; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0004584 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0004584
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionPseudouridylate synthase 7-like protein isoform X1
Genome locationchr09:7228312..7229238
RNA-Seq ExpressionIVF0004584
SyntenyIVF0004584
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040615.1 uncharacterized protein E6C27_scaffold262G001920 [Cucumis melo var. makuwa]3.31e-215100Show/hide
Query:  MINYSKAKIKVSQNLCGFLPATVELRDENQGNIFFNFGDFEALEDPKVIEGATVELRDENQGNIFFNFGDFEALEDPKVNEGAMFLKDFANPIDLMRLNQ
        MINYSKAKIKVSQNLCGFLPATVELRDENQGNIFFNFGDFEALEDPKVIEGATVELRDENQGNIFFNFGDFEALEDPKVNEGAMFLKDFANPIDLMRLNQ
Subjt:  MINYSKAKIKVSQNLCGFLPATVELRDENQGNIFFNFGDFEALEDPKVIEGATVELRDENQGNIFFNFGDFEALEDPKVNEGAMFLKDFANPIDLMRLNQ

Query:  VLLDEEEDLNTSNSKWRFLLLHFQNLVSKGIPSRPCKKRMIVEGWVSLHLLLIGKIRLSEKKPKKRNKPAVNSAEEVKKLPSMMTEKSMAKSFISPNENS
        VLLDEEEDLNTSNSKWRFLLLHFQNLVSKGIPSRPCKKRMIVEGWVSLHLLLIGKIRLSEKKPKKRNKPAVNSAEEVKKLPSMMTEKSMAKSFISPNENS
Subjt:  VLLDEEEDLNTSNSKWRFLLLHFQNLVSKGIPSRPCKKRMIVEGWVSLHLLLIGKIRLSEKKPKKRNKPAVNSAEEVKKLPSMMTEKSMAKSFISPNENS

Query:  SLNKVDIHDLKFILSVSLKKAAQKASGPIPSNRISSSSKSSSPDHLALPLIALSETNKDYAVKGTSNPFSSHSNSSSAARIRGRLKVKRSSKTAKSSAFF
        SLNKVDIHDLKFILSVSLKKAAQKASGPIPSNRISSSSKSSSPDHLALPLIALSETNKDYAVKGTSNPFSSHSNSSSAARIRGRLKVKRSSKTAKSSAFF
Subjt:  SLNKVDIHDLKFILSVSLKKAAQKASGPIPSNRISSSSKSSSPDHLALPLIALSETNKDYAVKGTSNPFSSHSNSSSAARIRGRLKVKRSSKTAKSSAFF

Query:  HFFPKAFC
        HFFPKAFC
Subjt:  HFFPKAFC

KAA0063414.1 uncharacterized protein E6C27_scaffold508G00510 [Cucumis melo var. makuwa]1.08e-1643.51Show/hide
Query:  MINYSKAKIKVSQNLCGFLPATVELRDENQGNIFFNFGDFEALEDPKVIEGATVELRDENQGNIFFNFGDFEALEDPKVNEGAMFLKDFANPIDLMRLNQ
        +IN S+AKIKVSQNLCGFLPA VELRD  + NIF NFGD + LE PKVIE A                               +F+    N IDL+R+NQ
Subjt:  MINYSKAKIKVSQNLCGFLPATVELRDENQGNIFFNFGDFEALEDPKVIEGATVELRDENQGNIFFNFGDFEALEDPKVNEGAMFLKDFANPIDLMRLNQ

Query:  VLLDEE-EDLNTSNSKWRFLLLHFQNLVSKG
        VLLDE  E  +    +W FL   + N   +G
Subjt:  VLLDEE-EDLNTSNSKWRFLLLHFQNLVSKG

TYK28792.1 pseudouridylate synthase 7-like protein isoform X1 [Cucumis melo var. makuwa]3.68e-1237.61Show/hide
Query:  NYSKAKIKVSQNLCGFLPATVELRDENQGNIFFNFGDFEALEDPKVIEGATVELRDENQGNIFFNFGDFEALEDPKVNEGAMFLKDFANPIDLMRLNQVL
        N  +AKI++  NLCGF+PAT+E+ DEN+G  F N+GD E L                                 PKV +G + LKDF NPIDL+R+ QV+
Subjt:  NYSKAKIKVSQNLCGFLPATVELRDENQGNIFFNFGDFEALEDPKVIEGATVELRDENQGNIFFNFGDFEALEDPKVNEGAMFLKDFANPIDLMRLNQVL

Query:  LDEEEDLNTSNSKWRFL
         DEE +    + +W F+
Subjt:  LDEEEDLNTSNSKWRFL

TYK30074.1 uncharacterized protein E5676_scaffold216G00470 [Cucumis melo var. makuwa]1.50e-2164.36Show/hide
Query:  SEKKPKKRNKPAVNSAEEVKKLPSMMTEKSMAKSFISPNENSSLNKVDIHDLKFILSVSLKKAAQKASGPIPSNRISSSSKSSSP---DHLALPLIALSE
        S+K  K R+K  VNS EEV+ LPS MTEK MAKSF  PNENSSLNKV I DL+ I  VSLKK AQKASGPIPSN    SSK  SP   D LA P +A+S+
Subjt:  SEKKPKKRNKPAVNSAEEVKKLPSMMTEKSMAKSFISPNENSSLNKVDIHDLKFILSVSLKKAAQKASGPIPSNRISSSSKSSSP---DHLALPLIALSE

Query:  T
        T
Subjt:  T

XP_016903436.1 PREDICTED: uncharacterized protein LOC107992196 [Cucumis melo]2.24e-21399.35Show/hide
Query:  MINYSKAKIKVSQNLCGFLPATVELRDENQGNIFFNFGDFEALEDPKVIEGATVELRDENQGNIFFNFGDFEALEDPKVNEGAMFLKDFANPIDLMRLNQ
        MINYSKAKIKVSQNLCGFLPATVELRDENQGNIFFNFGDFEALEDPKVIEGA VELRDENQGNIFFNFGDFEALEDPKVNEGAMFLKDFANPIDLMRLNQ
Subjt:  MINYSKAKIKVSQNLCGFLPATVELRDENQGNIFFNFGDFEALEDPKVIEGATVELRDENQGNIFFNFGDFEALEDPKVNEGAMFLKDFANPIDLMRLNQ

Query:  VLLDEEEDLNTSNSKWRFLLLHFQNLVSKGIPSRPCKKRMIVEGWVSLHLLLIGKIRLSEKKPKKRNKPAVNSAEEVKKLPSMMTEKSMAKSFISPNENS
        VLLDEEEDLNTSNSKWRFLLLHFQNLVSKGIPSRPCKKRMIVEGWVSLHLLLIGKIRLSEKKPKKRNKPAVNSAEEVKKLPSMMTEKSMAKSFISPNENS
Subjt:  VLLDEEEDLNTSNSKWRFLLLHFQNLVSKGIPSRPCKKRMIVEGWVSLHLLLIGKIRLSEKKPKKRNKPAVNSAEEVKKLPSMMTEKSMAKSFISPNENS

Query:  SLNKVDIHDLKFILSVSLKKAAQKASGPIPSNRISSSSKSSSPDHLALPLIALSETNKDYAVKGTSNPFSSHSNSSSAARIRGRLKVKRSSKTAKSSAFF
        SLNKVDIHDLKFILSVSLKKAAQKASGPIPSNRISSSS SSSPDHLALPLIALSETNKDYAVKGTSNPFSSHSNSSSAARIRGRLKVKRSSKTAKSSAFF
Subjt:  SLNKVDIHDLKFILSVSLKKAAQKASGPIPSNRISSSSKSSSPDHLALPLIALSETNKDYAVKGTSNPFSSHSNSSSAARIRGRLKVKRSSKTAKSSAFF

Query:  HFFPKAFC
        HFFPKAFC
Subjt:  HFFPKAFC

TrEMBL top hitse value%identityAlignment
A0A0A0KNJ6 Uncharacterized protein1.1e-3275.21Show/hide
Query:  MMTEKSMAKSFISPNENSSLNKVDIHDLKFILSVSLKKAAQKASGPIPSNRISSSSKSSSPDHLALPLIALSETNKDYAVKGTSNPFSSHSNSSSA----
        MMTEKS  KSFISPNENSSLNKVD+ DLK I  VSLK  AQK SGPIPSN+ISSSS+S SP+ LALP +ALSETNKD A+KGTSN FSSHSNSSSA    
Subjt:  MMTEKSMAKSFISPNENSSLNKVDIHDLKFILSVSLKKAAQKASGPIPSNRISSSSKSSSPDHLALPLIALSETNKDYAVKGTSNPFSSHSNSSSA----

Query:  ARIRGRLKVKRSSKTAK
        ARI+GR +VKRSSK  K
Subjt:  ARIRGRLKVKRSSKTAK

A0A1S4E5E1 uncharacterized protein LOC1079921961.1e-16599.35Show/hide
Query:  MINYSKAKIKVSQNLCGFLPATVELRDENQGNIFFNFGDFEALEDPKVIEGATVELRDENQGNIFFNFGDFEALEDPKVNEGAMFLKDFANPIDLMRLNQ
        MINYSKAKIKVSQNLCGFLPATVELRDENQGNIFFNFGDFEALEDPKVIEGA VELRDENQGNIFFNFGDFEALEDPKVNEGAMFLKDFANPIDLMRLNQ
Subjt:  MINYSKAKIKVSQNLCGFLPATVELRDENQGNIFFNFGDFEALEDPKVIEGATVELRDENQGNIFFNFGDFEALEDPKVNEGAMFLKDFANPIDLMRLNQ

Query:  VLLDEEEDLNTSNSKWRFLLLHFQNLVSKGIPSRPCKKRMIVEGWVSLHLLLIGKIRLSEKKPKKRNKPAVNSAEEVKKLPSMMTEKSMAKSFISPNENS
        VLLDEEEDLNTSNSKWRFLLLHFQNLVSKGIPSRPCKKRMIVEGWVSLHLLLIGKIRLSEKKPKKRNKPAVNSAEEVKKLPSMMTEKSMAKSFISPNENS
Subjt:  VLLDEEEDLNTSNSKWRFLLLHFQNLVSKGIPSRPCKKRMIVEGWVSLHLLLIGKIRLSEKKPKKRNKPAVNSAEEVKKLPSMMTEKSMAKSFISPNENS

Query:  SLNKVDIHDLKFILSVSLKKAAQKASGPIPSNRISSSSKSSSPDHLALPLIALSETNKDYAVKGTSNPFSSHSNSSSAARIRGRLKVKRSSKTAKSSAFF
        SLNKVDIHDLKFILSVSLKKAAQKASGPIPSNRISSSS SSSPDHLALPLIALSETNKDYAVKGTSNPFSSHSNSSSAARIRGRLKVKRSSKTAKSSAFF
Subjt:  SLNKVDIHDLKFILSVSLKKAAQKASGPIPSNRISSSSKSSSPDHLALPLIALSETNKDYAVKGTSNPFSSHSNSSSAARIRGRLKVKRSSKTAKSSAFF

Query:  HFFPKAFC
        HFFPKAFC
Subjt:  HFFPKAFC

A0A5A7V878 DUF4283 domain-containing protein1.0e-1443.51Show/hide
Query:  MINYSKAKIKVSQNLCGFLPATVELRDENQGNIFFNFGDFEALEDPKVIEGATVELRDENQGNIFFNFGDFEALEDPKVNEGAMFLKDFANPIDLMRLNQ
        +IN S+AKIKVSQNLCGFLPA VELRD  + NIF NFGD + LE PKVI                               E A+F+    N IDL+R+NQ
Subjt:  MINYSKAKIKVSQNLCGFLPATVELRDENQGNIFFNFGDFEALEDPKVIEGATVELRDENQGNIFFNFGDFEALEDPKVNEGAMFLKDFANPIDLMRLNQ

Query:  VLLDE-EEDLNTSNSKWRFLLLHFQNLVSKG
        VLLDE  E  +    +W FL   + N   +G
Subjt:  VLLDE-EEDLNTSNSKWRFLLLHFQNLVSKG

A0A5D3C5I3 Uncharacterized protein4.3e-167100Show/hide
Query:  MINYSKAKIKVSQNLCGFLPATVELRDENQGNIFFNFGDFEALEDPKVIEGATVELRDENQGNIFFNFGDFEALEDPKVNEGAMFLKDFANPIDLMRLNQ
        MINYSKAKIKVSQNLCGFLPATVELRDENQGNIFFNFGDFEALEDPKVIEGATVELRDENQGNIFFNFGDFEALEDPKVNEGAMFLKDFANPIDLMRLNQ
Subjt:  MINYSKAKIKVSQNLCGFLPATVELRDENQGNIFFNFGDFEALEDPKVIEGATVELRDENQGNIFFNFGDFEALEDPKVNEGAMFLKDFANPIDLMRLNQ

Query:  VLLDEEEDLNTSNSKWRFLLLHFQNLVSKGIPSRPCKKRMIVEGWVSLHLLLIGKIRLSEKKPKKRNKPAVNSAEEVKKLPSMMTEKSMAKSFISPNENS
        VLLDEEEDLNTSNSKWRFLLLHFQNLVSKGIPSRPCKKRMIVEGWVSLHLLLIGKIRLSEKKPKKRNKPAVNSAEEVKKLPSMMTEKSMAKSFISPNENS
Subjt:  VLLDEEEDLNTSNSKWRFLLLHFQNLVSKGIPSRPCKKRMIVEGWVSLHLLLIGKIRLSEKKPKKRNKPAVNSAEEVKKLPSMMTEKSMAKSFISPNENS

Query:  SLNKVDIHDLKFILSVSLKKAAQKASGPIPSNRISSSSKSSSPDHLALPLIALSETNKDYAVKGTSNPFSSHSNSSSAARIRGRLKVKRSSKTAKSSAFF
        SLNKVDIHDLKFILSVSLKKAAQKASGPIPSNRISSSSKSSSPDHLALPLIALSETNKDYAVKGTSNPFSSHSNSSSAARIRGRLKVKRSSKTAKSSAFF
Subjt:  SLNKVDIHDLKFILSVSLKKAAQKASGPIPSNRISSSSKSSSPDHLALPLIALSETNKDYAVKGTSNPFSSHSNSSSAARIRGRLKVKRSSKTAKSSAFF

Query:  HFFPKAFC
        HFFPKAFC
Subjt:  HFFPKAFC

A0A5D3E2G1 Uncharacterized protein2.0e-1864.36Show/hide
Query:  SEKKPKKRNKPAVNSAEEVKKLPSMMTEKSMAKSFISPNENSSLNKVDIHDLKFILSVSLKKAAQKASGPIPSNRISSSSKSSSP---DHLALPLIALSE
        S+K  K R+K  VNS EEV+ LPS MTEK MAKSF  PNENSSLNKV I DL+ I  VSLKK AQKASGPIPSN    SSK  SP   D LA P +A+S+
Subjt:  SEKKPKKRNKPAVNSAEEVKKLPSMMTEKSMAKSFISPNENSSLNKVDIHDLKFILSVSLKKAAQKASGPIPSNRISSSSKSSSP---DHLALPLIALSE

Query:  T
        T
Subjt:  T

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTAACTATTCGAAGGCTAAAATCAAGGTTAGTCAAAACCTGTGTGGTTTCTTGCCCGCAACGGTTGAGTTAAGAGATGAAAATCAGGGCAATATTTTTTTCAATTT
TGGGGACTTCGAAGCACTGGAAGACCCAAAAGTGATTGAAGGAGCAACGGTCGAGTTAAGAGATGAAAATCAGGGCAATATTTTTTTCAATTTTGGGGACTTCGAAGCAC
TGGAAGACCCGAAAGTGAATGAAGGAGCAATGTTCTTAAAAGACTTTGCTAATCCGATTGATTTAATGAGACTAAATCAAGTTCTTTTAGATGAAGAGGAAGATTTGAAT
ACTTCGAATTCCAAATGGCGCTTCCTTCTACTTCACTTTCAAAACCTGGTTTCTAAAGGAATCCCTTCGAGGCCTTGCAAGAAAAGGATGATCGTGGAGGGTTGGGTGAG
TCTTCATCTTCTTCTCATCGGAAAAATCAGATTGTCGGAAAAAAAACCAAAGAAGAGGAACAAACCAGCCGTGAATTCCGCTGAGGAAGTTAAAAAGTTGCCTTCAATGA
TGACAGAGAAAAGTATGGCCAAGTCCTTTATTTCGCCCAATGAGAATTCAAGTCTTAATAAGGTGGATATTCACGATTTAAAGTTTATTTTAAGTGTTTCTCTCAAGAAG
GCAGCCCAAAAGGCAAGTGGGCCCATCCCATCCAACCGAATCTCGTCCAGCAGCAAGTCATCGTCCCCGGATCATTTAGCACTTCCTTTAATTGCATTATCAGAGACCAA
CAAAGACTATGCCGTCAAGGGAACAAGTAATCCTTTCTCTTCTCATTCAAATTCTTCTTCAGCAGCCAGAATCAGAGGTAGATTGAAGGTCAAACGAAGTTCCAAAACAG
CAAAAAGTAGTGCATTCTTTCATTTCTTTCCCAAAGCATTTTGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGATTAACTATTCGAAGGCTAAAATCAAGGTTAGTCAAAACCTGTGTGGTTTCTTGCCCGCAACGGTTGAGTTAAGAGATGAAAATCAGGGCAATATTTTTTTCAATTT
TGGGGACTTCGAAGCACTGGAAGACCCAAAAGTGATTGAAGGAGCAACGGTCGAGTTAAGAGATGAAAATCAGGGCAATATTTTTTTCAATTTTGGGGACTTCGAAGCAC
TGGAAGACCCGAAAGTGAATGAAGGAGCAATGTTCTTAAAAGACTTTGCTAATCCGATTGATTTAATGAGACTAAATCAAGTTCTTTTAGATGAAGAGGAAGATTTGAAT
ACTTCGAATTCCAAATGGCGCTTCCTTCTACTTCACTTTCAAAACCTGGTTTCTAAAGGAATCCCTTCGAGGCCTTGCAAGAAAAGGATGATCGTGGAGGGTTGGGTGAG
TCTTCATCTTCTTCTCATCGGAAAAATCAGATTGTCGGAAAAAAAACCAAAGAAGAGGAACAAACCAGCCGTGAATTCCGCTGAGGAAGTTAAAAAGTTGCCTTCAATGA
TGACAGAGAAAAGTATGGCCAAGTCCTTTATTTCGCCCAATGAGAATTCAAGTCTTAATAAGGTGGATATTCACGATTTAAAGTTTATTTTAAGTGTTTCTCTCAAGAAG
GCAGCCCAAAAGGCAAGTGGGCCCATCCCATCCAACCGAATCTCGTCCAGCAGCAAGTCATCGTCCCCGGATCATTTAGCACTTCCTTTAATTGCATTATCAGAGACCAA
CAAAGACTATGCCGTCAAGGGAACAAGTAATCCTTTCTCTTCTCATTCAAATTCTTCTTCAGCAGCCAGAATCAGAGGTAGATTGAAGGTCAAACGAAGTTCCAAAACAG
CAAAAAGTAGTGCATTCTTTCATTTCTTTCCCAAAGCATTTTGTTAG
Protein sequenceShow/hide protein sequence
MINYSKAKIKVSQNLCGFLPATVELRDENQGNIFFNFGDFEALEDPKVIEGATVELRDENQGNIFFNFGDFEALEDPKVNEGAMFLKDFANPIDLMRLNQVLLDEEEDLN
TSNSKWRFLLLHFQNLVSKGIPSRPCKKRMIVEGWVSLHLLLIGKIRLSEKKPKKRNKPAVNSAEEVKKLPSMMTEKSMAKSFISPNENSSLNKVDIHDLKFILSVSLKK
AAQKASGPIPSNRISSSSKSSSPDHLALPLIALSETNKDYAVKGTSNPFSSHSNSSSAARIRGRLKVKRSSKTAKSSAFFHFFPKAFC