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IVF0004671 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0004671
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr02:20407329..20407973
RNA-Seq ExpressionIVF0004671
SyntenyIVF0004671
Gene Ontology termsGO:0006810 - transport (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033884.1 retrotransposon protein [Cucumis melo var. makuwa]4.90e-4062.02Show/hide
Query:  GRFTEMFADVEFNELVEYEGFDISDGNEMEFPSMYSQRIEMSEDDVRASRPARASN-----------EGSRLEGELDVIHMALEYTNDQLRTIVEWHVCA
        GRF E FAD+  NE   YEGFD+SDGN++EFP MYSQ I++S+DDVR S+PA  S+            GS+ EGELDVI+MAL+  NDQLRTI+EW    
Subjt:  GRFTEMFADVEFNELVEYEGFDISDGNEMEFPSMYSQRIEMSEDDVRASRPARASN-----------EGSRLEGELDVIHMALEYTNDQLRTIVEWHVCA

Query:  LANETFVCREFLRLLREMPDLSSLDRALC
         ANETFV +EFLRLL EMPDLSSLDR LC
Subjt:  LANETFVCREFLRLLREMPDLSSLDRALC

KAA0050806.1 retrotransposon protein [Cucumis melo var. makuwa]2.67e-3757.81Show/hide
Query:  RFTEMFADVEFNELVEYEGFDISDGNEMEFPSMYSQRIEMSEDDVRASRPARASNE-----------GSRLEGELDVIHMALEYTNDQLRTIVEWHVCAL
        RF E F D+  NE + YEGF++SDGNE EF S+YSQ I+MS++DV AS+PA  SN            GS+ +GE+ VIHMAL+  NDQL+ IVEWH  AL
Subjt:  RFTEMFADVEFNELVEYEGFDISDGNEMEFPSMYSQRIEMSEDDVRASRPARASNE-----------GSRLEGELDVIHMALEYTNDQLRTIVEWHVCAL

Query:  ANETFVCREFLRLLREMPDLSSLDRALC
        AN T V +EF+RLLREM +LS+LDRALC
Subjt:  ANETFVCREFLRLLREMPDLSSLDRALC

KAA0051922.1 retrotransposon protein [Cucumis melo var. makuwa]5.17e-3656.25Show/hide
Query:  GRFTEMFADVEFNELVEYEGFDISDGNEMEFPSMYSQRIEMSEDDVRASRPARA-----------SNEGSRLEGELDVIHMALEYTNDQLRTIVEWHVCA
        GRF E F DV  NE   Y+GFD+ DGNE +F S+Y+Q I+MS++DVRASRP  A           +  G++ EGEL+VIHMALE TND LRTI EW  C 
Subjt:  GRFTEMFADVEFNELVEYEGFDISDGNEMEFPSMYSQRIEMSEDDVRASRPARA-----------SNEGSRLEGELDVIHMALEYTNDQLRTIVEWHVCA

Query:  LANETFVCREFLRLLREMPDLSSLDRAL
        L N+  VC+EFL LLREM +L+SL+RAL
Subjt:  LANETFVCREFLRLLREMPDLSSLDRAL

TYK28464.1 retrotransposon protein [Cucumis melo var. makuwa]3.01e-7590.84Show/hide
Query:  MLGRFTEMFADVEFNELVEYEGFDISDGNEMEFPSMYSQRIEMSEDDVRASRPARASN-----------EGSRLEGELDVIHMALEYTNDQLRTIVEWHV
        MLGRFTEMFADVEFNELVEYEGFDISDGNEMEFPSMYSQRIEMSEDDVRASRPARASN            GSRLEGELDVIHMALEYTNDQLRTIVEWHV
Subjt:  MLGRFTEMFADVEFNELVEYEGFDISDGNEMEFPSMYSQRIEMSEDDVRASRPARASN-----------EGSRLEGELDVIHMALEYTNDQLRTIVEWHV

Query:  CALANETFVCREFLRLLREMPDLSSLDRALC
        CALANETFVCREFLRLLREMPDLSSLDRALC
Subjt:  CALANETFVCREFLRLLREMPDLSSLDRALC

XP_016900897.1 PREDICTED: uncharacterized protein LOC103491960 [Cucumis melo]2.75e-3659.23Show/hide
Query:  MRQSASLLRRKCSTTGLGM---LGRFTEMFADVEFNELVEYEGFDISDGNEMEFPSMYSQRIEMSEDDVRASRP-----ARASNEGSRL------EGELD
        MRQSASL RR  S  GL      G+F E F D+E NEL  YEGFD+SD N+MEFP MYSQRI MS+DDVRASRP     +R  + GS+       EGE++
Subjt:  MRQSASLLRRKCSTTGLGM---LGRFTEMFADVEFNELVEYEGFDISDGNEMEFPSMYSQRIEMSEDDVRASRP-----ARASNEGSRL------EGELD

Query:  VIHMALEYTNDQLRTIVEWHVCALANETFV
        +IHMALE  NDQLRTIVEW   ALAN+T V
Subjt:  VIHMALEYTNDQLRTIVEWHVCALANETFV

TrEMBL top hitse value%identityAlignment
A0A1S4DY48 uncharacterized protein LOC1034919601.8e-2759.23Show/hide
Query:  MRQSASLLRRKCSTTGL---GMLGRFTEMFADVEFNELVEYEGFDISDGNEMEFPSMYSQRIEMSEDDVRASRP-----ARASNEGSR------LEGELD
        MRQSASL RR  S  GL      G+F E F D+E NEL  YEGFD+SD N+MEFP MYSQRI MS+DDVRASRP     +R  + GS+       EGE++
Subjt:  MRQSASLLRRKCSTTGL---GMLGRFTEMFADVEFNELVEYEGFDISDGNEMEFPSMYSQRIEMSEDDVRASRP-----ARASNEGSR------LEGELD

Query:  VIHMALEYTNDQLRTIVEWHVCALANETFV
        +IHMALE  NDQLRTIVEW   ALAN+T V
Subjt:  VIHMALEYTNDQLRTIVEWHVCALANETFV

A0A5A7U9D5 Retrotransposon protein4.4e-2957.81Show/hide
Query:  RFTEMFADVEFNELVEYEGFDISDGNEMEFPSMYSQRIEMSEDDVRASRPARASN-----------EGSRLEGELDVIHMALEYTNDQLRTIVEWHVCAL
        RF E F D+  NE + YEGF++SDGNE EF S+YSQ I+MS++DV AS+PA  SN            GS+ +GE+ VIHMAL+  NDQL+ IVEWH  AL
Subjt:  RFTEMFADVEFNELVEYEGFDISDGNEMEFPSMYSQRIEMSEDDVRASRPARASN-----------EGSRLEGELDVIHMALEYTNDQLRTIVEWHVCAL

Query:  ANETFVCREFLRLLREMPDLSSLDRALC
        AN T V +EF+RLLREM +LS+LDRALC
Subjt:  ANETFVCREFLRLLREMPDLSSLDRALC

A0A5D3BQI7 Retrotransposon protein1.1e-3262.02Show/hide
Query:  GRFTEMFADVEFNELVEYEGFDISDGNEMEFPSMYSQRIEMSEDDVRASRPARASN-----------EGSRLEGELDVIHMALEYTNDQLRTIVEWHVCA
        GRF E FAD+  NE   YEGFD+SDGN++EFP MYSQ I++S+DDVR S+PA  S+            GS+ EGELDVI+MAL+  NDQLRTI+EW    
Subjt:  GRFTEMFADVEFNELVEYEGFDISDGNEMEFPSMYSQRIEMSEDDVRASRPARASN-----------EGSRLEGELDVIHMALEYTNDQLRTIVEWHVCA

Query:  LANETFVCREFLRLLREMPDLSSLDRALC
         ANETFV +EFLRLL EMPDLSSLDR LC
Subjt:  LANETFVCREFLRLLREMPDLSSLDRALC

A0A5D3CLE8 Retrotransposon protein8.3e-2856.25Show/hide
Query:  GRFTEMFADVEFNELVEYEGFDISDGNEMEFPSMYSQRIEMSEDDVRASRPARA-----------SNEGSRLEGELDVIHMALEYTNDQLRTIVEWHVCA
        GRF E F DV  NE   Y+GFD+ DGNE +F S+Y+Q I+MS++DVRASRP  A           +  G++ EGEL+VIHMALE TND LRTI EW  C 
Subjt:  GRFTEMFADVEFNELVEYEGFDISDGNEMEFPSMYSQRIEMSEDDVRASRPARA-----------SNEGSRLEGELDVIHMALEYTNDQLRTIVEWHVCA

Query:  LANETFVCREFLRLLREMPDLSSLDRAL
        L N+  VC+EFL LLREM +L+SL+RAL
Subjt:  LANETFVCREFLRLLREMPDLSSLDRAL

A0A5D3DY31 Retrotransposon protein2.2e-5790.84Show/hide
Query:  MLGRFTEMFADVEFNELVEYEGFDISDGNEMEFPSMYSQRIEMSEDDVRASRPARASN-----------EGSRLEGELDVIHMALEYTNDQLRTIVEWHV
        MLGRFTEMFADVEFNELVEYEGFDISDGNEMEFPSMYSQRIEMSEDDVRASRPARASN            GSRLEGELDVIHMALEYTNDQLRTIVEWHV
Subjt:  MLGRFTEMFADVEFNELVEYEGFDISDGNEMEFPSMYSQRIEMSEDDVRASRPARASN-----------EGSRLEGELDVIHMALEYTNDQLRTIVEWHV

Query:  CALANETFVCREFLRLLREMPDLSSLDRALC
        CALANETFVCREFLRLLREMPDLSSLDRALC
Subjt:  CALANETFVCREFLRLLREMPDLSSLDRALC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTTGGATGGAAAGATGAGGCAAAGTGCATCATTGTTAAGAAGGAAGTGTTCGACAACTGGGTTGGGGATGTTGGGTCGCTTTACAGAAATGTTCGCCGATGTCGA
GTTTAACGAGCTTGTCGAGTATGAGGGATTTGACATATCGGATGGAAACGAAATGGAGTTCCCATCCATGTACAGCCAGAGGATTGAAATGTCCGAGGATGATGTACGTG
CATCACGACCTGCTCGTGCATCAAACGAGGGAAGCCGACTGGAGGGTGAGCTTGACGTGATACATATGGCCCTAGAGTATACGAATGACCAACTCAGGACCATTGTCGAG
TGGCATGTATGCGCCCTTGCCAACGAGACATTTGTTTGCCGGGAATTCTTACGCCTATTGCGTGAGATGCCCGACCTAAGCAGTTTGGATAGGGCATTGTGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGTTTGGATGGAAAGATGAGGCAAAGTGCATCATTGTTAAGAAGGAAGTGTTCGACAACTGGGTTGGGGATGTTGGGTCGCTTTACAGAAATGTTCGCCGATGTCGA
GTTTAACGAGCTTGTCGAGTATGAGGGATTTGACATATCGGATGGAAACGAAATGGAGTTCCCATCCATGTACAGCCAGAGGATTGAAATGTCCGAGGATGATGTACGTG
CATCACGACCTGCTCGTGCATCAAACGAGGGAAGCCGACTGGAGGGTGAGCTTGACGTGATACATATGGCCCTAGAGTATACGAATGACCAACTCAGGACCATTGTCGAG
TGGCATGTATGCGCCCTTGCCAACGAGACATTTGTTTGCCGGGAATTCTTACGCCTATTGCGTGAGATGCCCGACCTAAGCAGTTTGGATAGGGCATTGTGCTAA
Protein sequenceShow/hide protein sequence
MGLDGKMRQSASLLRRKCSTTGLGMLGRFTEMFADVEFNELVEYEGFDISDGNEMEFPSMYSQRIEMSEDDVRASRPARASNEGSRLEGELDVIHMALEYTNDQLRTIVE
WHVCALANETFVCREFLRLLREMPDLSSLDRALC