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IVF0004676 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0004676
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionConserved oligomeric Golgi complex subunit 6
Genome locationchr07:6325055..6325216
RNA-Seq ExpressionIVF0004676
SyntenyIVF0004676
Gene Ontology termsGO:0006891 - intra-Golgi vesicle-mediated transport (biological process)
GO:0015031 - protein transport (biological process)
GO:0000139 - Golgi membrane (cellular component)
GO:0017119 - Golgi transport complex (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052229.1 conserved oligomeric Golgi complex subunit 6 [Cucumis melo var. makuwa]3.51e-30100Show/hide
Query:  MEACIQVARSVAEAYELIYDTIMDPNNRYSDPTTCKASFKPDKNDFGNITIEI
        MEACIQVARSVAEAYELIYDTIMDPNNRYSDPTTCKASFKPDKNDFGNITIEI
Subjt:  MEACIQVARSVAEAYELIYDTIMDPNNRYSDPTTCKASFKPDKNDFGNITIEI
KAE8649614.1 hypothetical protein Csa_012223 [Cucumis sativus]2.91e-2180.77Show/hide
Query:  EACIQVARSVAEAYELIYDTIMDPNNRYSDPTTCKASFKPDKNDFGNITIEI
        EAC+QVARS++EA +LIY+TIMDPNNRY DPT CKAS KPDK DFGNITIEI
Subjt:  EACIQVARSVAEAYELIYDTIMDPNNRYSDPTTCKASFKPDKNDFGNITIEI
PON71609.1 hypothetical protein TorRG33x02_254050 [Trema orientale]3.35e-0963.27Show/hide
Query:  EACIQVARSVAEAYELIYDTIMDPNNRYSDP-TTCKASFKPDKNDFGNI
        EA +QVARS+AEAYELIY+ IMD  N Y +P  T +AS  PDK+ FGNI
Subjt:  EACIQVARSVAEAYELIYDTIMDPNNRYSDP-TTCKASFKPDKNDFGNI
XP_004142643.1 conserved oligomeric Golgi complex subunit 6 [Cucumis sativus]1.93e-0887.1Show/hide
Query:  EACIQVARSVAEAYELIYDTIMDPNNRYSDP
        EACIQVARS+AEAYELIYD IMDPNN Y DP
Subjt:  EACIQVARSVAEAYELIYDTIMDPNNRYSDP
XP_008444218.2 PREDICTED: conserved oligomeric Golgi complex subunit 6 [Cucumis melo]1.93e-0887.1Show/hide
Query:  EACIQVARSVAEAYELIYDTIMDPNNRYSDP
        EACIQVARS+AEAYELIYD IMDPNN Y DP
Subjt:  EACIQVARSVAEAYELIYDTIMDPNNRYSDP
TrEMBL top hitse value%identityAlignment
A0A0A0L1U3 Conserved oligomeric Golgi complex subunit 67.3e-0687.1Show/hide
Query:  EACIQVARSVAEAYELIYDTIMDPNNRYSDP
        EACIQVARS+AEAYELIYD IMDPNN Y DP
Subjt:  EACIQVARSVAEAYELIYDTIMDPNNRYSDP
A0A0A0L353 Conserved oligomeric Golgi complex subunit 61.3e-1580.77Show/hide
Query:  EACIQVARSVAEAYELIYDTIMDPNNRYSDPTTCKASFKPDKNDFGNITIEI
        EAC+QVARS++EA +LIY+TIMDPNNRY DPT CKAS KPDK DFGNITIEI
Subjt:  EACIQVARSVAEAYELIYDTIMDPNNRYSDPTTCKASFKPDKNDFGNITIEI
A0A2P5DEB1 Uncharacterized protein7.3e-0663.27Show/hide
Query:  EACIQVARSVAEAYELIYDTIMDPNNRYSDP-TTCKASFKPDKNDFGNI
        EA +QVARS+AEAYELIY+ IMD  N Y +P  T +AS  PDK+ FGNI
Subjt:  EACIQVARSVAEAYELIYDTIMDPNNRYSDP-TTCKASFKPDKNDFGNI
A0A5A7UEV6 Conserved oligomeric Golgi complex subunit 67.3e-0687.1Show/hide
Query:  EACIQVARSVAEAYELIYDTIMDPNNRYSDP
        EACIQVARS+AEAYELIYD IMDPNN Y DP
Subjt:  EACIQVARSVAEAYELIYDTIMDPNNRYSDP
A0A5A7UFH5 Conserved oligomeric Golgi complex subunit 65.6e-22100Show/hide
Query:  MEACIQVARSVAEAYELIYDTIMDPNNRYSDPTTCKASFKPDKNDFGNITIEI
        MEACIQVARSVAEAYELIYDTIMDPNNRYSDPTTCKASFKPDKNDFGNITIEI
Subjt:  MEACIQVARSVAEAYELIYDTIMDPNNRYSDPTTCKASFKPDKNDFGNITIEI
SwissProt top hitse value%identityAlignment
Q6NMI3 Conserved oligomeric Golgi complex subunit 65.0e-0447.62Show/hide
Query:  EACIQVARSVAEAYELIYDTIMDPNNRYSDPTTCKASFKPDK
        EAC++VA+++AEAYE+IY  + D  N Y DP +  A   PD+
Subjt:  EACIQVARSVAEAYELIYDTIMDPNNRYSDPTTCKASFKPDK
Arabidopsis top hitse value%identityAlignment
AT1G31780.1 CONTAINS InterPro DOMAIN/s: Conserved oligomeric complex COG6 (InterPro:IPR010490); Has 384 Blast hits to 379 proteins in 190 species: Archae - 0; Bacteria - 4; Metazoa - 151; Fungi - 156; Plants - 42; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink).3.6e-0547.62Show/hide
Query:  EACIQVARSVAEAYELIYDTIMDPNNRYSDPTTCKASFKPDK
        EAC++VA+++AEAYE+IY  + D  N Y DP +  A   PD+
Subjt:  EACIQVARSVAEAYELIYDTIMDPNNRYSDPTTCKASFKPDK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGCCTGTATTCAAGTGGCTCGATCAGTGGCTGAAGCTTACGAACTTATATACGACACAATCATGGATCCAAACAACAGGTACTCAGACCCTACTACTTGCAAGGC
ATCCTTCAAACCAGATAAGAACGATTTTGGGAATATAACTATAGAGATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGCCTGTATTCAAGTGGCTCGATCAGTGGCTGAAGCTTACGAACTTATATACGACACAATCATGGATCCAAACAACAGGTACTCAGACCCTACTACTTGCAAGGC
ATCCTTCAAACCAGATAAGAACGATTTTGGGAATATAACTATAGAGATTTGA
Protein sequenceShow/hide protein sequence
MEACIQVARSVAEAYELIYDTIMDPNNRYSDPTTCKASFKPDKNDFGNITIEI