; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0004750 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0004750
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description39S ribosomal protein L47, mitochondrial
Genome locationchr02:22023434..22026666
RNA-Seq ExpressionIVF0004750
SyntenyIVF0004750
Gene Ontology termsGO:0032543 - mitochondrial translation (biological process)
GO:0005762 - mitochondrial large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001854 - Ribosomal protein L29/L35
IPR010729 - Ribosomal protein L47, mitochondrial
IPR036049 - Ribosomal protein L29/L35 superfamily
IPR038340 - MRP-L47 superfamily, mitochondrial


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004138121.1 39S ribosomal protein L47, mitochondrial [Cucumis sativus]3.10e-9398.6Show/hide
Query:  MFLTRVFGRTFLAAARSETSSATAAAAATARTGYNPLEEFFEADRSPDDGKPVVYGRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRF
        MFLTRVFGRTFLAAARSETSSATAAAAATARTGYNPLEEFFEADRSPDDGKPVVYGRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNL+F
Subjt:  MFLTRVFGRTFLAAARSETSSATAAAAATARTGYNPLEEFFEADRSPDDGKPVVYGRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRF

Query:  PNPERISKVRKSMCRIKHVLTERAIDEPDPRRSAEMKRMINAL
        PNPERI KVRKSMCRIKHVLTERAIDEPDPRRSAEMKRMINAL
Subjt:  PNPERISKVRKSMCRIKHVLTERAIDEPDPRRSAEMKRMINAL

XP_008453113.1 PREDICTED: 39S ribosomal protein L47, mitochondrial [Cucumis melo]1.87e-94100Show/hide
Query:  MFLTRVFGRTFLAAARSETSSATAAAAATARTGYNPLEEFFEADRSPDDGKPVVYGRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRF
        MFLTRVFGRTFLAAARSETSSATAAAAATARTGYNPLEEFFEADRSPDDGKPVVYGRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRF
Subjt:  MFLTRVFGRTFLAAARSETSSATAAAAATARTGYNPLEEFFEADRSPDDGKPVVYGRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRF

Query:  PNPERISKVRKSMCRIKHVLTERAIDEPDPRRSAEMKRMINAL
        PNPERISKVRKSMCRIKHVLTERAIDEPDPRRSAEMKRMINAL
Subjt:  PNPERISKVRKSMCRIKHVLTERAIDEPDPRRSAEMKRMINAL

XP_022968794.1 39S ribosomal protein L47, mitochondrial-like [Cucurbita maxima]2.26e-8691.61Show/hide
Query:  MFLTRVFGRTFLAAARSETSSATAAAAATARTGYNPLEEFFEADRSPDDGKPVVYGRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRF
        M LTR+FGRTFLAAARSETS+ATAAA +TARTGYNPLEEFFEA RSPDD KPVVYGRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRF
Subjt:  MFLTRVFGRTFLAAARSETSSATAAAAATARTGYNPLEEFFEADRSPDDGKPVVYGRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRF

Query:  PNPERISKVRKSMCRIKHVLTERAIDEPDPRRSAEMKRMINAL
        PNPERI KVRKSMCRIK VLTERAIDEPDPRR AE+KRM+NAL
Subjt:  PNPERISKVRKSMCRIKHVLTERAIDEPDPRRSAEMKRMINAL

XP_023530690.1 39S ribosomal protein L47, mitochondrial-like [Cucurbita pepo subsp. pepo]1.59e-8691.61Show/hide
Query:  MFLTRVFGRTFLAAARSETSSATAAAAATARTGYNPLEEFFEADRSPDDGKPVVYGRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRF
        MFLTR+FGRTFLAAARSE S+ATAAA +TARTGYNPLEEFFE  RSP+D KPVVYGRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRF
Subjt:  MFLTRVFGRTFLAAARSETSSATAAAAATARTGYNPLEEFFEADRSPDDGKPVVYGRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRF

Query:  PNPERISKVRKSMCRIKHVLTERAIDEPDPRRSAEMKRMINAL
        PNPERI KVRKSMCRIK VLTERAIDEPDPRRSAEMKRM+NAL
Subjt:  PNPERISKVRKSMCRIKHVLTERAIDEPDPRRSAEMKRMINAL

XP_038879389.1 39S ribosomal protein L47, mitochondrial [Benincasa hispida]7.02e-9096.5Show/hide
Query:  MFLTRVFGRTFLAAARSETSSATAAAAATARTGYNPLEEFFEADRSPDDGKPVVYGRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRF
        MFLTRVFGRTFLAAARSETSSAT AAAATAR GYNPLEEFFEADRSPDD KPVVYGRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRF
Subjt:  MFLTRVFGRTFLAAARSETSSATAAAAATARTGYNPLEEFFEADRSPDDGKPVVYGRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRF

Query:  PNPERISKVRKSMCRIKHVLTERAIDEPDPRRSAEMKRMINAL
        PNPERI KVRKSMCRIK VLTERAIDEPDPRRSAEMKRMINAL
Subjt:  PNPERISKVRKSMCRIKHVLTERAIDEPDPRRSAEMKRMINAL

TrEMBL top hitse value%identityAlignment
A0A0A0LS48 Uncharacterized protein4.6e-7198.6Show/hide
Query:  MFLTRVFGRTFLAAARSETSSATAAAAATARTGYNPLEEFFEADRSPDDGKPVVYGRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRF
        MFLTRVFGRTFLAAARSETSSATAAAAATARTGYNPLEEFFEADRSPDDGKPVVYGRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNL+F
Subjt:  MFLTRVFGRTFLAAARSETSSATAAAAATARTGYNPLEEFFEADRSPDDGKPVVYGRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRF

Query:  PNPERISKVRKSMCRIKHVLTERAIDEPDPRRSAEMKRMINAL
        PNPERI KVRKSMCRIKHVLTERAIDEPDPRRSAEMKRMINAL
Subjt:  PNPERISKVRKSMCRIKHVLTERAIDEPDPRRSAEMKRMINAL

A0A1S3BWK4 39S ribosomal protein L47, mitochondrial5.4e-72100Show/hide
Query:  MFLTRVFGRTFLAAARSETSSATAAAAATARTGYNPLEEFFEADRSPDDGKPVVYGRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRF
        MFLTRVFGRTFLAAARSETSSATAAAAATARTGYNPLEEFFEADRSPDDGKPVVYGRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRF
Subjt:  MFLTRVFGRTFLAAARSETSSATAAAAATARTGYNPLEEFFEADRSPDDGKPVVYGRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRF

Query:  PNPERISKVRKSMCRIKHVLTERAIDEPDPRRSAEMKRMINAL
        PNPERISKVRKSMCRIKHVLTERAIDEPDPRRSAEMKRMINAL
Subjt:  PNPERISKVRKSMCRIKHVLTERAIDEPDPRRSAEMKRMINAL

A0A6J1C2P6 39S ribosomal protein L47, mitochondrial4.2e-6493.01Show/hide
Query:  MFLTRVFGRTFLAAARSETSSATAAAAATARTGYNPLEEFFEADRSPDDGKPVVYGRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRF
        MFLTRVFGRT LAAARSETSSA AAAA+T RTGYNPLEEFFEADRSPDD KPVVYGRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQML+AQNLRF
Subjt:  MFLTRVFGRTFLAAARSETSSATAAAAATARTGYNPLEEFFEADRSPDDGKPVVYGRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRF

Query:  PNPERISKVRKSMCRIKHVLTERAIDEPDPRRSAEMKRMINAL
         NPERI KVRKSMCRIK VLTERAI+EPDPRRSAEMKRMINAL
Subjt:  PNPERISKVRKSMCRIKHVLTERAIDEPDPRRSAEMKRMINAL

A0A6J1I0P6 39S ribosomal protein L47, mitochondrial-like7.6e-6691.61Show/hide
Query:  MFLTRVFGRTFLAAARSETSSATAAAAATARTGYNPLEEFFEADRSPDDGKPVVYGRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRF
        M LTR+FGRTFLAAARSETS+ATAAA +TARTGYNPLEEFFEA RSPDD KPVVYGRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRF
Subjt:  MFLTRVFGRTFLAAARSETSSATAAAAATARTGYNPLEEFFEADRSPDDGKPVVYGRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRF

Query:  PNPERISKVRKSMCRIKHVLTERAIDEPDPRRSAEMKRMINAL
        PNPERI KVRKSMCRIK VLTERAIDEPDPRR AE+KRM+NAL
Subjt:  PNPERISKVRKSMCRIKHVLTERAIDEPDPRRSAEMKRMINAL

A0A6J1JCZ2 39S ribosomal protein L47, mitochondrial2.9e-6593.71Show/hide
Query:  MFLTRVFGRTFLAAARSETSSATAAAAATARTGYNPLEEFFEADRSPDDGKPVVYGRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRF
        MFLTRV GR FLAAARSETSSA AAAA+TA TGYNPLEEFFEADRSPDD KPVVYGRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRF
Subjt:  MFLTRVFGRTFLAAARSETSSATAAAAATARTGYNPLEEFFEADRSPDDGKPVVYGRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRF

Query:  PNPERISKVRKSMCRIKHVLTERAIDEPDPRRSAEMKRMINAL
        PNPERI KVRKSMCRIK VLTERAIDEPDPRRSAEMKRM+NAL
Subjt:  PNPERISKVRKSMCRIKHVLTERAIDEPDPRRSAEMKRMINAL

SwissProt top hitse value%identityAlignment
P87232 54S ribosomal protein L4, mitochondrial3.0e-1143.48Show/hide
Query:  NPLEEFFEADRS-PDDGKPVVYGRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRFP--NPERISKVRKSMCRIKHVLTER
        +PL  FF   ++ P   +   +GR+W A ELR KS++DL+ LWY  L+EKN+L TQR  +    L  P  + ER+  V K+M  IK VL ER
Subjt:  NPLEEFFEADRS-PDDGKPVVYGRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRFP--NPERISKVRKSMCRIKHVLTER

Q08DT6 39S ribosomal protein L47, mitochondrial2.5e-1349.43Show/hide
Query:  LEEFFEADRSPDDGKPVVYGRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRFPNPERISKVRKSMCRIKHVLTER
        LEEFF+  ++  + K V  G SW   +LR KS +DL+KLWYVLLKE+NML+T  Q    Q L  P+PER+ KV  SM  +  V+ ER
Subjt:  LEEFFEADRSPDDGKPVVYGRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRFPNPERISKVRKSMCRIKHVLTER

Q2H080 54S ribosomal protein L4, mitochondrial8.0e-1243.27Show/hide
Query:  LEEFFEADRSPDDGKPVV--YGRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRFPNP---ERISKVRKSMCRIKHVLTERAIDEPDPR
        L EFF+      +  P +  +GRSW A ELR KSWDDL++LW+V  KE+N + T     N   L F      ER + VR++M  IKHVLTER     D  
Subjt:  LEEFFEADRSPDDGKPVV--YGRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRFPNP---ERISKVRKSMCRIKHVLTERAIDEPDPR

Query:  RSAE
        + AE
Subjt:  RSAE

Q8K2Y7 39S ribosomal protein L47, mitochondrial1.5e-1349.43Show/hide
Query:  LEEFFEADRSPDDGKPVVYGRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRFPNPERISKVRKSMCRIKHVLTER
        LEEFF+  ++  + K V  G SW   +LR KS +DL+KLWYVLLKE+NML+T  Q    Q L  P+PER+ KV  SM  +  V+ ER
Subjt:  LEEFFEADRSPDDGKPVVYGRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRFPNPERISKVRKSMCRIKHVLTER

Q9HD33 39S ribosomal protein L47, mitochondrial9.4e-1348.28Show/hide
Query:  LEEFFEADRSPDDGKPVVYGRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRFPNPERISKVRKSMCRIKHVLTER
        LEEFF+  ++    K V  G +W   +LR KS +DL+KLWYVLLKE+NML+T  Q    Q L  P+PER+ KV  SM  +  V+ ER
Subjt:  LEEFFEADRSPDDGKPVVYGRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRFPNPERISKVRKSMCRIKHVLTER

Arabidopsis top hitse value%identityAlignment
AT1G07830.1 ribosomal protein L29 family protein4.4e-5879.86Show/hide
Query:  MFLTRVFGRTFLAAARSETSSATAAAAA-TARTGYNPLEEFFEADRSPDDGKPVVYGRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLR
        MFLTR  GR FLAAA + + S TAAAAA T RT  NPLEEFFE DRS D+ KPVVYGR WKASELRLKSWDDL KLWYVLLKEKNMLMTQRQML AQN++
Subjt:  MFLTRVFGRTFLAAARSETSSATAAAAA-TARTGYNPLEEFFEADRSPDDGKPVVYGRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLR

Query:  FPNPERISKVRKSMCRIKHVLTERAIDEPDPRRSAEMKRMINAL
        FPNPERI KVR+SMCRIKHVLTERAI+EPD RRSAEMKRM+N +
Subjt:  FPNPERISKVRKSMCRIKHVLTERAIDEPDPRRSAEMKRMINAL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTTTGACACGAGTGTTTGGGAGAACATTTCTAGCTGCTGCTAGATCAGAAACTTCTTCTGCCACAGCTGCTGCTGCTGCTACAGCTAGGACGGGCTATAACCCGCT
TGAGGAGTTTTTTGAGGCAGATAGAAGTCCAGATGATGGCAAACCTGTTGTATATGGTCGAAGTTGGAAGGCTTCAGAACTACGGCTCAAATCTTGGGACGATCTTAATA
AACTATGGTATGTCCTTTTGAAGGAGAAGAATATGTTGATGACACAGCGCCAGATGCTGAATGCACAAAATCTAAGGTTCCCTAATCCAGAACGCATTTCCAAGGTAAGG
AAGTCAATGTGTCGAATCAAGCATGTACTTACCGAGAGAGCCATCGACGAACCAGATCCTCGGAGATCTGCAGAGATGAAGAGGATGATAAATGCTCTGTGA
mRNA sequenceShow/hide mRNA sequence
CGGCGTCTCACCCTCAGGTCTCAAGTCCCTCACGCTTCGTCGTCGCCACTGCTTACTCGCTCGCCGCGGGAGCCCAGATCGTTGCCACTTGGCGGAGACAAGCCTTCTTC
GAGCTTACCTGCTCCTTCTGTGTTCACTCCGTCGTTCAGTAGTACGACCACGACCTGCAGAATTAGAGCATTGGTGCAGCCATGTTTTTGACACGAGTGTTTGGGAGAAC
ATTTCTAGCTGCTGCTAGATCAGAAACTTCTTCTGCCACAGCTGCTGCTGCTGCTACAGCTAGGACGGGCTATAACCCGCTTGAGGAGTTTTTTGAGGCAGATAGAAGTC
CAGATGATGGCAAACCTGTTGTATATGGTCGAAGTTGGAAGGCTTCAGAACTACGGCTCAAATCTTGGGACGATCTTAATAAACTATGGTATGTCCTTTTGAAGGAGAAG
AATATGTTGATGACACAGCGCCAGATGCTGAATGCACAAAATCTAAGGTTCCCTAATCCAGAACGCATTTCCAAGGTAAGGAAGTCAATGTGTCGAATCAAGCATGTACT
TACCGAGAGAGCCATCGACGAACCAGATCCTCGGAGATCTGCAGAGATGAAGAGGATGATAAATGCTCTGTGATAACCGCAAGTGTTTCAAAATCAGTCTAGTATGCCTT
AGATCTTGTCATCTCAGAGACCAAAGGATAAAGAGTTAGCGAGATAATGCACGTCTAATGCAAAGTCATTTCAAATTCATTCTGTAATCGAAGATCTCGTTAGAACCCTA
GAAACTGTTTTGATGATTTCTAATCTTGTTTTTATCTTTACACTAATCAAAAGTTTGAAGATTGTGTTTATTTGTGCCAAAATAAAAAGACATTGGCCAAGTTTATTCTT
ACACACGTGTGTATGTGTGTGGAACAAGTTGAAAATGAAAAAGTTGAC
Protein sequenceShow/hide protein sequence
MFLTRVFGRTFLAAARSETSSATAAAAATARTGYNPLEEFFEADRSPDDGKPVVYGRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRFPNPERISKVR
KSMCRIKHVLTERAIDEPDPRRSAEMKRMINAL