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IVF0004888 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0004888
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGamma-aminobutyrate transaminase POP2
Genome locationchr10:16020000..16020295
RNA-Seq ExpressionIVF0004888
SyntenyIVF0004888
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045869.1 uncharacterized protein E6C27_scaffold243G004050 [Cucumis melo var. makuwa]4.25e-0869.39Show/hide
Query:  MSIGNTLILDAIKGISQRFRVASEDSLYKCFSFVLHKIE--KERKREKR
        MS+ NTLI DAIKGIS RFR AS D LYK FS VL++ E  KER+REKR
Subjt:  MSIGNTLILDAIKGISQRFRVASEDSLYKCFSFVLHKIE--KERKREKR

KAA0059086.1 gamma-aminobutyrate transaminase POP2 [Cucumis melo var. makuwa]2.23e-2475.71Show/hide
Query:  MSIGNTLILDAIKGISQRFRVASEDSLYKCFSFVLHKIEKERKREKRETKIRRHPFRRHCHPSP-SSATL
        MS+GNTLILD IKGIS+RFR AS D L+KCFS VLH+IE ER+RE RETKI R PFRR C PSP SSATL
Subjt:  MSIGNTLILDAIKGISQRFRVASEDSLYKCFSFVLHKIEKERKREKRETKIRRHPFRRHCHPSP-SSATL

KAA0062461.1 hypothetical protein E6C27_scaffold130G00490 [Cucumis melo var. makuwa]4.02e-1048.65Show/hide
Query:  MSIGNTLILDAIKGISQRFRVASEDSLYKCFSFVLHKIEKERKREKRETKI-----RRHPFRRHCHPSPSSATL
        MSIGNTLI D IKGI + FR AS+DSLYK F+++LH+ E ER+R + + +                PSP SATL
Subjt:  MSIGNTLILDAIKGISQRFRVASEDSLYKCFSFVLHKIEKERKREKRETKI-----RRHPFRRHCHPSPSSATL

TYK11143.1 uncharacterized protein E5676_scaffold66G00500 [Cucumis melo var. makuwa]2.30e-0855.07Show/hide
Query:  MSIGNTLILDAIKGISQRFRVASEDSLYKCFSFVLHKIEKERKREKRETKIRRHPFRRHCHPSPSSATL
        MSIGN  I DA  GI Q    AS++ LYK FS VLH+ E ER +   E +  R PF R CHPSP SATL
Subjt:  MSIGNTLILDAIKGISQRFRVASEDSLYKCFSFVLHKIEKERKREKRETKIRRHPFRRHCHPSPSSATL

TYK11801.1 GDSL esterase/lipase [Cucumis melo var. makuwa]4.76e-0644.3Show/hide
Query:  MSIGNTLILDAIKGISQRFRVASEDSLYKCFSFVLHKIEKERKREKRETKIRRHPFRRHC----------HPSPSSATL
        MS+GN  I D+  GIS+    AS + LY  FS + H+ E ER +E  E +  R PFR HC          HPSP SATL
Subjt:  MSIGNTLILDAIKGISQRFRVASEDSLYKCFSFVLHKIEKERKREKRETKIRRHPFRRHC----------HPSPSSATL

TrEMBL top hitse value%identityAlignment
A0A5A7V9W7 Uncharacterized protein7.6e-0748.65Show/hide
Query:  MSIGNTLILDAIKGISQRFRVASEDSLYKCFSFVLHKIEKERKREKRETKI-----RRHPFRRHCHPSPSSATL
        MSIGNTLI D IKGI + FR AS+DSLYK F+++LH+ E ER+R + + +                PSP SATL
Subjt:  MSIGNTLILDAIKGISQRFRVASEDSLYKCFSFVLHKIEKERKREKRETKI-----RRHPFRRHCHPSPSSATL

A0A5D3CGX4 Uncharacterized protein2.2e-0655.07Show/hide
Query:  MSIGNTLILDAIKGISQRFRVASEDSLYKCFSFVLHKIEKERKREKRETKIRRHPFRRHCHPSPSSATL
        MSIGN  I DA  GI Q    AS++ LYK FS VLH+ E ER +   E +  R PF R CHPSP SATL
Subjt:  MSIGNTLILDAIKGISQRFRVASEDSLYKCFSFVLHKIEKERKREKRETKIRRHPFRRHCHPSPSSATL

A0A5D3CU45 Uncharacterized protein1.1e-0569.39Show/hide
Query:  MSIGNTLILDAIKGISQRFRVASEDSLYKCFSFVLHKI--EKERKREKR
        MS+ NTLI DAIKGIS RFR AS D LYK FS VL++   EKER+REKR
Subjt:  MSIGNTLILDAIKGISQRFRVASEDSLYKCFSFVLHKI--EKERKREKR

A0A5D3E0D4 Gamma-aminobutyrate transaminase POP21.1e-1875.71Show/hide
Query:  MSIGNTLILDAIKGISQRFRVASEDSLYKCFSFVLHKIEKERKREKRETKIRRHPFRRHCHPS-PSSATL
        MS+GNTLILD IKGIS+RFR AS D L+KCFS VLH+IE ER+RE RETKI R PFRR C PS PSSATL
Subjt:  MSIGNTLILDAIKGISQRFRVASEDSLYKCFSFVLHKIEKERKREKRETKIRRHPFRRHCHPS-PSSATL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCATCGGGAATACCCTTATTCTCGATGCCATAAAAGGGATCTCCCAACGTTTTCGTGTTGCGTCAGAAGATTCCCTTTATAAATGTTTCAGTTTTGTTTTACACAA
AATTGAAAAAGAAAGGAAAAGGGAGAAGAGAGAAACAAAAATTCGTCGCCATCCGTTCCGTCGTCATTGTCATCCCTCGCCATCGTCTGCCACCTTAGGTAAGTTTAGAT
ATAAAGATTTTATTTTGAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGAGCATCGGGAATACCCTTATTCTCGATGCCATAAAAGGGATCTCCCAACGTTTTCGTGTTGCGTCAGAAGATTCCCTTTATAAATGTTTCAGTTTTGTTTTACACAA
AATTGAAAAAGAAAGGAAAAGGGAGAAGAGAGAAACAAAAATTCGTCGCCATCCGTTCCGTCGTCATTGTCATCCCTCGCCATCGTCTGCCACCTTAGGTAAGTTTAGAT
ATAAAGATTTTATTTTGAAATAG
Protein sequenceShow/hide protein sequence
MSIGNTLILDAIKGISQRFRVASEDSLYKCFSFVLHKIEKERKREKRETKIRRHPFRRHCHPSPSSATLGKFRYKDFILK