CuGenDBv2

Gene ID	IVF0004589
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	cyclic phosphodiesterase-like
Genome location	chr08:1306226..1308260
RNA-Seq Expression	IVF0004589
Synteny	IVF0004589
Gene Ontology terms	GO:0009187 - cyclic nucleotide metabolic process (biological process) GO:0004113 - 2',3'-cyclic-nucleotide 3'-phosphodiesterase activity (molecular function)
InterPro domains	IPR009097 - Cyclic phosphodiesterase IPR012386 - 2',3'-cyclic-nucleotide 3'-phosphodiesterase

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0052590.1 cyclic phosphodiesterase-like [Cucumis melo var. makuwa]

1.06e-116

90.62

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Query:  MVNPESASIQSSEEETNVYSVWALPPEDVSARIENLMNSLRSEFGGPQFEPHITVVGAIRLTAEDALNKFLTACQGIKAYQATVDHVSTGTFFYQCVFLL
        MVNPESASIQSSEEETNVYSVWALPPEDVSARIENLMNSLRSEFGGPQFEPHITVVGAIRLTAEDALNKFLTACQGIKAYQATVDHVSTGTFFYQCVFLL
Subjt:  MVNPESASIQSSEEETNVYSVWALPPEDVSARIENLMNSLRSEFGGPQFEPHITVVGAIRLTAEDALNKFLTACQGIKAYQATVDHVSTGTFFYQCVFLL

Query:  IHPTTEVVETSSHFCKHFGFKNSTPYMPHMSLLYAHISDEKKKQAKEIADKLDEAVNGLKFPITRLALWKTDTSDETLKSWEKIVEHDLSSS
        IHPTTEV+ +               YMPHMSLLYAHISDEKKKQAKEIADKLDEAVNGLKFPITRLALWKTDTSDETLKSWEKIVEHDLSSS
Subjt:  IHPTTEVVETSSHFCKHFGFKNSTPYMPHMSLLYAHISDEKKKQAKEIADKLDEAVNGLKFPITRLALWKTDTSDETLKSWEKIVEHDLSSS

XP_004134643.1 cyclic phosphodiesterase [Cucumis sativus]

4.16e-124

91.67

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Query:  MVNPESASIQSSEEETNVYSVWALPPEDVSARIENLMNSLRSEFGGPQFEPHITVVGAIRLTAEDALNKFLTACQGIKAYQATVDHVSTGTFFYQCVFLL
        M+NPESASIQS EEET+VYSVWALPPEDVSARIENLM SLRSEFGGP FEPHITVVGAIRLTAEDAL KF TACQGIKAYQATVDHV+TGTFFYQCVFLL
Subjt:  MVNPESASIQSSEEETNVYSVWALPPEDVSARIENLMNSLRSEFGGPQFEPHITVVGAIRLTAEDALNKFLTACQGIKAYQATVDHVSTGTFFYQCVFLL

Query:  IHPTTEVVETSSHFCKHFGFKNSTPYMPHMSLLYAHISDEKKKQAKEIADKLDEAVNGLKFPITRLALWKTDTSDETLKSWEKIVEHDLSSS
        IHPTTEVVETSSHFCKHF FK+STPYMPHMSLLY+HISDEK+KQAKEIADKLDEAVNGL+FPITRLAL KTDT+DETLKSW+KIVEHDLSSS
Subjt:  IHPTTEVVETSSHFCKHFGFKNSTPYMPHMSLLYAHISDEKKKQAKEIADKLDEAVNGLKFPITRLALWKTDTSDETLKSWEKIVEHDLSSS

XP_008439703.1 PREDICTED: cyclic phosphodiesterase-like [Cucumis melo]

2.63e-136

100

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Query:  MVNPESASIQSSEEETNVYSVWALPPEDVSARIENLMNSLRSEFGGPQFEPHITVVGAIRLTAEDALNKFLTACQGIKAYQATVDHVSTGTFFYQCVFLL
        MVNPESASIQSSEEETNVYSVWALPPEDVSARIENLMNSLRSEFGGPQFEPHITVVGAIRLTAEDALNKFLTACQGIKAYQATVDHVSTGTFFYQCVFLL
Subjt:  MVNPESASIQSSEEETNVYSVWALPPEDVSARIENLMNSLRSEFGGPQFEPHITVVGAIRLTAEDALNKFLTACQGIKAYQATVDHVSTGTFFYQCVFLL

Query:  IHPTTEVVETSSHFCKHFGFKNSTPYMPHMSLLYAHISDEKKKQAKEIADKLDEAVNGLKFPITRLALWKTDTSDETLKSWEKIVEHDLSSS
        IHPTTEVVETSSHFCKHFGFKNSTPYMPHMSLLYAHISDEKKKQAKEIADKLDEAVNGLKFPITRLALWKTDTSDETLKSWEKIVEHDLSSS
Subjt:  IHPTTEVVETSSHFCKHFGFKNSTPYMPHMSLLYAHISDEKKKQAKEIADKLDEAVNGLKFPITRLALWKTDTSDETLKSWEKIVEHDLSSS

XP_023543945.1 cyclic phosphodiesterase-like isoform X2 [Cucurbita pepo subsp. pepo]

1.60e-112

83.33

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Query:  MVNPESASIQSSEEETNVYSVWALPPEDVSARIENLMNSLRSEFGGPQFEPHITVVGAIRLTAEDALNKFLTACQGIKAYQATVDHVSTGTFFYQCVFLL
        M NPES  IQ SE E NVYSVWALPPEDV+ARI  LMNSLRSEFGGPQFEPHITVVGAIRLT +DALNKF +AC+G+KAYQATVD VSTGTFFYQCVFLL
Subjt:  MVNPESASIQSSEEETNVYSVWALPPEDVSARIENLMNSLRSEFGGPQFEPHITVVGAIRLTAEDALNKFLTACQGIKAYQATVDHVSTGTFFYQCVFLL

Query:  IHPTTEVVETSSHFCKHFGFKNSTPYMPHMSLLYAHISDEKKKQAKEIADKLDEAVNGLKFPITRLALWKTDTSDETLKSWEKIVEHDLSSS
        IHPTT+VVETSSH C HFG+KNSTPYMPH+SLLYA+ISDE+KKQAKE+A+KLDEA+NGL FPITRLAL+KTDT DETLKSWEKI E DL SS
Subjt:  IHPTTEVVETSSHFCKHFGFKNSTPYMPHMSLLYAHISDEKKKQAKEIADKLDEAVNGLKFPITRLALWKTDTSDETLKSWEKIVEHDLSSS

XP_038882567.1 cyclic phosphodiesterase-like [Benincasa hispida]

4.46e-119

88.54

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Query:  MVNPESASIQSSEEETNVYSVWALPPEDVSARIENLMNSLRSEFGGPQFEPHITVVGAIRLTAEDALNKFLTACQGIKAYQATVDHVSTGTFFYQCVFLL
        M NPESASIQ SE E NVYSVWALPPEDV+ARI+NLMNSLRSEFGGPQFEPHITVVGAIRLT +DALNKF +ACQG+KAYQATVDHVSTGTFFYQCVFLL
Subjt:  MVNPESASIQSSEEETNVYSVWALPPEDVSARIENLMNSLRSEFGGPQFEPHITVVGAIRLTAEDALNKFLTACQGIKAYQATVDHVSTGTFFYQCVFLL

Query:  IHPTTEVVETSSHFCKHFGFKNSTPYMPHMSLLYAHISDEKKKQAKEIADKLDEAVNGLKFPITRLALWKTDTSDETLKSWEKIVEHDLSSS
        IH TTEVVETSSH C HFG+KNSTPYMPHMSLLYA+ISDEKKKQAK IADKLDEAVNGLKFPITRLAL+KTDT DETLKSWEKI EH+L SS
Subjt:  IHPTTEVVETSSHFCKHFGFKNSTPYMPHMSLLYAHISDEKKKQAKEIADKLDEAVNGLKFPITRLALWKTDTSDETLKSWEKIVEHDLSSS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KLS9 Uncharacterized protein

5.6e-96

91.67

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Query:  MVNPESASIQSSEEETNVYSVWALPPEDVSARIENLMNSLRSEFGGPQFEPHITVVGAIRLTAEDALNKFLTACQGIKAYQATVDHVSTGTFFYQCVFLL
        M+NPESASIQS EEET+VYSVWALPPEDVSARIENLM SLRSEFGGP FEPHITVVGAIRLTAEDAL KF TACQGIKAYQATVDHV+TGTFFYQCVFLL
Subjt:  MVNPESASIQSSEEETNVYSVWALPPEDVSARIENLMNSLRSEFGGPQFEPHITVVGAIRLTAEDALNKFLTACQGIKAYQATVDHVSTGTFFYQCVFLL

Query:  IHPTTEVVETSSHFCKHFGFKNSTPYMPHMSLLYAHISDEKKKQAKEIADKLDEAVNGLKFPITRLALWKTDTSDETLKSWEKIVEHDLSSS
        IHPTTEVVETSSHFCKHF FK+STPYMPHMSLLY+HISDEK+KQAKEIADKLDEAVNGL+FPITRLAL KTDT+DETLKSW+KIVEHDLSSS
Subjt:  IHPTTEVVETSSHFCKHFGFKNSTPYMPHMSLLYAHISDEKKKQAKEIADKLDEAVNGLKFPITRLALWKTDTSDETLKSWEKIVEHDLSSS

A0A1S3AYZ1 cyclic phosphodiesterase-like

2.9e-105

100

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Query:  MVNPESASIQSSEEETNVYSVWALPPEDVSARIENLMNSLRSEFGGPQFEPHITVVGAIRLTAEDALNKFLTACQGIKAYQATVDHVSTGTFFYQCVFLL
        MVNPESASIQSSEEETNVYSVWALPPEDVSARIENLMNSLRSEFGGPQFEPHITVVGAIRLTAEDALNKFLTACQGIKAYQATVDHVSTGTFFYQCVFLL
Subjt:  MVNPESASIQSSEEETNVYSVWALPPEDVSARIENLMNSLRSEFGGPQFEPHITVVGAIRLTAEDALNKFLTACQGIKAYQATVDHVSTGTFFYQCVFLL

Query:  IHPTTEVVETSSHFCKHFGFKNSTPYMPHMSLLYAHISDEKKKQAKEIADKLDEAVNGLKFPITRLALWKTDTSDETLKSWEKIVEHDLSSS
        IHPTTEVVETSSHFCKHFGFKNSTPYMPHMSLLYAHISDEKKKQAKEIADKLDEAVNGLKFPITRLALWKTDTSDETLKSWEKIVEHDLSSS
Subjt:  IHPTTEVVETSSHFCKHFGFKNSTPYMPHMSLLYAHISDEKKKQAKEIADKLDEAVNGLKFPITRLALWKTDTSDETLKSWEKIVEHDLSSS

A0A5D3CNS3 Cyclic phosphodiesterase-like

3.5e-90

90.62

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Query:  MVNPESASIQSSEEETNVYSVWALPPEDVSARIENLMNSLRSEFGGPQFEPHITVVGAIRLTAEDALNKFLTACQGIKAYQATVDHVSTGTFFYQCVFLL
        MVNPESASIQSSEEETNVYSVWALPPEDVSARIENLMNSLRSEFGGPQFEPHITVVGAIRLTAEDALNKFLTACQGIKAYQATVDHVSTGTFFYQCVFLL
Subjt:  MVNPESASIQSSEEETNVYSVWALPPEDVSARIENLMNSLRSEFGGPQFEPHITVVGAIRLTAEDALNKFLTACQGIKAYQATVDHVSTGTFFYQCVFLL

Query:  IHPTTEVVETSSHFCKHFGFKNSTPYMPHMSLLYAHISDEKKKQAKEIADKLDEAVNGLKFPITRLALWKTDTSDETLKSWEKIVEHDLSSS
        IHPTTEV+ +               YMPHMSLLYAHISDEKKKQAKEIADKLDEAVNGLKFPITRLALWKTDTSDETLKSWEKIVEHDLSSS
Subjt:  IHPTTEVVETSSHFCKHFGFKNSTPYMPHMSLLYAHISDEKKKQAKEIADKLDEAVNGLKFPITRLALWKTDTSDETLKSWEKIVEHDLSSS

A0A6J1EGC1 cyclic phosphodiesterase-like

4.4e-85

82.81

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Query:  MVNPESASIQSSEEETNVYSVWALPPEDVSARIENLMNSLRSEFGGPQFEPHITVVGAIRLTAEDALNKFLTACQGIKAYQATVDHVSTGTFFYQCVFLL
        M NPES  IQ SE E NVYSVWALPPEDV ARI  LMNSLRSEFGGPQFEPHITVVGAIRLT +DALNKF +AC+G+KAYQATVD VSTGTFFYQCVFLL
Subjt:  MVNPESASIQSSEEETNVYSVWALPPEDVSARIENLMNSLRSEFGGPQFEPHITVVGAIRLTAEDALNKFLTACQGIKAYQATVDHVSTGTFFYQCVFLL

Query:  IHPTTEVVETSSHFCKHFGFKNSTPYMPHMSLLYAHISDEKKKQAKEIADKLDEAVNGLKFPITRLALWKTDTSDETLKSWEKIVEHDLSSS
        IHPTT+VVETSSH C HFG+KN TPYMPH+SLLYA+ISDE+KKQAKE+A+KLDEA+NGL FPITRLAL+KTDT DETLKSWEKI E DL SS
Subjt:  IHPTTEVVETSSHFCKHFGFKNSTPYMPHMSLLYAHISDEKKKQAKEIADKLDEAVNGLKFPITRLALWKTDTSDETLKSWEKIVEHDLSSS

A0A6J1INY2 cyclic phosphodiesterase-like

3.6e-87

82.81

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Query:  MVNPESASIQSSEEETNVYSVWALPPEDVSARIENLMNSLRSEFGGPQFEPHITVVGAIRLTAEDALNKFLTACQGIKAYQATVDHVSTGTFFYQCVFLL
        M NPES +IQ SE E NVYSVWALPPEDV+ARI  LMNSLRSEFGGPQFEPHITVVGAIRLT +DALNKF +AC+G+KAYQATVD VSTGTFFYQCVFLL
Subjt:  MVNPESASIQSSEEETNVYSVWALPPEDVSARIENLMNSLRSEFGGPQFEPHITVVGAIRLTAEDALNKFLTACQGIKAYQATVDHVSTGTFFYQCVFLL

Query:  IHPTTEVVETSSHFCKHFGFKNSTPYMPHMSLLYAHISDEKKKQAKEIADKLDEAVNGLKFPITRLALWKTDTSDETLKSWEKIVEHDLSSS
        IHPTT+VVETSSH C HFG+KNSTPYMPH+SLLYA+ISDE+KKQAKE+A+KLDEA+NGL FP+TRLAL+KTDT DETLKSWEKI E DL SS
Subjt:  IHPTTEVVETSSHFCKHFGFKNSTPYMPHMSLLYAHISDEKKKQAKEIADKLDEAVNGLKFPITRLALWKTDTSDETLKSWEKIVEHDLSSS

SwissProt top hits

e value

%identity

Alignment

O04147 Cyclic phosphodiesterase

1.5e-50

53.93

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Query:  EEETNVYSVWALPPEDVSARIENLMNSLRSEFGGPQFEPHITVVGAIRLTAEDALNKFLTACQGIKAYQATVDHVSTGTFFYQCVFLLIHPTTEVVETSS
        E + +VYSVWALP E+   R + LM +LRSEF GP+F PH+TV  +  LTA++A   F +AC G+KAY ATVD VSTGTFF+QCVFLL+  T EV+E   
Subjt:  EEETNVYSVWALPPEDVSARIENLMNSLRSEFGGPQFEPHITVVGAIRLTAEDALNKFLTACQGIKAYQATVDHVSTGTFFYQCVFLLIHPTTEVVETSS

Query:  HFCKHFGFKNSTPYMPHMSLLYAHISDEKKKQAKEIADKLDEAVNGLKFPITRLALWKTDTSDETLKSWEKIVEHDLS
        H   HF    +TPYMPH+SLLYA +++E+KK A+E A  LD +++GL F + RLAL KTDT D+TL++WE +   +L+
Subjt:  HFCKHFGFKNSTPYMPHMSLLYAHISDEKKKQAKEIADKLDEAVNGLKFPITRLALWKTDTSDETLKSWEKIVEHDLS

Arabidopsis top hits

e value

%identity

Alignment

AT4G18930.1 RNA ligase/cyclic nucleotide phosphodiesterase family protein

1.1e-51

53.93

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Query:  EEETNVYSVWALPPEDVSARIENLMNSLRSEFGGPQFEPHITVVGAIRLTAEDALNKFLTACQGIKAYQATVDHVSTGTFFYQCVFLLIHPTTEVVETSS
        E + +VYSVWALP E+   R + LM +LRSEF GP+F PH+TV  +  LTA++A   F +AC G+KAY ATVD VSTGTFF+QCVFLL+  T EV+E   
Subjt:  EEETNVYSVWALPPEDVSARIENLMNSLRSEFGGPQFEPHITVVGAIRLTAEDALNKFLTACQGIKAYQATVDHVSTGTFFYQCVFLLIHPTTEVVETSS

Query:  HFCKHFGFKNSTPYMPHMSLLYAHISDEKKKQAKEIADKLDEAVNGLKFPITRLALWKTDTSDETLKSWEKIVEHDLS
        H   HF    +TPYMPH+SLLYA +++E+KK A+E A  LD +++GL F + RLAL KTDT D+TL++WE +   +L+
Subjt:  HFCKHFGFKNSTPYMPHMSLLYAHISDEKKKQAKEIADKLDEAVNGLKFPITRLALWKTDTSDETLKSWEKIVEHDLS

AT4G18940.1 RNA ligase/cyclic nucleotide phosphodiesterase family protein

1.9e-43

45.65

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Query:  QSSEEETNVYSVWALPPEDVSARIENLMNSLRSEFGGPQFEPHITVVGAI--RLTAEDALNKFLTACQGIKAYQATVDHVSTGTFFYQCVFLLIHPTTEV
        +  EEE  +Y++WA+P +DV  R++ LM  LRSEFGGP F+PH+T+VG    +LTA +A   F +AC+G K Y ATVD VS GT ++QC+++ +  T EV
Subjt:  QSSEEETNVYSVWALPPEDVSARIENLMNSLRSEFGGPQFEPHITVVGAI--RLTAEDALNKFLTACQGIKAYQATVDHVSTGTFFYQCVFLLIHPTTEV

Query:  VETSSHFCKHFGFKNSTPYMPHMSLLYAHISDEKKKQAKEIADKLDEAVNGLKFPITRLALWKTDTSDETLKSWEKIVEHDLSS
        +  + HF  HF       Y+PHMS+LY  +++ +KK+A E A  LD +++GL F I R+ALW TD     + SW K+ EH L S
Subjt:  VETSSHFCKHFGFKNSTPYMPHMSLLYAHISDEKKKQAKEIADKLDEAVNGLKFPITRLALWKTDTSDETLKSWEKIVEHDLSS

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGTGAACCCAGAATCGGCATCTATCCAATCCTCTGAAGAGGAAACCAACGTGTATTCTGTGTGGGCTCTTCCTCCGGAAGATGTGTCCGCCAGAATTGAGAACCTCAT
GAACAGCCTCAGATCCGAGTTCGGCGGGCCCCAATTCGAGCCACATATCACCGTTGTTGGAGCAATCCGTCTCACCGCTGAAGATGCCCTTAACAAATTCCTCACGGCTT
GTCAGGGGATTAAGGCTTATCAAGCCACCGTCGATCATGTATCCACCGGAACTTTCTTCTACCAGTGTGTTTTTCTCCTTATTCATCCTACCACTGAGGTGGTGGAGACC
AGTTCACATTTTTGTAAACATTTTGGTTTCAAAAACTCTACCCCTTACATGCCGCATATGAGCCTACTGTATGCCCACATATCAGATGAAAAAAAGAAGCAGGCAAAGGA
AATAGCAGACAAGCTCGATGAAGCCGTGAACGGCCTAAAATTTCCCATTACTCGACTTGCACTGTGGAAAACAGACACTTCGGATGAAACTCTGAAGTCCTGGGAGAAAA
TTGTAGAACACGATCTTTCTTCAAGTTAG

mRNA sequence

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CTTTAATAAACTTTGATACCCACATCCGTATGCCCTGGGCATGCCGGTGGAATAGGATCAATAAATAATTCTGTCCTAGTGAGCACACATGGCACTCACCATTCACATGT
CGGACAAACTACCTTCCGTCGTTACTTTCTTTCTCAATTTTACTCTGATCAATTAACCGTAACTACATTCCTCCGCCCAACACAATCCTCATCAAAATCCGATTTCTGAA
CCGTTTTATTTCAAATTTCTTCCATTCTCAGCTCCGATGGTGAACCCAGAATCGGCATCTATCCAATCCTCTGAAGAGGAAACCAACGTGTATTCTGTGTGGGCTCTTCC
TCCGGAAGATGTGTCCGCCAGAATTGAGAACCTCATGAACAGCCTCAGATCCGAGTTCGGCGGGCCCCAATTCGAGCCACATATCACCGTTGTTGGAGCAATCCGTCTCA
CCGCTGAAGATGCCCTTAACAAATTCCTCACGGCTTGTCAGGGGATTAAGGCTTATCAAGCCACCGTCGATCATGTATCCACCGGAACTTTCTTCTACCAGTGTGTTTTT
CTCCTTATTCATCCTACCACTGAGGTGGTGGAGACCAGTTCACATTTTTGTAAACATTTTGGTTTCAAAAACTCTACCCCTTACATGCCGCATATGAGCCTACTGTATGC
CCACATATCAGATGAAAAAAAGAAGCAGGCAAAGGAAATAGCAGACAAGCTCGATGAAGCCGTGAACGGCCTAAAATTTCCCATTACTCGACTTGCACTGTGGAAAACAG
ACACTTCGGATGAAACTCTGAAGTCCTGGGAGAAAATTGTAGAACACGATCTTTCTTCAAGTTAGCTTCAGTTTTTTATCCCCTTGAAGATCTAAACTATGTTAGTTTAC
CATGTTTGTTTCAACAATGTCAGAAGATCTAGACTCTGTTCTGTTACACAGTTTACGGTATTTTTGTTTCAACAATGTCTGTACTCCTCTAGACTTCTTAATTGGAAAAA
AAATAAATAAATGTCAGCCGAAGGCCTTGTTTGGCAGCTTACCAAGCTTTGTGATTAGATTGTTTTGAACCTTTTTTGTTATTTAGAAAACAAGTTCATTTGAAACCAAA
GAATTACCACT

Protein sequence

Show/hide protein sequence

MVNPESASIQSSEEETNVYSVWALPPEDVSARIENLMNSLRSEFGGPQFEPHITVVGAIRLTAEDALNKFLTACQGIKAYQATVDHVSTGTFFYQCVFLLIHPTTEVVET
SSHFCKHFGFKNSTPYMPHMSLLYAHISDEKKKQAKEIADKLDEAVNGLKFPITRLALWKTDTSDETLKSWEKIVEHDLSSS

IVF0004589 (gene) of Melon (IVF77) v1 genome