CuGenDBv2

Gene ID	IVF0004851
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	17.9 kDa class I heat shock protein
Genome location	chr10:8302107..8302777
RNA-Seq Expression	IVF0004851
Synteny	IVF0004851
Gene Ontology terms	NA
InterPro domains	IPR002068 - Alpha crystallin/Hsp20 domain IPR008978 - HSP20-like chaperone IPR031107 - Small heat shock protein HSP20

Homology

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GenBank top hits

e value

%identity

Alignment

CDP09043.1 unnamed protein product [Coffea canephora]

1.42e-26

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Query:  TPNAHIFKENLP------------------LSGERRKETEEESEQWHRVERRSGKFLRRFRLPKNVKVEDIKTSMEDGILTVIVPKIEGVKPEIKSIAIS
        TP AH+FK ++P                  +SGER KE EE++++WHR ERRSGKFLRRFRLP+N KVE++K S+EDG+LTV VPK+E  KPE+KSI IS
Subjt:  TPNAHIFKENLP------------------LSGERRKETEEESEQWHRVERRSGKFLRRFRLPKNVKVEDIKTSMEDGILTVIVPKIEGVKPEIKSIAIS

KAF3774074.1 heat shock protein [Nymphaea thermarum]

3.92e-27

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Query:  TPNAHIFKENLP------------------LSGERRKETEEESEQWHRVERRSGKFLRRFRLPKNVKVEDIKTSMEDGILTVIVPKIEGVKPEIKSIAIS
        TP AH+FK +LP                  +SGER +ETEE+ E+WHR+ER SGKFLRRFRLP+N KVED+K SME+G+LTV VPK+E  KP+++SI IS
Subjt:  TPNAHIFKENLP------------------LSGERRKETEEESEQWHRVERRSGKFLRRFRLPKNVKVEDIKTSMEDGILTVIVPKIEGVKPEIKSIAIS

XP_004150237.2 18.1 kDa class I heat shock protein [Cucumis sativus]

3.88e-46

51.79

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Query:  LDNDGIHYQDKHGDTYTFKITAATELIHDFIRFPPNLLQS------------------------------------------------------RTPNAH
        +DNDGIHYQDKHG T TFK T  T+LI     FPP LLQS                                                       TPNAH
Subjt:  LDNDGIHYQDKHGDTYTFKITAATELIHDFIRFPPNLLQS------------------------------------------------------RTPNAH

Query:  IFKENLP------------------LSGERRKETEEESEQWHRVERRSGKFLRRFRLPKNVKVEDIKTSMEDGILTVIVPKIEGVKPEIKSIAIS
        IFK +LP                  LSGER KET+EESE+WHRVERRSGKFLRRFRLP+NVKVEDI  SMEDGILTVIVPKIEGVKPEIKSIAIS
Subjt:  IFKENLP------------------LSGERRKETEEESEQWHRVERRSGKFLRRFRLPKNVKVEDIKTSMEDGILTVIVPKIEGVKPEIKSIAIS

XP_031490427.1 17.8 kDa class I heat shock protein-like [Nymphaea colorata]

1.47e-26

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Query:  TPNAHIFKENLP------------------LSGERRKETEEESEQWHRVERRSGKFLRRFRLPKNVKVEDIKTSMEDGILTVIVPKIEGVKPEIKSIAIS
        TP AH+FK +LP                  +SGER +ETEE+ E+WHRVER SGKFLRRFRLP+N KVE++K SME+G+LTV VPK+E  KPE++SI IS
Subjt:  TPNAHIFKENLP------------------LSGERRKETEEESEQWHRVERRSGKFLRRFRLPKNVKVEDIKTSMEDGILTVIVPKIEGVKPEIKSIAIS

XP_038892902.1 17.8 kDa class I heat shock protein-like [Benincasa hispida]

5.37e-34

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Query:  TPNAHIFKENLP------------------LSGERRKETEEESEQWHRVERRSGKFLRRFRLPKNVKVEDIKTSMEDGILTVIVPKIEGVKPEIKSIAIS
        TPNAHIFK +LP                  LSGERRKE EEESE+W+RVERRSGKFLRRFRLP+NVKVED+ TSMEDG+LTV +PKIE +KPEIKSIAIS
Subjt:  TPNAHIFKENLP------------------LSGERRKETEEESEQWHRVERRSGKFLRRFRLPKNVKVEDIKTSMEDGILTVIVPKIEGVKPEIKSIAIS

TrEMBL top hits

e value

%identity

Alignment

A0A068UN39 SHSP domain-containing protein

1.0e-20

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Query:  TPNAHIFKENLP------------------LSGERRKETEEESEQWHRVERRSGKFLRRFRLPKNVKVEDIKTSMEDGILTVIVPKIEGVKPEIKSIAIS
        TP AH+FK ++P                  +SGER KE EE++++WHR ERRSGKFLRRFRLP+N KVE++K S+EDG+LTV VPK+E  KPE+KSI IS
Subjt:  TPNAHIFKENLP------------------LSGERRKETEEESEQWHRVERRSGKFLRRFRLPKNVKVEDIKTSMEDGILTVIVPKIEGVKPEIKSIAIS

A0A0A0KP16 SHSP domain-containing protein

5.1e-36

51.79

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Query:  LDNDGIHYQDKHGDTYTFKITAATELIHDFIRFPPNLLQS------------------------------------------------------RTPNAH
        +DNDGIHYQDKHG T TFK T  T+L    I FPP LLQS                                                       TPNAH
Subjt:  LDNDGIHYQDKHGDTYTFKITAATELIHDFIRFPPNLLQS------------------------------------------------------RTPNAH

Query:  IFKENLP------------------LSGERRKETEEESEQWHRVERRSGKFLRRFRLPKNVKVEDIKTSMEDGILTVIVPKIEGVKPEIKSIAIS
        IFK +LP                  LSGER KET+EESE+WHRVERRSGKFLRRFRLP+NVKVEDI  SMEDGILTVIVPKIEGVKPEIKSIAIS
Subjt:  IFKENLP------------------LSGERRKETEEESEQWHRVERRSGKFLRRFRLPKNVKVEDIKTSMEDGILTVIVPKIEGVKPEIKSIAIS

A0A5A7T3F7 18.1 kDa class I heat shock protein-like

1.8e-20

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Query:  TPNAHIFKENLP------------------LSGERRKETEEESEQWHRVERRSGKFLRRFRLPKNVKVEDIKTSMEDGILTVIVPKIEGVKPEIKSIAIS
        TP AHIFK +LP                  +SGER KE EE++++WHRVER SGKF+RRFRLP+N KVE++K SME+G+LTV VPK+E  KPEIKSI IS
Subjt:  TPNAHIFKENLP------------------LSGERRKETEEESEQWHRVERRSGKFLRRFRLPKNVKVEDIKTSMEDGILTVIVPKIEGVKPEIKSIAIS

A0A5A7UAZ9 17.8 kDa class I heat shock protein-like

1.8e-20

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Query:  TPNAHIFKENLP------------------LSGERRKETEEESEQWHRVERRSGKFLRRFRLPKNVKVEDIKTSMEDGILTVIVPKIEGVKPEIKSIAIS
        TP AHIFK +LP                  +SGER KE EE++++WHRVER SGKF+RRFRLP+N KVE++K SME+G+LTV VPK+E  KPEIKSI IS
Subjt:  TPNAHIFKENLP------------------LSGERRKETEEESEQWHRVERRSGKFLRRFRLPKNVKVEDIKTSMEDGILTVIVPKIEGVKPEIKSIAIS

A0A5D3DKI4 17.8 kDa class I heat shock protein-like

1.8e-20

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Query:  TPNAHIFKENLP------------------LSGERRKETEEESEQWHRVERRSGKFLRRFRLPKNVKVEDIKTSMEDGILTVIVPKIEGVKPEIKSIAIS
        TP AHIFK +LP                  +SGER KE EE++++WHRVER SGKF+RRFRLP+N KVE++K SME+G+LTV VPK+E  KPEIKSI IS
Subjt:  TPNAHIFKENLP------------------LSGERRKETEEESEQWHRVERRSGKFLRRFRLPKNVKVEDIKTSMEDGILTVIVPKIEGVKPEIKSIAIS

SwissProt top hits

e value

%identity

Alignment

P13853 17.6 kDa class I heat shock protein 3

7.6e-21

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Query:  TPNAHIFKENLP------------------LSGERRKETEEESEQWHRVERRSGKFLRRFRLPKNVKVEDIKTSMEDGILTVIVPKIEGVKPEIKSIAIS
        TP AH+FK +LP                  +SGER  E EE++++WHRVER SGKF RRFRLP+N K+E+IK SME+G+L+V VPK+   KPE+KSI IS
Subjt:  TPNAHIFKENLP------------------LSGERRKETEEESEQWHRVERRSGKFLRRFRLPKNVKVEDIKTSMEDGILTVIVPKIEGVKPEIKSIAIS

P19036 17.4 kDa class I heat shock protein

2.0e-21

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Query:  TPNAHIFKENLP------------------LSGERRKETEEESEQWHRVERRSGKFLRRFRLPKNVKVEDIKTSMEDGILTVIVPKIEGVKPEIKSIAIS
        TP AH+FK ++P                  +SGER  E EE+S+ WHRVER SGKF+RRFRLP+N KVE++K SME+G+L+V VPK++  KPE+KS+ IS
Subjt:  TPNAHIFKENLP------------------LSGERRKETEEESEQWHRVERRSGKFLRRFRLPKNVKVEDIKTSMEDGILTVIVPKIEGVKPEIKSIAIS

P19037 18.1 kDa class I heat shock protein

2.0e-21

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Query:  TPNAHIFKENLP------------------LSGERRKETEEESEQWHRVERRSGKFLRRFRLPKNVKVEDIKTSMEDGILTVIVPKIEGVKPEIKSIAIS
        TP AH+FK +LP                  +SGER KE EE++++WHRVER SGKF+RRFRLP+N K+E++K +ME+G+LTV+VPK    KP++KSI IS
Subjt:  TPNAHIFKENLP------------------LSGERRKETEEESEQWHRVERRSGKFLRRFRLPKNVKVEDIKTSMEDGILTVIVPKIEGVKPEIKSIAIS

P27396 17.8 kDa class I heat shock protein

4.5e-21

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Query:  TPNAHIFKENLP------------------LSGERRKETEEESEQWHRVERRSGKFLRRFRLPKNVKVEDIKTSMEDGILTVIVPKIEGVKPEIKSIAIS
        TP AH+FK +LP                  +SGER KE EE++++WHRVER SGKFLRRFRLP+N KV+++K +M +G++TV VPK+E  KPE+K+I IS
Subjt:  TPNAHIFKENLP------------------LSGERRKETEEESEQWHRVERRSGKFLRRFRLPKNVKVEDIKTSMEDGILTVIVPKIEGVKPEIKSIAIS

Q84Q77 17.9 kDa class I heat shock protein

9.0e-22

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Query:  TPNAHIFKENLP------------------LSGERRKETEEESEQWHRVERRSGKFLRRFRLPKNVKVEDIKTSMEDGILTVIVPKIEGVKPEIKSIAIS
        TP AH+FK ++P                  +SGER KE EE+++QWHRVER SGKFLRRFRLP N K E IK SME+G+LTV VPK E  KP++KSI IS
Subjt:  TPNAHIFKENLP------------------LSGERRKETEEESEQWHRVERRSGKFLRRFRLPKNVKVEDIKTSMEDGILTVIVPKIEGVKPEIKSIAIS

Arabidopsis top hits

e value

%identity

Alignment

AT1G07400.1 HSP20-like chaperones superfamily protein

1.4e-17

47.06

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Query:  TPNAHIFKENLP------------------LSGERRKETEEESEQWHRVERRSGKFLRRFRLPKNVKVEDIKTSMEDGILTVIVPKIEGV--KPEIKSIA
        T  AH+FK +LP                  +SGER  E EE+ + WHRVER SG+F R+F+LP+NVK++ +K SME+G+LTV VPK+E    K ++KSI 
Subjt:  TPNAHIFKENLP------------------LSGERRKETEEESEQWHRVERRSGKFLRRFRLPKNVKVEDIKTSMEDGILTVIVPKIEGV--KPEIKSIA

Query:  IS
        IS
Subjt:  IS

AT1G53540.1 HSP20-like chaperones superfamily protein

5.4e-22

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Query:  TPNAHIFKENLP------------------LSGERRKETEEESEQWHRVERRSGKFLRRFRLPKNVKVEDIKTSMEDGILTVIVPKIEGVKPEIKSIAIS
        TP AH+FK +LP                  +SGER  E EE++++WHRVER SGKF RRFRLP+N K+E+IK SME+G+L+V VPK+   KPE+KSI IS
Subjt:  TPNAHIFKENLP------------------LSGERRKETEEESEQWHRVERRSGKFLRRFRLPKNVKVEDIKTSMEDGILTVIVPKIEGVKPEIKSIAIS

AT2G29500.1 HSP20-like chaperones superfamily protein

1.1e-19

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Query:  TPNAHIFKENLP------------------LSGERRKETEEESEQWHRVERRSGKFLRRFRLPKNVKVEDIKTSMEDGILTVIVPKIEGVKPEIKSIAIS
        TP AH+FK +LP                  +SGER  E E++++ WHRVER SG+F RRFRLP+NVK++ +K +ME+G+LTV VPK E  K ++KSI IS
Subjt:  TPNAHIFKENLP------------------LSGERRKETEEESEQWHRVERRSGKFLRRFRLPKNVKVEDIKTSMEDGILTVIVPKIEGVKPEIKSIAIS

AT3G46230.1 heat shock protein 17.4

1.4e-22

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Query:  TPNAHIFKENLP------------------LSGERRKETEEESEQWHRVERRSGKFLRRFRLPKNVKVEDIKTSMEDGILTVIVPKIEGVKPEIKSIAIS
        TP AH+FK ++P                  +SGER  E EE+S+ WHRVER SGKF+RRFRLP+N KVE++K SME+G+L+V VPK++  KPE+KS+ IS
Subjt:  TPNAHIFKENLP------------------LSGERRKETEEESEQWHRVERRSGKFLRRFRLPKNVKVEDIKTSMEDGILTVIVPKIEGVKPEIKSIAIS

AT5G59720.1 heat shock protein 18.2

1.4e-22

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Query:  TPNAHIFKENLP------------------LSGERRKETEEESEQWHRVERRSGKFLRRFRLPKNVKVEDIKTSMEDGILTVIVPKIEGVKPEIKSIAIS
        TP AH+FK +LP                  +SGER KE EE++++WHRVER SGKF+RRFRLP+N K+E++K +ME+G+LTV+VPK    KP++KSI IS
Subjt:  TPNAHIFKENLP------------------LSGERRKETEEESEQWHRVERRSGKFLRRFRLPKNVKVEDIKTSMEDGILTVIVPKIEGVKPEIKSIAIS

Sequences

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CDS sequence

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ATGTCCATCACACGTTTGGACAATGACGGTATCCATTACCAAGATAAACACGGAGACACGTATACATTTAAAATAACAGCAGCAACCGAACTCATCCATGATTTCATTCG
ATTTCCACCAAACTTACTCCAAAGCAGAACGCCAAATGCTCACATCTTCAAGGAGAATCTTCCTTTGAGTGGTGAGAGAAGGAAAGAGACAGAGGAGGAGAGCGAACAGT
GGCACAGAGTGGAGCGGAGGAGTGGTAAGTTCTTGAGGAGATTCAGATTGCCGAAGAATGTCAAAGTGGAGGACATAAAGACAAGCATGGAGGACGGAATTTTGACGGTG
ATTGTACCTAAAATTGAAGGCGTAAAGCCTGAAATCAAGTCCATTGCAATCTCTTATTACATATGTTTACAATCATGTTACGTTCCATTGATACGTACTTCATTGATTAC
AATCCTTGTGTATTATTAA

mRNA sequence

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Protein sequence

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MSITRLDNDGIHYQDKHGDTYTFKITAATELIHDFIRFPPNLLQSRTPNAHIFKENLPLSGERRKETEEESEQWHRVERRSGKFLRRFRLPKNVKVEDIKTSMEDGILTV
IVPKIEGVKPEIKSIAISYYICLQSCYVPLIRTSLITILVYY

IVF0004851 (gene) of Melon (IVF77) v1 genome