CuGenDBv2

Gene ID	IVF0004724
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	LINE-1 retrotransposable element ORF2 protein
Genome location	chr08:29352173..29352670
RNA-Seq Expression	IVF0004724
Synteny	IVF0004724
Gene Ontology terms	GO:0007165 - signal transduction (biological process) GO:0003953 - NAD+ nucleosidase activity (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0034017.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]

2.15e-84

79.39

Show/hide

Query:  MGRWWENSIQDGHPGFSFIQRLKSLANFIKPWQKEKLHSLTYAKDNIIREVESIDKKEVDTPLTQEESNRRLALKADLSELSLKESQFWYQRAKKLWLRE
        M RWW+ S Q GHP F+FIQRLKSLAN IKPWQKEK HSLT AKDNIIREV++IDKKE+DTPL QE+S+RRLALKA+LS+LSLKESQFW+QRAKKLWL+E
Subjt:  MGRWWENSIQDGHPGFSFIQRLKSLANFIKPWQKEKLHSLTYAKDNIIREVESIDKKEVDTPLTQEESNRRLALKADLSELSLKESQFWYQRAKKLWLRE

Query:  GDENSSFFHRICSSRQKRSFIHEIQDEVGLIQNTNISISTAFIKFFSRIYRSSTKSDPLFIDNLD
        GDENS+FFHRICSSRQKR+ IHEIQDE G IQNTN +IS AF+ +FSR+YRSSTK DPLFIDNL+
Subjt:  GDENSSFFHRICSSRQKRSFIHEIQDEVGLIQNTNISISTAFIKFFSRIYRSSTKSDPLFIDNLD

KAA0037445.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]

2.99e-102

96.36

Show/hide

Query:  MGRWWENSIQDGHPGFSFIQRLKSLANFIKPWQKEKLHSLTYAKDNIIREVESIDKKEVDTPLTQEESNRRLALKADLSELSLKESQFWYQRAKKLWLRE
        MGRWWENSIQDGHPGFSFIQRLKSLANFI PWQKEKLHSLTYAKDNIIREV+SIDKKE+DTPLTQEESNRRLALKADLSELSLKESQFWYQRAKKLWLRE
Subjt:  MGRWWENSIQDGHPGFSFIQRLKSLANFIKPWQKEKLHSLTYAKDNIIREVESIDKKEVDTPLTQEESNRRLALKADLSELSLKESQFWYQRAKKLWLRE

Query:  GDENSSFFHRICSSRQKRSFIHEIQDEVGLIQNTNISISTAFIKFFSRIYRSSTKSDPLFIDNLD
        GDENSSFFHRICSSRQKRSFIHEIQDE GLIQNTN  ISTAFIKFFSRIYRSSTKSDPLFIDNLD
Subjt:  GDENSSFFHRICSSRQKRSFIHEIQDEVGLIQNTNISISTAFIKFFSRIYRSSTKSDPLFIDNLD

KAA0046762.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]

2.09e-88

84.85

Show/hide

Query:  MGRWWENSIQDGHPGFSFIQRLKSLANFIKPWQKEKLHSLTYAKDNIIREVESIDKKEVDTPLTQEESNRRLALKADLSELSLKESQFWYQRAKKLWLRE
        MGRWW+NS+QDGHPG+SFIQRLKSLANFIKPWQKEKL+S   AKD+IIREV+SIDKKE+DTPL+QEES+RRLALKADLSELSLKESQFWYQRAKKLWLRE
Subjt:  MGRWWENSIQDGHPGFSFIQRLKSLANFIKPWQKEKLHSLTYAKDNIIREVESIDKKEVDTPLTQEESNRRLALKADLSELSLKESQFWYQRAKKLWLRE

Query:  GDENSSFFHRICSSRQKRSFIHEIQDEVGLIQNTNISISTAFIKFFSRIYRSSTKSDPLFIDNLD
        GDENSSFFHRIC++RQKR+FI EIQDE GLIQN+N SIS+AFIKFFSRI+R  TKSDP FIDNL+
Subjt:  GDENSSFFHRICSSRQKRSFIHEIQDEVGLIQNTNISISTAFIKFFSRIYRSSTKSDPLFIDNLD

KAA0058104.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]

1.37e-83

78.79

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Query:  MGRWWENSIQDGHPGFSFIQRLKSLANFIKPWQKEKLHSLTYAKDNIIREVESIDKKEVDTPLTQEESNRRLALKADLSELSLKESQFWYQRAKKLWLRE
        M RWWE SIQ+GHPGFSFIQRLKSLAN IKPWQKEK HSLT AK+NIIREV++IDK E+DTPL+QEESNRRLALKA+L++LSLKESQFW+QRAKKLW++E
Subjt:  MGRWWENSIQDGHPGFSFIQRLKSLANFIKPWQKEKLHSLTYAKDNIIREVESIDKKEVDTPLTQEESNRRLALKADLSELSLKESQFWYQRAKKLWLRE

Query:  GDENSSFFHRICSSRQKRSFIHEIQDEVGLIQNTNISISTAFIKFFSRIYRSSTKSDPLFIDNLD
        GDEN +FFHRICSSRQKR+ IHEIQ+E G IQNTN +IS AF+  FSRIYR STK DPLFI+NL+
Subjt:  GDENSSFFHRICSSRQKRSFIHEIQDEVGLIQNTNISISTAFIKFFSRIYRSSTKSDPLFIDNLD

TYJ99315.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]

9.25e-95

93.94

Show/hide

Query:  MGRWWENSIQDGHPGFSFIQRLKSLANFIKPWQKEKLHSLTYAKDNIIREVESIDKKEVDTPLTQEESNRRLALKADLSELSLKESQFWYQRAKKLWLRE
        MGRWWENSIQ G+PGFSFIQRLKSLANFIKPWQKEKLHSLTYAK+ IIREV+SIDKKE+DTPLTQEESNRRLALKADLSELSLKESQFWYQRAKKLWLRE
Subjt:  MGRWWENSIQDGHPGFSFIQRLKSLANFIKPWQKEKLHSLTYAKDNIIREVESIDKKEVDTPLTQEESNRRLALKADLSELSLKESQFWYQRAKKLWLRE

Query:  GDENSSFFHRICSSRQKRSFIHEIQDEVGLIQNTNISISTAFIKFFSRIYRSSTKSDPLFIDNLD
        GDENSSFFHRICSSRQKRSFIHEIQDE G IQNTN SISTAFIKFFSRIYRSSTKSDPLFI+NLD
Subjt:  GDENSSFFHRICSSRQKRSFIHEIQDEVGLIQNTNISISTAFIKFFSRIYRSSTKSDPLFIDNLD

TrEMBL top hits

e value

%identity

Alignment

A0A5A7TTK1 LINE-1 retrotransposable element ORF2 protein

6.1e-75

84.85

Show/hide

Query:  MGRWWENSIQDGHPGFSFIQRLKSLANFIKPWQKEKLHSLTYAKDNIIREVESIDKKEVDTPLTQEESNRRLALKADLSELSLKESQFWYQRAKKLWLRE
        MGRWW+NS+QDGHPG+SFIQRLKSLANFIKPWQKEKL+S   AKD+IIREV+SIDKKE+DTPL+QEES+RRLALKADLSELSLKESQFWYQRAKKLWLRE
Subjt:  MGRWWENSIQDGHPGFSFIQRLKSLANFIKPWQKEKLHSLTYAKDNIIREVESIDKKEVDTPLTQEESNRRLALKADLSELSLKESQFWYQRAKKLWLRE

Query:  GDENSSFFHRICSSRQKRSFIHEIQDEVGLIQNTNISISTAFIKFFSRIYRSSTKSDPLFIDNLD
        GDENSSFFHRIC++RQKR+FI EIQDE GLIQN+N SIS+AFIKFFSRI+R  TKSDP FIDNL+
Subjt:  GDENSSFFHRICSSRQKRSFIHEIQDEVGLIQNTNISISTAFIKFFSRIYRSSTKSDPLFIDNLD

A0A5D3BLV7 LINE-1 retrotransposable element ORF2 protein

1.5e-81

93.94

Show/hide

Query:  MGRWWENSIQDGHPGFSFIQRLKSLANFIKPWQKEKLHSLTYAKDNIIREVESIDKKEVDTPLTQEESNRRLALKADLSELSLKESQFWYQRAKKLWLRE
        MGRWWENSIQ G+PGFSFIQRLKSLANFIKPWQKEKLHSLTYAK+ IIREV+SIDKKE+DTPLTQEESNRRLALKADLSELSLKESQFWYQRAKKLWLRE
Subjt:  MGRWWENSIQDGHPGFSFIQRLKSLANFIKPWQKEKLHSLTYAKDNIIREVESIDKKEVDTPLTQEESNRRLALKADLSELSLKESQFWYQRAKKLWLRE

Query:  GDENSSFFHRICSSRQKRSFIHEIQDEVGLIQNTNISISTAFIKFFSRIYRSSTKSDPLFIDNLD
        GDENSSFFHRICSSRQKRSFIHEIQDE G IQNTN SISTAFIKFFSRIYRSSTKSDPLFI+NLD
Subjt:  GDENSSFFHRICSSRQKRSFIHEIQDEVGLIQNTNISISTAFIKFFSRIYRSSTKSDPLFIDNLD

A0A5D3BT10 LINE-1 retrotransposable element ORF2 protein

7.7e-70

79.39

Show/hide

Query:  MGRWWENSIQDGHPGFSFIQRLKSLANFIKPWQKEKLHSLTYAKDNIIREVESIDKKEVDTPLTQEESNRRLALKADLSELSLKESQFWYQRAKKLWLRE
        M RWW+ S Q GHP F+FIQRLKSLAN IKPWQKEK HSLT AKDNIIREV++IDKKE+DTPL QE+S+RRLALKA+LS+LSLKESQFW+QRAKKLWL+E
Subjt:  MGRWWENSIQDGHPGFSFIQRLKSLANFIKPWQKEKLHSLTYAKDNIIREVESIDKKEVDTPLTQEESNRRLALKADLSELSLKESQFWYQRAKKLWLRE

Query:  GDENSSFFHRICSSRQKRSFIHEIQDEVGLIQNTNISISTAFIKFFSRIYRSSTKSDPLFIDNLD
        GDENS+FFHRICSSRQKR+ IHEIQDE G IQNTN +IS AF+ +FSR+YRSSTK DPLFIDNL+
Subjt:  GDENSSFFHRICSSRQKRSFIHEIQDEVGLIQNTNISISTAFIKFFSRIYRSSTKSDPLFIDNLD

A0A5D3BUZ3 LINE-1 retrotransposable element ORF2 protein

1.1e-84

96.36

Show/hide

Query:  MGRWWENSIQDGHPGFSFIQRLKSLANFIKPWQKEKLHSLTYAKDNIIREVESIDKKEVDTPLTQEESNRRLALKADLSELSLKESQFWYQRAKKLWLRE
        MGRWWENSIQDGHPGFSFIQRLKSLANFI PWQKEKLHSLTYAKDNIIREV+SIDKKE+DTPLTQEESNRRLALKADLSELSLKESQFWYQRAKKLWLRE
Subjt:  MGRWWENSIQDGHPGFSFIQRLKSLANFIKPWQKEKLHSLTYAKDNIIREVESIDKKEVDTPLTQEESNRRLALKADLSELSLKESQFWYQRAKKLWLRE

Query:  GDENSSFFHRICSSRQKRSFIHEIQDEVGLIQNTNISISTAFIKFFSRIYRSSTKSDPLFIDNLD
        GDENSSFFHRICSSRQKRSFIHEIQDE GLIQNTN  ISTAFIKFFSRIYRSSTKSDPLFIDNLD
Subjt:  GDENSSFFHRICSSRQKRSFIHEIQDEVGLIQNTNISISTAFIKFFSRIYRSSTKSDPLFIDNLD

A0A5D3C3M3 LINE-1 retrotransposable element ORF2 protein

5.9e-70

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Query:  MGRWWENSIQDGHPGFSFIQRLKSLANFIKPWQKEKLHSLTYAKDNIIREVESIDKKEVDTPLTQEESNRRLALKADLSELSLKESQFWYQRAKKLWLRE
        M RWWE S+Q+GHPGFSFI+RLKSLAN IKPWQKEK HSLT AK+NIIREV+SIDK E+DTPL+QEESNRRLALKA+LS+LSLKESQFW+QRAKKLWL+E
Subjt:  MGRWWENSIQDGHPGFSFIQRLKSLANFIKPWQKEKLHSLTYAKDNIIREVESIDKKEVDTPLTQEESNRRLALKADLSELSLKESQFWYQRAKKLWLRE

Query:  GDENSSFFHRICSSRQKRSFIHEIQDEVGLIQNTNISISTAFIKFFSRIYRSSTKSDPLFIDNLD
        GDENS+FFHRICSSRQKR+ IHEIQDE G IQNTN +IS AF+  FS IYR STK DPLFI+NL+
Subjt:  GDENSSFFHRICSSRQKRSFIHEIQDEVGLIQNTNISISTAFIKFFSRIYRSSTKSDPLFIDNLD

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G43760.1 DNAse I-like superfamily protein

4.2e-04

24.79

Show/hide

Query:  WENSIQDGHPGFSFIQRLKSLANFIKPWQKEKLHSLTYAKDNIIREVESIDKKEVDTPLTQEESNRRLALKADLSELSLKESQFWYQRAKKLWLREGDEN
        WE  I  G   FS  + LK+     K   ++   ++ +     +  +ESI  + +  P         +A K      +  ES F+ Q+++  WL++GD N
Subjt:  WENSIQDGHPGFSFIQRLKSLANFIKPWQKEKLHSLTYAKDNIIREVESIDKKEVDTPLTQEESNRRLALKADLSELSLKESQFWYQRAKKLWLREGDEN

Query:  SSFFHRICSSRQKRSFI
        + FFH++  + Q ++ I
Subjt:  SSFFHRICSSRQKRSFI

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGGAAGATGGTGGGAAAACTCGATCCAAGATGGTCATCCAGGATTCTCCTTCATCCAAAGGCTAAAGTCTTTAGCAAATTTTATCAAACCTTGGCAAAAGGAGAAATT
ACACTCTCTCACCTATGCTAAAGATAACATTATAAGGGAAGTGGAGTCTATTGACAAAAAGGAAGTGGATACTCCTTTGACTCAAGAGGAAAGTAATCGTCGACTAGCCC
TAAAAGCTGATCTCAGCGAGTTATCTCTCAAGGAGTCCCAATTCTGGTACCAAAGGGCTAAAAAGCTTTGGCTTAGGGAGGGAGATGAAAACTCCTCCTTCTTTCATAGA
ATTTGCTCATCAAGACAAAAGAGAAGTTTTATTCATGAAATCCAGGATGAAGTAGGTTTGATTCAGAATACAAACATCAGTATATCAACTGCTTTTATAAAATTCTTTTC
AAGGATTTATAGAAGCTCTACAAAAAGTGATCCTCTTTTTATCGATAATCTAGATTAG

mRNA sequence

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Protein sequence

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MGRWWENSIQDGHPGFSFIQRLKSLANFIKPWQKEKLHSLTYAKDNIIREVESIDKKEVDTPLTQEESNRRLALKADLSELSLKESQFWYQRAKKLWLREGDENSSFFHR
ICSSRQKRSFIHEIQDEVGLIQNTNISISTAFIKFFSRIYRSSTKSDPLFIDNLD

IVF0004724 (gene) of Melon (IVF77) v1 genome