGTTGCAACCACTGTTGCTACATCGGTCACTGGTGTTATGGAGATTTTAGGATTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAGATGTATCGGCAACTTTGAAGATGGCGATTGACTGTGCTTCGGCAGTGGCAATGGGTGCATCGGTGGTTATGACAGTGGCACCAATGTTGACCCCAGTTGTTGC
TCCTGTCATGGTTGCAACCACTGTTGCTACATCGGTCACTGGTGTTATGGAGATTTTAGGATTTTGA
Protein sequenceShow/hide protein sequence
MGDVSATLKMAIDCASAVAMGASVVMTVAPMLTPVVAPVMVATTVATSVTGVMEILGF