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IVF0004755 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0004755
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotran_gag_3 domain-containing protein
Genome locationchr09:8943572..8943920
RNA-Seq ExpressionIVF0004755
SyntenyIVF0004755
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051728.1 uncharacterized protein E6C27_scaffold60G001140 [Cucumis melo var. makuwa]7.04e-3056.03Show/hide
Query:  MVDLNSSDETLIPNLSSSPNLDVLATPNMNSPNTSTHASLKIFHNSFETYLNPYFFHHNDNTNLVLDTELLTEENH--------------NKMGFINNTF
        M DLN SDETLIP+ SSS N +VL T  MNSPNT THA  +I HN  ETYLNPYF HHNDNT+LVL  ELL EEN+              NK+  ++ T 
Subjt:  MVDLNSSDETLIPNLSSSPNLDVLATPNMNSPNTSTHASLKIFHNSFETYLNPYFFHHNDNTNLVLDTELLTEENH--------------NKMGFINNTF

Query:  PQPSTHVLLAWIHNIT
        P+P + +LLAWI N T
Subjt:  PQPSTHVLLAWIHNIT

XP_022154608.1 uncharacterized protein LOC111021831 [Momordica charantia]5.27e-0841.67Show/hide
Query:  SPNTSTHASLKIFHNSFETYLNPYFFHHNDNTNLVLDTELLTEENH--------------NKMGFINNTFPQPSTHVLLAWIHN
        SPN+S+  S        ++ LNPY+ HH DNT LVL T+ LTEEN+              NK+GFI+ +  +P   +L AWIHN
Subjt:  SPNTSTHASLKIFHNSFETYLNPYFFHHNDNTNLVLDTELLTEENH--------------NKMGFINNTFPQPSTHVLLAWIHN

XP_031736904.1 uncharacterized protein LOC105434586 isoform X1 [Cucumis sativus]1.69e-1044.32Show/hide
Query:  PNMNSPNTSTHASLKIFHNSFETYLNPYFFHHNDNTNLVLDTELLTEENH--------------NKMGFINNTFPQPSTHVLLAWIHN
        PN N  +TS   S     +  + YLNPYF HHNDNTNLVL TE LTEEN+              NK+GF++ T  +P+  +L  WI N
Subjt:  PNMNSPNTSTHASLKIFHNSFETYLNPYFFHHNDNTNLVLDTELLTEENH--------------NKMGFINNTFPQPSTHVLLAWIHN

XP_031736905.1 uncharacterized protein LOC105434586 isoform X2 [Cucumis sativus]1.50e-1044.32Show/hide
Query:  PNMNSPNTSTHASLKIFHNSFETYLNPYFFHHNDNTNLVLDTELLTEENH--------------NKMGFINNTFPQPSTHVLLAWIHN
        PN N  +TS   S     +  + YLNPYF HHNDNTNLVL TE LTEEN+              NK+GF++ T  +P+  +L  WI N
Subjt:  PNMNSPNTSTHASLKIFHNSFETYLNPYFFHHNDNTNLVLDTELLTEENH--------------NKMGFINNTFPQPSTHVLLAWIHN

XP_031736906.1 uncharacterized protein LOC105434586 isoform X3 [Cucumis sativus]1.49e-1044.32Show/hide
Query:  PNMNSPNTSTHASLKIFHNSFETYLNPYFFHHNDNTNLVLDTELLTEENH--------------NKMGFINNTFPQPSTHVLLAWIHN
        PN N  +TS   S     +  + YLNPYF HHNDNTNLVL TE LTEEN+              NK+GF++ T  +P+  +L  WI N
Subjt:  PNMNSPNTSTHASLKIFHNSFETYLNPYFFHHNDNTNLVLDTELLTEENH--------------NKMGFINNTFPQPSTHVLLAWIHN

TrEMBL top hitse value%identityAlignment
A0A5D3CMC2 Retrotran_gag_3 domain-containing protein2.8e-2256.03Show/hide
Query:  MVDLNSSDETLIPNLSSSPNLDVLATPNMNSPNTSTHASLKIFHNSFETYLNPYFFHHNDNTNLVLDTELLTEENH--------------NKMGFINNTF
        M DLN SDETLIP+ SSS N +VL T  MNSPNT THA  +I HN  ETYLNPYF HHNDNT+LVL  ELL EEN+              NK+  ++ T 
Subjt:  MVDLNSSDETLIPNLSSSPNLDVLATPNMNSPNTSTHASLKIFHNSFETYLNPYFFHHNDNTNLVLDTELLTEENH--------------NKMGFINNTF

Query:  PQPSTHVLLAWIHNIT
        P+P + +LLAWI N T
Subjt:  PQPSTHVLLAWIHNIT

A0A6J1DKR8 uncharacterized protein LOC1110218313.7e-0641.18Show/hide
Query:  NSPNTSTHASLKIFHNSFETYLNPYFFHHNDNTNLVLDTELLTEENH--------------NKMGFINNTFPQPSTHVLLAWIHN
        +SPN+S+  S        ++ LNPY+ HH DNT LVL T+ LTEEN+              NK+GFI+ +  +P   +L AWIHN
Subjt:  NSPNTSTHASLKIFHNSFETYLNPYFFHHNDNTNLVLDTELLTEENH--------------NKMGFINNTFPQPSTHVLLAWIHN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCGACCTTAATTCTTCAGATGAAACCCTCATTCCCAACCTAAGTTCTTCACCCAATCTTGATGTTCTTGCTACTCCCAACATGAACTCACCAAACACATCAACCCA
TGCCTCGTTGAAAATTTTCCACAACTCGTTTGAAACATATCTCAACCCTTATTTCTTTCACCACAACGACAATACCAACCTAGTTCTTGACACTGAACTTCTCACAGAAG
AAAACCATAATAAAATGGGTTTCATCAACAACACCTTCCCTCAACCTTCCACCCATGTGCTTCTTGCATGGATTCACAATATAACATAG
mRNA sequenceShow/hide mRNA sequence
ATGGTCGACCTTAATTCTTCAGATGAAACCCTCATTCCCAACCTAAGTTCTTCACCCAATCTTGATGTTCTTGCTACTCCCAACATGAACTCACCAAACACATCAACCCA
TGCCTCGTTGAAAATTTTCCACAACTCGTTTGAAACATATCTCAACCCTTATTTCTTTCACCACAACGACAATACCAACCTAGTTCTTGACACTGAACTTCTCACAGAAG
AAAACCATAATAAAATGGGTTTCATCAACAACACCTTCCCTCAACCTTCCACCCATGTGCTTCTTGCATGGATTCACAATATAACATAG
Protein sequenceShow/hide protein sequence
MVDLNSSDETLIPNLSSSPNLDVLATPNMNSPNTSTHASLKIFHNSFETYLNPYFFHHNDNTNLVLDTELLTEENHNKMGFINNTFPQPSTHVLLAWIHNIT