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IVF0004823 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0004823
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr01:15769451..15769726
RNA-Seq ExpressionIVF0004823
SyntenyIVF0004823
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032819.1 retrotransposon protein [Cucumis melo var. makuwa]5.34e-2459.55Show/hide
Query:  AKDLLNKSFPYYDELAYVFEKDKATGRFAETFVDVESNEPVG------------------QGIDMSQDDVRTSRPARTLDGRPRSSGSK
         K LLNK FPY+D+L YVF++DKATGRFAETFVDV SNEP G                  QGID+SQDD+R SRP+R L+GR  SSGSK
Subjt:  AKDLLNKSFPYYDELAYVFEKDKATGRFAETFVDVESNEPVG------------------QGIDMSQDDVRTSRPARTLDGRPRSSGSK

KAA0036695.1 retrotransposon protein [Cucumis melo var. makuwa]5.32e-2460Show/hide
Query:  AKDLLNKSFPYYDELAYVFEKDKATGRFAETFVDVESNEPVG-------------------QGIDMSQDDVRTSRPARTLDGRPRSSGSK
        AK LLNK FPYYDEL YVF +D+ATGRF ETF DV SNEP G                   QGID+SQDDVR SRP+R L+GR  SSGSK
Subjt:  AKDLLNKSFPYYDELAYVFEKDKATGRFAETFVDVESNEPVG-------------------QGIDMSQDDVRTSRPARTLDGRPRSSGSK

KAA0049673.1 retrotransposon protein [Cucumis melo var. makuwa]1.31e-2976.25Show/hide
Query:  MAKDLLNKSFPYYDELAYVFEKDKATGRFAETFVDVESNEPVG-------------------QGIDMSQDDVRTSRPART
        MAKDLLNKSFPYYDELAYVFEKDKATGRFAETFVDVESNEPVG                   QGIDMSQDDVRTSRPART
Subjt:  MAKDLLNKSFPYYDELAYVFEKDKATGRFAETFVDVESNEPVG-------------------QGIDMSQDDVRTSRPART

TYK21946.1 retrotransposon protein [Cucumis melo var. makuwa]1.33e-2460Show/hide
Query:  AKDLLNKSFPYYDELAYVFEKDKATGRFAETFVDVESNEPVG-------------------QGIDMSQDDVRTSRPARTLDGRPRSSGSK
        AK LLNKSFPYYDEL YVF +D+ATGRFAETF DV SNEP G                   QG+D+SQDDVR SRP+R  +GR  SSGSK
Subjt:  AKDLLNKSFPYYDELAYVFEKDKATGRFAETFVDVESNEPVG-------------------QGIDMSQDDVRTSRPARTLDGRPRSSGSK

TYK30971.1 retrotransposon protein [Cucumis melo var. makuwa]1.88e-2461.11Show/hide
Query:  AKDLLNKSFPYYDELAYVFEKDKATGRFAETFVDVESNEPVG-------------------QGIDMSQDDVRTSRPARTLDGRPRSSGSK
        AK LLNKSFPYYDEL YVF  D+ATGRFAETF DV SNEP G                   QG+D+SQDDVR SRP+R  +GR RSSGSK
Subjt:  AKDLLNKSFPYYDELAYVFEKDKATGRFAETFVDVESNEPVG-------------------QGIDMSQDDVRTSRPARTLDGRPRSSGSK

TrEMBL top hitse value%identityAlignment
A0A5A7SI64 Retrotransposon protein3.9e-1861.11Show/hide
Query:  AKDLLNKSFPYYDELAYVFEKDKATGRFAETFVDVESNEPVG-------------------QGIDMSQDDVRTSRPARTLDGRPRSSGSK
        AK LLNK FPYYDEL YVF +D+ATGRFAETF DV SNEP G                   QGID+SQDDVR SRP+R  +GR RSSGSK
Subjt:  AKDLLNKSFPYYDELAYVFEKDKATGRFAETFVDVESNEPVG-------------------QGIDMSQDDVRTSRPARTLDGRPRSSGSK

A0A5A7SYB2 Retrotransposon protein3.9e-1861.11Show/hide
Query:  AKDLLNKSFPYYDELAYVFEKDKATGRFAETFVDVESNEPVG-------------------QGIDMSQDDVRTSRPARTLDGRPRSSGSK
        AK LLNKSFPYYDEL YVF  D+ATGRFAETF DV SNEP G                   QG+D+SQDDVR SRP+R  +GR RSSGSK
Subjt:  AKDLLNKSFPYYDELAYVFEKDKATGRFAETFVDVESNEPVG-------------------QGIDMSQDDVRTSRPARTLDGRPRSSGSK

A0A5A7U1E5 Retrotransposon protein4.4e-2276.25Show/hide
Query:  MAKDLLNKSFPYYDELAYVFEKDKATGRFAETFVDVESNEPVG-------------------QGIDMSQDDVRTSRPART
        MAKDLLNKSFPYYDELAYVFEKDKATGRFAETFVDVESNEPVG                   QGIDMSQDDVRTSRPART
Subjt:  MAKDLLNKSFPYYDELAYVFEKDKATGRFAETFVDVESNEPVG-------------------QGIDMSQDDVRTSRPART

A0A5D3E2S0 Retrotransposon protein6.6e-1860.23Show/hide
Query:  KDLLNKSFPYYDELAYVFEKDKATGRFAETFVDVESNEPVG------------------QGIDMSQDDVRTSRPARTLDGRPRSSGSK
        K LLNK FPY+D+L YVF++DKATGRFAETFVDV SNEP G                  QGID+SQDD+R SRP+R L+GR  SSGSK
Subjt:  KDLLNKSFPYYDELAYVFEKDKATGRFAETFVDVESNEPVG------------------QGIDMSQDDVRTSRPARTLDGRPRSSGSK

A0A5D3E5U2 Retrotransposon protein3.9e-1861.11Show/hide
Query:  AKDLLNKSFPYYDELAYVFEKDKATGRFAETFVDVESNEPVG-------------------QGIDMSQDDVRTSRPARTLDGRPRSSGSK
        AK LLNKSFPYYDEL YVF  D+ATGRFAETF DV SNEP G                   QG+D+SQDDVR SRP+R  +GR RSSGSK
Subjt:  AKDLLNKSFPYYDELAYVFEKDKATGRFAETFVDVESNEPVG-------------------QGIDMSQDDVRTSRPARTLDGRPRSSGSK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAAGGACCTCCTCAACAAATCCTTTCCCTATTACGACGAGCTTGCATATGTGTTCGAAAAGGATAAGGCCACAGGTCGCTTTGCAGAGACGTTCGTTGATGTCGA
GTCTAATGAGCCTGTCGGCCAGGGGATTGACATGTCTCAAGATGATGTACGCACATCACGACCTGCTCGCACGTTAGACGGTAGGCCCAGATCGAGCGGATCCAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGAAGGACCTCCTCAACAAATCCTTTCCCTATTACGACGAGCTTGCATATGTGTTCGAAAAGGATAAGGCCACAGGTCGCTTTGCAGAGACGTTCGTTGATGTCGA
GTCTAATGAGCCTGTCGGCCAGGGGATTGACATGTCTCAAGATGATGTACGCACATCACGACCTGCTCGCACGTTAGACGGTAGGCCCAGATCGAGCGGATCCAAGTGA
Protein sequenceShow/hide protein sequence
MAKDLLNKSFPYYDELAYVFEKDKATGRFAETFVDVESNEPVGQGIDMSQDDVRTSRPARTLDGRPRSSGSK