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IVF0004743 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0004743
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon 17.6
Genome locationchr01:24385107..24385409
RNA-Seq ExpressionIVF0004743
SyntenyIVF0004743
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047845.1 hypothetical protein E6C27_scaffold133G001090 [Cucumis melo var. makuwa]1.60e-1266Show/hide
Query:  QNNQNNFAHKNAQEQNPAYLTHDLNRPIRSYASPNLYDFNPKIAYPEFGE
        QNN+    ++NAQEQNP YL H +++PIRSYAS NLYDFNP I YP FGE
Subjt:  QNNQNNFAHKNAQEQNPAYLTHDLNRPIRSYASPNLYDFNPKIAYPEFGE

KAA0051815.1 hypothetical protein E6C27_scaffold60G002300 [Cucumis melo var. makuwa]5.47e-3060.82Show/hide
Query:  NNQNNFAHKNAQEQNPAYLTHDLNRPIRSYASPNLYDFNPKIAYPEFGEITRFKIKTITPNDTK-CEKIRRTPMRGPHDHICNFYSTCASFNMQRIS
        NNQNN A++N QEQNPAYL HDL++PI+SYASPNLYDFNP IAY  FGE   F+IK +    T+   +    P   P+DHI NFY  CASFNM RIS
Subjt:  NNQNNFAHKNAQEQNPAYLTHDLNRPIRSYASPNLYDFNPKIAYPEFGEITRFKIKTITPNDTK-CEKIRRTPMRGPHDHICNFYSTCASFNMQRIS

KAA0062403.1 putative disease resistance RPP13-like protein 1 [Cucumis melo var. makuwa]8.24e-2958.42Show/hide
Query:  MNDQNNQNNFAHKNAQEQNPAYLTHDLNRPIRSYASPNLYDFNPKIAYPEFGEITRFKIKTITPNDTK-CEKIRRTPMRGPHDHICNFYSTCASFNMQRI
        MN+QNNQ   A++ AQ  NP YL  D +RPIRSYASPNLYDFNP IAYP F E TRF+IK +     +   + RR P + PHD+I NFYS CASF+M  I
Subjt:  MNDQNNQNNFAHKNAQEQNPAYLTHDLNRPIRSYASPNLYDFNPKIAYPEFGEITRFKIKTITPNDTK-CEKIRRTPMRGPHDHICNFYSTCASFNMQRI

Query:  S
        S
Subjt:  S

KAA0064228.1 hypothetical protein E6C27_scaffold548G001790 [Cucumis melo var. makuwa]9.15e-1248Show/hide
Query:  PAYLTHDLNRPIRSYASPNLYDFNPKIAYPEFGEITRFKIKTITPNDTKCEKIRRTPM-RGPHDHICNFYSTCAS
        PAYL HDL+R IRSY S N YDFNP IAYP  GE  RF+IK + P     + +    M R  ++ I    S  AS
Subjt:  PAYLTHDLNRPIRSYASPNLYDFNPKIAYPEFGEITRFKIKTITPNDTKCEKIRRTPM-RGPHDHICNFYSTCAS

TYK02149.1 putative disease resistance RPP13-like protein 1 [Cucumis melo var. makuwa]6.13e-1342.42Show/hide
Query:  NQNNFAHKNAQEQNPAYLT---HDLNRPIRSYASPNLYDFNPKIAYPEFGEITRFKIKTITPNDT-KCEKIRRTPMRGPHDHICNFYSTCASFNMQRIS
        N+NN    N+  Q    LT   H+L+ PIR+Y S NLYDFN  IAY  FGE   F++K +      K  +        PH+HI +FYS CASF+M   S
Subjt:  NQNNFAHKNAQEQNPAYLT---HDLNRPIRSYASPNLYDFNPKIAYPEFGEITRFKIKTITPNDT-KCEKIRRTPMRGPHDHICNFYSTCASFNMQRIS

TrEMBL top hitse value%identityAlignment
A0A5A7U2F0 Uncharacterized protein4.6e-0962.26Show/hide
Query:  MNDQNNQNNFAHKNAQEQNPAYLTHDLNRPIRSYASPNLYDFNPKIAYPEFGE
        + +QNN+    ++NAQEQNP YL H +++PIRSYAS NLYDFNP I YP FGE
Subjt:  MNDQNNQNNFAHKNAQEQNPAYLTHDLNRPIRSYASPNLYDFNPKIAYPEFGE

A0A5A7UDN8 Uncharacterized protein1.1e-2160.82Show/hide
Query:  NNQNNFAHKNAQEQNPAYLTHDLNRPIRSYASPNLYDFNPKIAYPEFGEITRFKIKTITPNDTK-CEKIRRTPMRGPHDHICNFYSTCASFNMQRIS
        NNQNN A++N QEQNPAYL HDL++PI+SYASPNLYDFNP IAY  FGE   F+IK +    T+   +    P   P+DHI NFY  CASFNM RIS
Subjt:  NNQNNFAHKNAQEQNPAYLTHDLNRPIRSYASPNLYDFNPKIAYPEFGEITRFKIKTITPNDTK-CEKIRRTPMRGPHDHICNFYSTCASFNMQRIS

A0A5A7UFP5 Uncharacterized protein3.9e-0873.33Show/hide
Query:  NNQNNFAHKNAQEQNPAYLTHDLNRPIRSYASPNLYDFNPKIAYP
        NNQNN AH+NA+EQN  YL HDL++PIRSYASPNLYDFN  I  P
Subjt:  NNQNNFAHKNAQEQNPAYLTHDLNRPIRSYASPNLYDFNPKIAYP

A0A5A7V2U7 Putative disease resistance RPP13-like protein 14.0e-2158.42Show/hide
Query:  MNDQNNQNNFAHKNAQEQNPAYLTHDLNRPIRSYASPNLYDFNPKIAYPEFGEITRFKIKTITPNDTK-CEKIRRTPMRGPHDHICNFYSTCASFNMQRI
        MN+QNNQ   A++ AQ  NP YL  D +RPIRSYASPNLYDFNP IAYP F E TRF+IK +     +   + RR P + PHD+I NFYS CASF+M  I
Subjt:  MNDQNNQNNFAHKNAQEQNPAYLTHDLNRPIRSYASPNLYDFNPKIAYPEFGEITRFKIKTITPNDTK-CEKIRRTPMRGPHDHICNFYSTCASFNMQRI

Query:  S
        S
Subjt:  S

A0A5D3BVN1 Putative disease resistance RPP13-like protein 11.3e-0842Show/hide
Query:  NNQNNFAHKNAQEQNPAYLT---HDLNRPIRSYASPNLYDFNPKIAYPEFGEITRFKIKTI-TPNDTKCEKIRRTPMRGPHDHICNFYSTCASFNMQRIS
        +N+NN    N+  Q    LT   H+L+ PIR+Y S NLYDFN  IAY  FGE   F++K +      K  +        PH+HI +FYS CASF+M   S
Subjt:  NNQNNFAHKNAQEQNPAYLT---HDLNRPIRSYASPNLYDFNPKIAYPEFGEITRFKIKTI-TPNDTKCEKIRRTPMRGPHDHICNFYSTCASFNMQRIS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATGACCAGAACAATCAGAACAACTTTGCCCACAAAAATGCACAAGAACAAAATCCTGCCTACTTGACTCATGATCTAAACAGACCTATACGGTCGTACGCCTCACC
AAATCTATATGATTTTAATCCCAAGATTGCCTACCCAGAGTTTGGCGAGATTACTCGGTTTAAAATCAAGACTATTACTCCAAATGATACAAAATGTGAGAAAATTCGGA
GGACACCCATGCGAGGTCCACATGATCATATTTGTAACTTTTACTCTACATGTGCCTCTTTTAACATGCAAAGAATATCGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAATGACCAGAACAATCAGAACAACTTTGCCCACAAAAATGCACAAGAACAAAATCCTGCCTACTTGACTCATGATCTAAACAGACCTATACGGTCGTACGCCTCACC
AAATCTATATGATTTTAATCCCAAGATTGCCTACCCAGAGTTTGGCGAGATTACTCGGTTTAAAATCAAGACTATTACTCCAAATGATACAAAATGTGAGAAAATTCGGA
GGACACCCATGCGAGGTCCACATGATCATATTTGTAACTTTTACTCTACATGTGCCTCTTTTAACATGCAAAGAATATCGTAA
Protein sequenceShow/hide protein sequence
MNDQNNQNNFAHKNAQEQNPAYLTHDLNRPIRSYASPNLYDFNPKIAYPEFGEITRFKIKTITPNDTKCEKIRRTPMRGPHDHICNFYSTCASFNMQRIS