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IVF0004726 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0004726
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRNA polymerase II transcriptional coactivator KIWI-like
Genome locationchr08:20284661..20301682
RNA-Seq ExpressionIVF0004726
SyntenyIVF0004726
Gene Ontology termsGO:0060261 - positive regulation of transcription initiation from RNA polymerase II promoter (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005667 - transcription factor complex (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003713 - transcription coactivator activity (molecular function)
InterPro domainsIPR003173 - Transcriptional coactivator p15 (PC4), C-terminal
IPR009044 - ssDNA-binding transcriptional regulator
IPR045125 - RNA polymerase II transcriptional coactivator Sub1/Tcp4-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004146395.1 RNA polymerase II transcriptional coactivator KIWI isoform X1 [Cucumis sativus]2.63e-6294.23Show/hide
Query:  MSASGKRKDDEDRVSEGDAPPSKTFRKDPDDADEIVVCELSKNRRVMVRKWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNEN
        MSASGKRK DED VSEGDAPPSKTF+KD DD DEIVVCELSKNRRVMVR WQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNEN
Subjt:  MSASGKRKDDEDRVSEGDAPPSKTFRKDPDDADEIVVCELSKNRRVMVRKWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNEN

Query:  SSGD
        SSGD
Subjt:  SSGD

XP_008442140.1 PREDICTED: RNA polymerase II transcriptional coactivator KIWI isoform X1 [Cucumis melo]1.71e-67100Show/hide
Query:  MSASGKRKDDEDRVSEGDAPPSKTFRKDPDDADEIVVCELSKNRRVMVRKWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNEN
        MSASGKRKDDEDRVSEGDAPPSKTFRKDPDDADEIVVCELSKNRRVMVRKWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNEN
Subjt:  MSASGKRKDDEDRVSEGDAPPSKTFRKDPDDADEIVVCELSKNRRVMVRKWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNEN

Query:  SSGD
        SSGD
Subjt:  SSGD

XP_022932999.1 RNA polymerase II transcriptional coactivator KIWI-like isoform X1 [Cucurbita moschata]1.21e-5888.46Show/hide
Query:  MSASGKRKDDEDRVSEGDAPPSKTFRKDPDDADEIVVCELSKNRRVMVRKWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNEN
        MSA GKRKDDED V EGDAPP KTFRKD D+ DEIVVCE+SKNRRVMVR WQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVL NHV+EIDKAVNEN
Subjt:  MSASGKRKDDEDRVSEGDAPPSKTFRKDPDDADEIVVCELSKNRRVMVRKWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNEN

Query:  SSGD
        S GD
Subjt:  SSGD

XP_023543027.1 RNA polymerase II transcriptional coactivator KIWI-like isoform X2 [Cucurbita pepo subsp. pepo]5.98e-5988.46Show/hide
Query:  MSASGKRKDDEDRVSEGDAPPSKTFRKDPDDADEIVVCELSKNRRVMVRKWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNEN
        MSA GKRK+DED VSEGDAPP KTFRKD D+ DEIVVCE+SKNRRVMVR WQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVL NHV+EIDKAVNEN
Subjt:  MSASGKRKDDEDRVSEGDAPPSKTFRKDPDDADEIVVCELSKNRRVMVRKWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNEN

Query:  SSGD
        S GD
Subjt:  SSGD

XP_038881105.1 RNA polymerase II transcriptional coactivator KIWI-like isoform X1 [Benincasa hispida]1.78e-6090.38Show/hide
Query:  MSASGKRKDDEDRVSEGDAPPSKTFRKDPDDADEIVVCELSKNRRVMVRKWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNEN
        MSA GKRKD+ED  SEGDAPPSKTF+KD DD DEIVVCE+SKNRRVMVR WQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVL NHVEEIDKAVNEN
Subjt:  MSASGKRKDDEDRVSEGDAPPSKTFRKDPDDADEIVVCELSKNRRVMVRKWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNEN

Query:  SSGD
        SSGD
Subjt:  SSGD

TrEMBL top hitse value%identityAlignment
A0A0A0L2F1 PC4 domain-containing protein4.4e-4794.23Show/hide
Query:  MSASGKRKDDEDRVSEGDAPPSKTFRKDPDDADEIVVCELSKNRRVMVRKWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNEN
        MSASGKRK DED VSEGDAPPSKTF+KD DD DEIVVCELSKNRRVMVR WQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNEN
Subjt:  MSASGKRKDDEDRVSEGDAPPSKTFRKDPDDADEIVVCELSKNRRVMVRKWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNEN

Query:  SSGD
        SSGD
Subjt:  SSGD

A0A1S3B4K6 RNA polymerase II transcriptional coactivator KIWI isoform X15.0e-51100Show/hide
Query:  MSASGKRKDDEDRVSEGDAPPSKTFRKDPDDADEIVVCELSKNRRVMVRKWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNEN
        MSASGKRKDDEDRVSEGDAPPSKTFRKDPDDADEIVVCELSKNRRVMVRKWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNEN
Subjt:  MSASGKRKDDEDRVSEGDAPPSKTFRKDPDDADEIVVCELSKNRRVMVRKWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNEN

Query:  SSGD
        SSGD
Subjt:  SSGD

A0A6J1EYI2 RNA polymerase II transcriptional coactivator KIWI-like isoform X12.7e-4488.46Show/hide
Query:  MSASGKRKDDEDRVSEGDAPPSKTFRKDPDDADEIVVCELSKNRRVMVRKWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNEN
        MSA GKRKDDED V EGDAPP KTFRKD D+ DEIVVCE+SKNRRVMVR WQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVL NHV+EIDKAVNEN
Subjt:  MSASGKRKDDEDRVSEGDAPPSKTFRKDPDDADEIVVCELSKNRRVMVRKWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNEN

Query:  SSGD
        S GD
Subjt:  SSGD

A0A6J1HRT2 RNA polymerase II transcriptional coactivator KIWI-like isoform X14.3e-4286.14Show/hide
Query:  MSASGKRKDDEDRVSEGDAPPSKTFRKDPDDADEIVVCELSKNRRVMVRKWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNEN
        MSA GKRKDDED  SEGDAPP KTF+KD ++ DEIVVCE+SKNRRVMVR WQGKIVVDIREFYVKDGK+MPGKKG SLSLDQWNVL NHVEEIDKAVNEN
Subjt:  MSASGKRKDDEDRVSEGDAPPSKTFRKDPDDADEIVVCELSKNRRVMVRKWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNEN

Query:  S
        S
Subjt:  S

A0A6J1IRG1 RNA polymerase II transcriptional coactivator KIWI-like isoform X13.0e-4385.58Show/hide
Query:  MSASGKRKDDEDRVSEGDAPPSKTFRKDPDDADEIVVCELSKNRRVMVRKWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNEN
        MSA GKR+DDED VSEGDAPP KTFRKD D+ DEIVVCE+SKNR+V+VR WQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVL NHV+EIDKAV+EN
Subjt:  MSASGKRKDDEDRVSEGDAPPSKTFRKDPDDADEIVVCELSKNRRVMVRKWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNEN

Query:  SSGD
        S GD
Subjt:  SSGD

SwissProt top hitse value%identityAlignment
O65154 RNA polymerase II transcriptional coactivator KIWI9.8e-2858.88Show/hide
Query:  MSASGKRKDDEDRVSEGDA---PPSKTFRK---DPDDADEIVVCELSKNRRVMVRKWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEID
        MS+ GKRKD++ R S+ ++    P+K   K   D D +D+IVVC +SKNRRV VR W GKI +DIREFYVKDGK +PGKKGISLS+DQWN L NH E+I+
Subjt:  MSASGKRKDDEDRVSEGDA---PPSKTFRK---DPDDADEIVVCELSKNRRVMVRKWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEID

Query:  KAVNENS
        KA+++ S
Subjt:  KAVNENS

O65155 RNA polymerase II transcriptional coactivator KELP5.8e-1240Show/hide
Query:  KDDEDRVSEGDAPPSKTFRKDPDDADEIVVCELSKNRRVMVRKWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNENSS
        K++ED    GD    K   K+ DD  ++++C LS  RRV +++++GK +V IRE+Y KDGK++P  KGISL+ +QW+    ++  I+ AV +  S
Subjt:  KDDEDRVSEGDAPPSKTFRKDPDDADEIVVCELSKNRRVMVRKWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNENSS

P11031 Activated RNA polymerase II transcriptional coactivator p153.5e-0943.55Show/hide
Query:  ELSKNRRVMVRKWQGKIVVDIREFYV-KDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNE
        ++ K R V VR ++GKI++DIRE+++  +G+  PG+KGISL+++QW+ L   + +ID AV +
Subjt:  ELSKNRRVMVRKWQGKIVVDIREFYV-KDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNE

Q63396 Activated RNA polymerase II transcriptional coactivator p153.5e-0943.55Show/hide
Query:  ELSKNRRVMVRKWQGKIVVDIREFYV-KDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNE
        ++ K R V VR ++GKI++DIRE+++  +G+  PG+KGISL+++QW+ L   + +ID AV +
Subjt:  ELSKNRRVMVRKWQGKIVVDIREFYV-KDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNE

Q9VLR5 RNA polymerase II transcriptional coactivator5.4e-1043.48Show/hide
Query:  KDDEDRVSEGDAPPSKTFRKDPDDADE--IVVCELSKNRRVMVRKWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAV
        K    +  E DAP S     DP D+ E       L   R+V + +++G+  VDIREFY K G+ +PGKKGISLSL QW  LL   EE+ +A+
Subjt:  KDDEDRVSEGDAPPSKTFRKDPDDADE--IVVCELSKNRRVMVRKWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAV

Arabidopsis top hitse value%identityAlignment
AT4G10920.1 transcriptional coactivator p15 (PC4) family protein (KELP)4.1e-1340Show/hide
Query:  KDDEDRVSEGDAPPSKTFRKDPDDADEIVVCELSKNRRVMVRKWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNENSS
        K++ED    GD    K   K+ DD  ++++C LS  RRV +++++GK +V IRE+Y KDGK++P  KGISL+ +QW+    ++  I+ AV +  S
Subjt:  KDDEDRVSEGDAPPSKTFRKDPDDADEIVVCELSKNRRVMVRKWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNENSS

AT5G09240.1 ssDNA-binding transcriptional regulator9.1e-2151.38Show/hide
Query:  MSASGKRKDDEDRV------SEGDAPPSKTFRKDPDDADEIVVCELSKNRRVMVRKWQGKIVVDIREFYVKDGKQMP--GKKGISLSLDQWNVLLNHVEE
        MS +GKRKD++ R       SE  APP K   K  D+ ++I +C L KNRRV VR   G+I + IR+F+VKDG  +P   K+GISLSL+QWN L NH E+
Subjt:  MSASGKRKDDEDRV------SEGDAPPSKTFRKDPDDADEIVVCELSKNRRVMVRKWQGKIVVDIREFYVKDGKQMP--GKKGISLSLDQWNVLLNHVEE

Query:  IDKAVNENS
        IDKA++E S
Subjt:  IDKAVNENS

AT5G09240.2 ssDNA-binding transcriptional regulator3.0e-1640.88Show/hide
Query:  MSASGKRKDDEDRV------SEGDAPPSKTFRKDPDDADEIVVCELSKNRRVMVRKWQGKIVVDIREFYVKDGKQMP--GKKGISLSLD-----------
        MS +GKRKD++ R       SE  APP K   K  D+ ++I +C L KNRRV VR   G+I + IR+F+VKDG  +P   K+GISLSL+           
Subjt:  MSASGKRKDDEDRV------SEGDAPPSKTFRKDPDDADEIVVCELSKNRRVMVRKWQGKIVVDIREFYVKDGKQMP--GKKGISLSLD-----------

Query:  -----------------QWNVLLNHVEEIDKAVNENS
                         QWN L NH E+IDKA++E S
Subjt:  -----------------QWNVLLNHVEEIDKAVNENS

AT5G09250.1 ssDNA-binding transcriptional regulator7.0e-2958.88Show/hide
Query:  MSASGKRKDDEDRVSEGDA---PPSKTFRK---DPDDADEIVVCELSKNRRVMVRKWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEID
        MS+ GKRKD++ R S+ ++    P+K   K   D D +D+IVVC +SKNRRV VR W GKI +DIREFYVKDGK +PGKKGISLS+DQWN L NH E+I+
Subjt:  MSASGKRKDDEDRVSEGDA---PPSKTFRK---DPDDADEIVVCELSKNRRVMVRKWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEID

Query:  KAVNENS
        KA+++ S
Subjt:  KAVNENS

AT5G09250.2 ssDNA-binding transcriptional regulator1.5e-1858.02Show/hide
Query:  MSASGKRKDDEDRVSEGDA---PPSKTFRK---DPDDADEIVVCELSKNRRVMVRKWQGKIVVDIREFYVKDGKQMPGKKG
        MS+ GKRKD++ R S+ ++    P+K   K   D D +D+IVVC +SKNRRV VR W GKI +DIREFYVKDGK +PGKKG
Subjt:  MSASGKRKDDEDRVSEGDA---PPSKTFRK---DPDDADEIVVCELSKNRRVMVRKWQGKIVVDIREFYVKDGKQMPGKKG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGCAAGCGGAAAGCGAAAGGACGACGAAGATCGCGTATCCGAAGGAGATGCTCCTCCTTCTAAAACATTCAGGAAAGATCCTGACGATGCCGATGAAATCGTCGT
CTGCGAGCTTTCAAAGAACCGTAGGGTTATGGTCAGGAAATGGCAAGGAAAGATTGTCGTCGATATTCGCGAGTTTTATGTCAAAGATGGCAAGCAGATGCCTGGAAAGA
AAGGTATCTCGCTATCCTTGGATCAGTGGAACGTTCTCCTAAATCATGTAGAAGAAATTGACAAGGCTGTTAATGAGAACTCGTCAGGAGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTGCAAGCGGAAAGCGAAAGGACGACGAAGATCGCGTATCCGAAGGAGATGCTCCTCCTTCTAAAACATTCAGGAAAGATCCTGACGATGCCGATGAAATCGTCGT
CTGCGAGCTTTCAAAGAACCGTAGGGTTATGGTCAGGAAATGGCAAGGAAAGATTGTCGTCGATATTCGCGAGTTTTATGTCAAAGATGGCAAGCAGATGCCTGGAAAGA
AAGGTATCTCGCTATCCTTGGATCAGTGGAACGTTCTCCTAAATCATGTAGAAGAAATTGACAAGGCTGTTAATGAGAACTCGTCAGGAGATTAA
Protein sequenceShow/hide protein sequence
MSASGKRKDDEDRVSEGDAPPSKTFRKDPDDADEIVVCELSKNRRVMVRKWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNENSSGD