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IVF0004716 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0004716
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr10:18483494..18483901
RNA-Seq ExpressionIVF0004716
SyntenyIVF0004716
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049583.1 retrotransposon protein [Cucumis melo var. makuwa]1.94e-2641.09Show/hide
Query:  MYNQGMNVSPEDMMGARPGRYNDCRLSSSGSKRKHRGWTIMTVNVIHEAIDCTNDLLRAIAEWLKITRHEEDAIRREVIRQLQVIPQLSVLDSVQCMMLM
        MY+QG+N+SP+D+MG R  + N+ R  SSGSKRK  G    + +++  AI+  ++ L  IA+W  + R +    R+EV+RQL+ IP+L+++D  + M ++
Subjt:  MYNQGMNVSPEDMMGARPGRYNDCRLSSSGSKRKHRGWTIMTVNVIHEAIDCTNDLLRAIAEWLKITRHEEDAIRREVIRQLQVIPQLSVLDSVQCMMLM

Query:  IQKLTIIKAFLDLSDDIKLAYCNTILHNN
        ++ +  +KAFLD+SD+IK  YC+ IL  N
Subjt:  IQKLTIIKAFLDLSDDIKLAYCNTILHNN

KAA0056454.1 retrotransposon protein [Cucumis melo var. makuwa]2.62e-90100Show/hide
Query:  MEFAIMYNQGMNVSPEDMMGARPGRYNDCRLSSSGSKRKHRGWTIMTVNVIHEAIDCTNDLLRAIAEWLKITRHEEDAIRREVIRQLQVIPQLSVLDSVQ
        MEFAIMYNQGMNVSPEDMMGARPGRYNDCRLSSSGSKRKHRGWTIMTVNVIHEAIDCTNDLLRAIAEWLKITRHEEDAIRREVIRQLQVIPQLSVLDSVQ
Subjt:  MEFAIMYNQGMNVSPEDMMGARPGRYNDCRLSSSGSKRKHRGWTIMTVNVIHEAIDCTNDLLRAIAEWLKITRHEEDAIRREVIRQLQVIPQLSVLDSVQ

Query:  CMMLMIQKLTIIKAFLDLSDDIKLAYCNTILHNNP
        CMMLMIQKLTIIKAFLDLSDDIKLAYCNTILHNNP
Subjt:  CMMLMIQKLTIIKAFLDLSDDIKLAYCNTILHNNP

KAA0060529.1 retrotransposon protein [Cucumis melo var. makuwa]2.71e-2843.28Show/hide
Query:  MEFAIMYNQGMNVSPEDMMGARPGRYNDCRLSSSGSKRKHRGWTIMTVNVIHEAIDCTNDLLRAIAEWLKITRHEEDAIRREVIRQLQVIPQLSVLDSVQ
        ME  +MY+QG+++  +D+MG RP R  + R  SSGSKRK  G  + T+ +I   ++ +ND L+AI EWL + R +  A   EV+RQLQ IP+LS  D V+
Subjt:  MEFAIMYNQGMNVSPEDMMGARPGRYNDCRLSSSGSKRKHRGWTIMTVNVIHEAIDCTNDLLRAIAEWLKITRHEEDAIRREVIRQLQVIPQLSVLDSVQ

Query:  CMMLMIQKLTIIKAFLDLSDDIKLAYCNTILHNN
         M +++  +  +KAFLD+ D++KL YC  I  +N
Subjt:  CMMLMIQKLTIIKAFLDLSDDIKLAYCNTILHNN

KAA0066582.1 retrotransposon protein [Cucumis melo var. makuwa]1.65e-2956.14Show/hide
Query:  NQGMNVSPEDMMGARPGRYNDCRLSSSGSKRKHRGWTIMTVNVIHEAIDCTNDLLRAIAEWLKITRHEEDAIRREVIRQLQVIPQLSVLDSVQCMMLMIQ
        +Q +N+S EDMMGA+P R +DCR  SSG KRK     + TV+VI   + C NDLLRAI +W K+ R EEDA RREVIRQLQ IP+LS LD V+ + ++  
Subjt:  NQGMNVSPEDMMGARPGRYNDCRLSSSGSKRKHRGWTIMTVNVIHEAIDCTNDLLRAIAEWLKITRHEEDAIRREVIRQLQVIPQLSVLDSVQCMMLMIQ

Query:  KLTIIKAFLDLSDD
         L I+KAFLDL  D
Subjt:  KLTIIKAFLDLSDD

TYK15318.1 retrotransposon protein [Cucumis melo var. makuwa]3.91e-3156.14Show/hide
Query:  NQGMNVSPEDMMGARPGRYNDCRLSSSGSKRKHRGWTIMTVNVIHEAIDCTNDLLRAIAEWLKITRHEEDAIRREVIRQLQVIPQLSVLDSVQCMMLMIQ
        +Q +N+S EDMMGA+P R +DCR  SSG KRK     + TV+VI + + C NDLLRAI +W K+ R EEDA RREVIRQLQ IP+LS LD V+ + ++  
Subjt:  NQGMNVSPEDMMGARPGRYNDCRLSSSGSKRKHRGWTIMTVNVIHEAIDCTNDLLRAIAEWLKITRHEEDAIRREVIRQLQVIPQLSVLDSVQCMMLMIQ

Query:  KLTIIKAFLDLSDD
         L I+KAFLDL  D
Subjt:  KLTIIKAFLDLSDD

TrEMBL top hitse value%identityAlignment
A0A5A7U169 Retrotransposon protein2.7e-2041.09Show/hide
Query:  MYNQGMNVSPEDMMGARPGRYNDCRLSSSGSKRKHRGWTIMTVNVIHEAIDCTNDLLRAIAEWLKITRHEEDAIRREVIRQLQVIPQLSVLDSVQCMMLM
        MY+QG+N+SP+D+MG R  + N+ R  SSGSKRK  G    + +++  AI+  ++ L  IA+W  + R +    R+EV+RQL+ IP+L+++D  + M ++
Subjt:  MYNQGMNVSPEDMMGARPGRYNDCRLSSSGSKRKHRGWTIMTVNVIHEAIDCTNDLLRAIAEWLKITRHEEDAIRREVIRQLQVIPQLSVLDSVQCMMLM

Query:  IQKLTIIKAFLDLSDDIKLAYCNTILHNN
        ++ +  +KAFLD+SD+IK  YC+ IL  N
Subjt:  IQKLTIIKAFLDLSDDIKLAYCNTILHNN

A0A5A7UMN4 Retrotransposon protein1.8e-69100Show/hide
Query:  MEFAIMYNQGMNVSPEDMMGARPGRYNDCRLSSSGSKRKHRGWTIMTVNVIHEAIDCTNDLLRAIAEWLKITRHEEDAIRREVIRQLQVIPQLSVLDSVQ
        MEFAIMYNQGMNVSPEDMMGARPGRYNDCRLSSSGSKRKHRGWTIMTVNVIHEAIDCTNDLLRAIAEWLKITRHEEDAIRREVIRQLQVIPQLSVLDSVQ
Subjt:  MEFAIMYNQGMNVSPEDMMGARPGRYNDCRLSSSGSKRKHRGWTIMTVNVIHEAIDCTNDLLRAIAEWLKITRHEEDAIRREVIRQLQVIPQLSVLDSVQ

Query:  CMMLMIQKLTIIKAFLDLSDDIKLAYCNTILHNNP
        CMMLMIQKLTIIKAFLDLSDDIKLAYCNTILHNNP
Subjt:  CMMLMIQKLTIIKAFLDLSDDIKLAYCNTILHNNP

A0A5A7V469 Retrotransposon protein3.7e-2243.28Show/hide
Query:  MEFAIMYNQGMNVSPEDMMGARPGRYNDCRLSSSGSKRKHRGWTIMTVNVIHEAIDCTNDLLRAIAEWLKITRHEEDAIRREVIRQLQVIPQLSVLDSVQ
        ME  +MY+QG+++  +D+MG RP R  + R  SSGSKRK  G  + T+ +I   ++ +ND L+AI EWL + R +  A   EV+RQLQ IP+LS  D V+
Subjt:  MEFAIMYNQGMNVSPEDMMGARPGRYNDCRLSSSGSKRKHRGWTIMTVNVIHEAIDCTNDLLRAIAEWLKITRHEEDAIRREVIRQLQVIPQLSVLDSVQ

Query:  CMMLMIQKLTIIKAFLDLSDDIKLAYCNTILHNN
         M +++  +  +KAFLD+ D++KL YC  I  +N
Subjt:  CMMLMIQKLTIIKAFLDLSDDIKLAYCNTILHNN

A0A5A7VE05 Retrotransposon protein4.4e-2355.65Show/hide
Query:  NQGMNVSPEDMMGARPGRYNDCRLSSSGSKRKHRGWTIMTVNVIHEAIDCTNDLLRAIAEWLKITRHEEDAIRREVIRQLQVIPQLSVLDSVQCMMLMIQ
        +Q +N+S EDMMGA+P R +DCR  SSG KRK     + TV+VI   + C NDLLRAI +W K+ R EEDA RREVIRQLQ IP+LS LD V+ + ++  
Subjt:  NQGMNVSPEDMMGARPGRYNDCRLSSSGSKRKHRGWTIMTVNVIHEAIDCTNDLLRAIAEWLKITRHEEDAIRREVIRQLQVIPQLSVLDSVQCMMLMIQ

Query:  KLTIIKAFLDLSDDI
         L I+KAFLDL  D+
Subjt:  KLTIIKAFLDLSDDI

A0A5D3CVP7 Retrotransposon protein6.8e-2455.65Show/hide
Query:  NQGMNVSPEDMMGARPGRYNDCRLSSSGSKRKHRGWTIMTVNVIHEAIDCTNDLLRAIAEWLKITRHEEDAIRREVIRQLQVIPQLSVLDSVQCMMLMIQ
        +Q +N+S EDMMGA+P R +DCR  SSG KRK     + TV+VI + + C NDLLRAI +W K+ R EEDA RREVIRQLQ IP+LS LD V+ + ++  
Subjt:  NQGMNVSPEDMMGARPGRYNDCRLSSSGSKRKHRGWTIMTVNVIHEAIDCTNDLLRAIAEWLKITRHEEDAIRREVIRQLQVIPQLSVLDSVQCMMLMIQ

Query:  KLTIIKAFLDLSDDI
         L I+KAFLDL  D+
Subjt:  KLTIIKAFLDLSDDI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTTTGCTATTATGTACAACCAAGGAATGAACGTGTCGCCCGAAGACATGATGGGCGCACGACCTGGTAGGTATAACGACTGTAGGCTAAGTTCCAGTGGATCGAA
GAGGAAGCATAGAGGGTGGACTATCATGACTGTGAATGTCATTCACGAAGCCATAGACTGTACGAATGACTTGCTCAGAGCCATTGCAGAATGGCTGAAGATAACTAGGC
ATGAGGAAGATGCTATACGGCGGGAAGTCATTAGACAGTTGCAGGTTATCCCTCAACTAAGTGTATTGGACAGTGTGCAATGTATGATGCTAATGATACAAAAGCTAACC
ATCATAAAAGCCTTCCTGGACCTATCCGACGATATAAAGCTCGCATACTGCAACACCATTTTGCACAATAACCCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGTTTGCTATTATGTACAACCAAGGAATGAACGTGTCGCCCGAAGACATGATGGGCGCACGACCTGGTAGGTATAACGACTGTAGGCTAAGTTCCAGTGGATCGAA
GAGGAAGCATAGAGGGTGGACTATCATGACTGTGAATGTCATTCACGAAGCCATAGACTGTACGAATGACTTGCTCAGAGCCATTGCAGAATGGCTGAAGATAACTAGGC
ATGAGGAAGATGCTATACGGCGGGAAGTCATTAGACAGTTGCAGGTTATCCCTCAACTAAGTGTATTGGACAGTGTGCAATGTATGATGCTAATGATACAAAAGCTAACC
ATCATAAAAGCCTTCCTGGACCTATCCGACGATATAAAGCTCGCATACTGCAACACCATTTTGCACAATAACCCGTGA
Protein sequenceShow/hide protein sequence
MEFAIMYNQGMNVSPEDMMGARPGRYNDCRLSSSGSKRKHRGWTIMTVNVIHEAIDCTNDLLRAIAEWLKITRHEEDAIRREVIRQLQVIPQLSVLDSVQCMMLMIQKLT
IIKAFLDLSDDIKLAYCNTILHNNP