; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0004940 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0004940
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRING-type domain-containing protein
Genome locationchr06:13447797..13449954
RNA-Seq ExpressionIVF0004940
SyntenyIVF0004940
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR017907 - Zinc finger, RING-type, conserved site
IPR027370 - RING-type zinc-finger, LisH dimerisation motif


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0056261.1 LON peptidase N-terminal domain and RING finger protein 3-like [Cucumis melo var. makuwa]8.07e-12099.47Show/hide
Query:  MVSELEGSTAGTSELKPLGIANDADSFLSPRFKSAAAMAGWDEEALLIASLVVDDTPEREFQQKKRSDLQRKSPASASASRRKRRTLTSIISIPVTVLDL
        MVSELEGSTAGTSELKPLGIANDADSFLSPRFKSAAAMAGWDEEALLIASLVVDDTPEREFQQKKRSDLQRKSPASASASRRKRRTLTSIISIPVTVLDL
Subjt:  MVSELEGSTAGTSELKPLGIANDADSFLSPRFKSAAAMAGWDEEALLIASLVVDDTPEREFQQKKRSDLQRKSPASASASRRKRRTLTSIISIPVTVLDL

Query:  EEEEPAVKDDGPKQEPKYAEAEAKKCDSMVEQKADASSLSSSTLPCMDKLREELSCAICLEICFEPSTTPCGHSFCKKCLRSAADKCEK
        EEEEPAVKDDGPKQEPKYAEAEAKKCDSMVEQKADASSLSSSTLPCMDKLREELSCAICLEICFEPSTTPCGHSFCKKCLRSAADKC K
Subjt:  EEEEPAVKDDGPKQEPKYAEAEAKKCDSMVEQKADASSLSSSTLPCMDKLREELSCAICLEICFEPSTTPCGHSFCKKCLRSAADKCEK

KAG7017808.1 Tripartite motif-containing protein 65, partial [Cucurbita argyrosperma subsp. argyrosperma]1.22e-8376.96Show/hide
Query:  EGSTAGTSE-------LKPLGIANDADSFLSPRFKSAAAMAGWDEEALLIASLVVDDTPEREFQQKKRSDLQRKSPASASASRRKRRTLTSIISIPVTVL
        EGSTA  SE        +PL   NDADSF SPRFKSAAAMAGWDEEALLIASLVVDDTPEREFQQKKRS L  KSP S S  RRKRRT TSIISIPV VL
Subjt:  EGSTAGTSE-------LKPLGIANDADSFLSPRFKSAAAMAGWDEEALLIASLVVDDTPEREFQQKKRSDLQRKSPASASASRRKRRTLTSIISIPVTVL

Query:  DLEEEEPAVKDDGPKQEPKYAEAEAKKCDSMVEQKADASSLSSSTLPCMDKLREELSCAICLEICFEPSTTPCGHSFCKKCLRSAADKCEK
        DL+ EEP V+DD  KQ+P+ AEAE KK +S++EQKA  SSLS STLPC+DKLREELSCAICLEICFEPSTTPCGHSFCKKCLRSAAD+C K
Subjt:  DLEEEEPAVKDDGPKQEPKYAEAEAKKCDSMVEQKADASSLSSSTLPCMDKLREELSCAICLEICFEPSTTPCGHSFCKKCLRSAADKCEK

XP_004145719.1 uncharacterized protein LOC101209296 [Cucumis sativus]9.02e-10391.01Show/hide
Query:  MVSELEGSTAGTSELKPLGIANDADSFLSPRFKSAAAMAGWDEEALLIASLVVDDTPEREFQQKKRSDLQRKSPASASASRRKRRTLTSIISIPVTVLDL
        MVSE  GSTA  SE KPLGIANDADSFLSPRFKSAAAMAGWDEEALLIASLVVDDTPEREFQQKKRS LQRKSPAS S  RRKRRTLTSIISIPV VLDL
Subjt:  MVSELEGSTAGTSELKPLGIANDADSFLSPRFKSAAAMAGWDEEALLIASLVVDDTPEREFQQKKRSDLQRKSPASASASRRKRRTLTSIISIPVTVLDL

Query:  EEEEPAVKDDGPKQEPKYAEAEAKKCDSMVEQKADASSLSSSTLPCMDKLREELSCAICLEICFEPSTTPCGHSFCKKCLRSAADKCEK
        +E EP VKDDGPKQEPK AEAEAKK DSMVEQKADASSL+SSTLPCMDKLREELSCAICLEICFEPSTTPCGHSFCKKCLRSAADKC K
Subjt:  EEEEPAVKDDGPKQEPKYAEAEAKKCDSMVEQKADASSLSSSTLPCMDKLREELSCAICLEICFEPSTTPCGHSFCKKCLRSAADKCEK

XP_008450054.1 PREDICTED: LON peptidase N-terminal domain and RING finger protein 3-like [Cucumis melo]8.07e-12099.47Show/hide
Query:  MVSELEGSTAGTSELKPLGIANDADSFLSPRFKSAAAMAGWDEEALLIASLVVDDTPEREFQQKKRSDLQRKSPASASASRRKRRTLTSIISIPVTVLDL
        MVSELEGSTAGTSELKPLGIANDADSFLSPRFKSAAAMAGWDEEALLIASLVVDDTPEREFQQKKRSDLQRKSPASASASRRKRRTLTSIISIPVTVLDL
Subjt:  MVSELEGSTAGTSELKPLGIANDADSFLSPRFKSAAAMAGWDEEALLIASLVVDDTPEREFQQKKRSDLQRKSPASASASRRKRRTLTSIISIPVTVLDL

Query:  EEEEPAVKDDGPKQEPKYAEAEAKKCDSMVEQKADASSLSSSTLPCMDKLREELSCAICLEICFEPSTTPCGHSFCKKCLRSAADKCEK
        EEEEPAVKDDGPKQEPKYAEAEAKKCDSMVEQKADASSLSSSTLPCMDKLREELSCAICLEICFEPSTTPCGHSFCKKCLRSAADKC K
Subjt:  EEEEPAVKDDGPKQEPKYAEAEAKKCDSMVEQKADASSLSSSTLPCMDKLREELSCAICLEICFEPSTTPCGHSFCKKCLRSAADKCEK

XP_038895790.1 putative E3 ubiquitin-protein ligase RING1a [Benincasa hispida]1.75e-9282.72Show/hide
Query:  EGSTAGTSE-------LKPLGIANDADSFLSPRFKSAAAMAGWDEEALLIASLVVDDTPEREFQQKKRSDLQRKSPASASASRRKRRTLTSIISIPVTVL
        EGSTA  SE        KP GI ND +SFLSPRFKSAAAMAGWDEE LLIASLVVDDTPERE QQKKRS LQRKSPAS    RRKRRTLTSIIS+PVTVL
Subjt:  EGSTAGTSE-------LKPLGIANDADSFLSPRFKSAAAMAGWDEEALLIASLVVDDTPEREFQQKKRSDLQRKSPASASASRRKRRTLTSIISIPVTVL

Query:  DLEEEEPAVKDDGPKQEPKYAEAEAKKCDSMVEQKADASSLSSSTLPCMDKLREELSCAICLEICFEPSTTPCGHSFCKKCLRSAADKCEK
        DL+EEEP VKDD PKQ+P+ AEAE KK DSMVEQK DASSLS STLPCMDKLREELSCAICLEICFEPSTTPCGHSFCKKCLRSAADKC K
Subjt:  DLEEEEPAVKDDGPKQEPKYAEAEAKKCDSMVEQKADASSLSSSTLPCMDKLREELSCAICLEICFEPSTTPCGHSFCKKCLRSAADKCEK

TrEMBL top hitse value%identityAlignment
A0A0A0LBY2 RING-type domain-containing protein3.3e-8291.85Show/hide
Query:  EGSTAGTSELKPLGIANDADSFLSPRFKSAAAMAGWDEEALLIASLVVDDTPEREFQQKKRSDLQRKSPASASASRRKRRTLTSIISIPVTVLDLEEEEP
        EGSTA  SE KPLGIANDADSFLSPRFKSAAAMAGWDEEALLIASLVVDDTPEREFQQKKRS LQRKSP  AS SRRKRRTLTSIISIPV VLDL+E EP
Subjt:  EGSTAGTSELKPLGIANDADSFLSPRFKSAAAMAGWDEEALLIASLVVDDTPEREFQQKKRSDLQRKSPASASASRRKRRTLTSIISIPVTVLDLEEEEP

Query:  AVKDDGPKQEPKYAEAEAKKCDSMVEQKADASSLSSSTLPCMDKLREELSCAICLEICFEPSTTPCGHSFCKKCLRSAADKCEK
         VKDDGPKQEPK AEAEAKK DSMVEQKADASSL+SSTLPCMDKLREELSCAICLEICFEPSTTPCGHSFCKKCLRSAADKC K
Subjt:  AVKDDGPKQEPKYAEAEAKKCDSMVEQKADASSLSSSTLPCMDKLREELSCAICLEICFEPSTTPCGHSFCKKCLRSAADKCEK

A0A1S3BPD3 LON peptidase N-terminal domain and RING finger protein 3-like2.6e-9599.47Show/hide
Query:  MVSELEGSTAGTSELKPLGIANDADSFLSPRFKSAAAMAGWDEEALLIASLVVDDTPEREFQQKKRSDLQRKSPASASASRRKRRTLTSIISIPVTVLDL
        MVSELEGSTAGTSELKPLGIANDADSFLSPRFKSAAAMAGWDEEALLIASLVVDDTPEREFQQKKRSDLQRKSPASASASRRKRRTLTSIISIPVTVLDL
Subjt:  MVSELEGSTAGTSELKPLGIANDADSFLSPRFKSAAAMAGWDEEALLIASLVVDDTPEREFQQKKRSDLQRKSPASASASRRKRRTLTSIISIPVTVLDL

Query:  EEEEPAVKDDGPKQEPKYAEAEAKKCDSMVEQKADASSLSSSTLPCMDKLREELSCAICLEICFEPSTTPCGHSFCKKCLRSAADKCEK
        EEEEPAVKDDGPKQEPKYAEAEAKKCDSMVEQKADASSLSSSTLPCMDKLREELSCAICLEICFEPSTTPCGHSFCKKCLRSAADKC K
Subjt:  EEEEPAVKDDGPKQEPKYAEAEAKKCDSMVEQKADASSLSSSTLPCMDKLREELSCAICLEICFEPSTTPCGHSFCKKCLRSAADKCEK

A0A5A7URU5 LON peptidase N-terminal domain and RING finger protein 3-like2.6e-9599.47Show/hide
Query:  MVSELEGSTAGTSELKPLGIANDADSFLSPRFKSAAAMAGWDEEALLIASLVVDDTPEREFQQKKRSDLQRKSPASASASRRKRRTLTSIISIPVTVLDL
        MVSELEGSTAGTSELKPLGIANDADSFLSPRFKSAAAMAGWDEEALLIASLVVDDTPEREFQQKKRSDLQRKSPASASASRRKRRTLTSIISIPVTVLDL
Subjt:  MVSELEGSTAGTSELKPLGIANDADSFLSPRFKSAAAMAGWDEEALLIASLVVDDTPEREFQQKKRSDLQRKSPASASASRRKRRTLTSIISIPVTVLDL

Query:  EEEEPAVKDDGPKQEPKYAEAEAKKCDSMVEQKADASSLSSSTLPCMDKLREELSCAICLEICFEPSTTPCGHSFCKKCLRSAADKCEK
        EEEEPAVKDDGPKQEPKYAEAEAKKCDSMVEQKADASSLSSSTLPCMDKLREELSCAICLEICFEPSTTPCGHSFCKKCLRSAADKC K
Subjt:  EEEEPAVKDDGPKQEPKYAEAEAKKCDSMVEQKADASSLSSSTLPCMDKLREELSCAICLEICFEPSTTPCGHSFCKKCLRSAADKCEK

A0A6J1F9B4 E3 ubiquitin-protein ligase ORTHRUS 1-like6.6e-6776.44Show/hide
Query:  EGSTAGTS-------ELKPLGIANDADSFLSPRFKSAAAMAGWDEEALLIASLVVDDTPEREFQQKKRSDLQRKSPASASASRRKRRTLTSIISIPVTVL
        EGS A  S       E +PL   NDADSF SPRFKSAAAMAGWDEEALLIASLVVDDTPEREFQQKKRS L  KSP   S SRRKRRT TSIISIPV VL
Subjt:  EGSTAGTS-------ELKPLGIANDADSFLSPRFKSAAAMAGWDEEALLIASLVVDDTPEREFQQKKRSDLQRKSPASASASRRKRRTLTSIISIPVTVL

Query:  DLEEEEPAVKDDGPKQEPKYAEAEAKKCDSMVEQKADASSLSSSTLPCMDKLREELSCAICLEICFEPSTTPCGHSFCKKCLRSAADKCEK
        DL+ EEP V+DD  KQ+P+ AEAE KK +S++EQKA  SSLS STLPC+DKLREELSCAICLEICFEPSTTPCGHSFCKKCLRSAAD+C K
Subjt:  DLEEEEPAVKDDGPKQEPKYAEAEAKKCDSMVEQKADASSLSSSTLPCMDKLREELSCAICLEICFEPSTTPCGHSFCKKCLRSAADKCEK

A0A6J1J0X7 E3 ubiquitin-protein ligase TRIM39-like1.5e-6676.96Show/hide
Query:  EGSTAGTS-------ELKPLGIANDADSFLSPRFKSAAAMAGWDEEALLIASLVVDDTPEREFQQKKRSDLQRKSPASASASRRKRRTLTSIISIPVTVL
        EGSTA  S       E +PL   NDADSF SPRFKSAAAMAGWDEEALLIASLVVDDTPEREFQQKKRS L  KSP   S SRRKRR  TS ISIPV VL
Subjt:  EGSTAGTS-------ELKPLGIANDADSFLSPRFKSAAAMAGWDEEALLIASLVVDDTPEREFQQKKRSDLQRKSPASASASRRKRRTLTSIISIPVTVL

Query:  DLEEEEPAVKDDGPKQEPKYAEAEAKKCDSMVEQKADASSLSSSTLPCMDKLREELSCAICLEICFEPSTTPCGHSFCKKCLRSAADKCEK
        DL+ EEP VKDD  KQ+P+ AEAE KK DS++EQKA ASSLS STLP +DKLREELSCAICLEICFEPSTTPCGHSFCKKCLRSAAD+C K
Subjt:  DLEEEEPAVKDDGPKQEPKYAEAEAKKCDSMVEQKADASSLSSSTLPCMDKLREELSCAICLEICFEPSTTPCGHSFCKKCLRSAADKCEK

SwissProt top hitse value%identityAlignment
Q14258 E3 ubiquitin/ISG15 ligase TRIM253.1e-0570.97Show/hide
Query:  LREELSCAICLEICFEPSTTPCGHSFCKKCL
        L EELSC+ICLE   EP TTPCGH+FC  CL
Subjt:  LREELSCAICLEICFEPSTTPCGHSFCKKCL

Q61510 E3 ubiquitin/ISG15 ligase TRIM254.8e-0661.76Show/hide
Query:  MDKLREELSCAICLEICFEPSTTPCGHSFCKKCL
        ++ L EELSC++CLE+  EP TTPCGH+FC  CL
Subjt:  MDKLREELSCAICLEICFEPSTTPCGHSFCKKCL

Q6PJ69 Tripartite motif-containing protein 658.2e-0653.66Show/hide
Query:  LREELSCAICLEICFEPSTTPCGHSFCKKCLRSAADKCEKA
        L E+L+CAICL +  +P T PCGH+FC  C+R   D+C KA
Subjt:  LREELSCAICLEICFEPSTTPCGHSFCKKCLRSAADKCEKA

Q8BVP1 Probable E3 ubiquitin-protein ligase TRIML12.4e-0558.97Show/hide
Query:  STLPCMDKLREELSCAICLEICFEPSTTPCGHSFCKKCL
        ST   M+ LREEL+C ICL+    P TT CGHSFC  CL
Subjt:  STLPCMDKLREELSCAICLEICFEPSTTPCGHSFCKKCL

Q8N9V2 Probable E3 ubiquitin-protein ligase TRIML13.1e-0558.97Show/hide
Query:  STLPCMDKLREELSCAICLEICFEPSTTPCGHSFCKKCL
        ST   M+ LREEL+C ICL+    P TT CGHSFC  CL
Subjt:  STLPCMDKLREELSCAICLEICFEPSTTPCGHSFCKKCL

Arabidopsis top hitse value%identityAlignment
AT1G18660.1 zinc finger (C3HC4-type RING finger) family protein3.4e-0733.85Show/hide
Query:  MDKLREELSCAICLEICFEPSTTPCGHSFCKKCLRSAADKCEKARIFHVPAHMGVETSRRSTLLH
        M +  ++  C +CL++ +EP+TTPCGH+FC+ CL  + D+  K  +      M   T   S  L+
Subjt:  MDKLREELSCAICLEICFEPSTTPCGHSFCKKCLRSAADKCEKARIFHVPAHMGVETSRRSTLLH

AT1G18660.2 zinc finger (C3HC4-type RING finger) family protein3.4e-0733.85Show/hide
Query:  MDKLREELSCAICLEICFEPSTTPCGHSFCKKCLRSAADKCEKARIFHVPAHMGVETSRRSTLLH
        M +  ++  C +CL++ +EP+TTPCGH+FC+ CL  + D+  K  +      M   T   S  L+
Subjt:  MDKLREELSCAICLEICFEPSTTPCGHSFCKKCLRSAADKCEKARIFHVPAHMGVETSRRSTLLH

AT1G18660.3 zinc finger (C3HC4-type RING finger) family protein3.4e-0733.85Show/hide
Query:  MDKLREELSCAICLEICFEPSTTPCGHSFCKKCLRSAADKCEKARIFHVPAHMGVETSRRSTLLH
        M +  ++  C +CL++ +EP+TTPCGH+FC+ CL  + D+  K  +      M   T   S  L+
Subjt:  MDKLREELSCAICLEICFEPSTTPCGHSFCKKCLRSAADKCEKARIFHVPAHMGVETSRRSTLLH

AT1G18660.4 zinc finger (C3HC4-type RING finger) family protein3.4e-0733.85Show/hide
Query:  MDKLREELSCAICLEICFEPSTTPCGHSFCKKCLRSAADKCEKARIFHVPAHMGVETSRRSTLLH
        M +  ++  C +CL++ +EP+TTPCGH+FC+ CL  + D+  K  +      M   T   S  L+
Subjt:  MDKLREELSCAICLEICFEPSTTPCGHSFCKKCLRSAADKCEKARIFHVPAHMGVETSRRSTLLH

AT3G27330.1 zinc finger (C3HC4-type RING finger) family protein4.7e-4154.55Show/hide
Query:  GTSELKPLGIAND-----ADSFLSPRFKSAAAMAGWDEEALLIASLVVDDTPER-EFQQKKRSDLQRKSPASASASRRKRRTLTSIISIPVTVLD---LE
        G++  K + IA +     A+ F+SPRFKSAAAMAGWDEE L+IAS VVDDTPER   ++++RS+L  KS   + +SRR +R   S++ +PV  LD     
Subjt:  GTSELKPLGIAND-----ADSFLSPRFKSAAAMAGWDEEALLIASLVVDDTPER-EFQQKKRSDLQRKSPASASASRRKRRTLTSIISIPVTVLD---LE

Query:  EEEPAVKDDGPKQEPKYAEAEAKKCDSMVEQKADASSLSSS-TLPCMDKLREELSCAICLEICFEPSTTPCGHSFCKKCLRSAADKC
        EEE + +    K+E +    E KK D       D  SLS    LPC+DKLR+ELSCAICLEICFEPSTT CGHSFCKKCLRSAADKC
Subjt:  EEEPAVKDDGPKQEPKYAEAEAKKCDSMVEQKADASSLSSS-TLPCMDKLREELSCAICLEICFEPSTTPCGHSFCKKCLRSAADKC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGTCAGAACTAGAAGGATCCACAGCAGGCACTTCAGAATTGAAACCACTTGGAATTGCAAATGATGCGGACAGTTTTCTTAGCCCTAGATTCAAGTCGGCGGCCGC
TATGGCCGGCTGGGATGAAGAGGCTCTTCTAATCGCGAGCCTCGTGGTTGACGACACGCCGGAAAGAGAGTTTCAGCAGAAGAAACGATCTGATCTCCAGCGCAAGAGTC
CTGCTTCTGCTTCTGCTTCAAGAAGGAAACGGAGGACTTTGACGAGCATAATTTCGATTCCGGTGACTGTTCTTGACCTCGAAGAAGAAGAACCCGCTGTGAAAGATGAT
GGTCCAAAACAAGAGCCAAAATATGCAGAAGCTGAAGCAAAGAAGTGTGATTCAATGGTTGAACAGAAAGCTGACGCTTCTTCTTTATCATCTTCAACACTCCCATGCAT
GGATAAGCTCAGAGAAGAGCTTTCTTGTGCTATTTGTTTGGAAATTTGCTTCGAACCTAGTACCACACCTTGTGGACACAGTTTCTGCAAGAAATGTCTAAGATCTGCAG
CTGACAAATGTGAAAAAGCAAGGATTTTTCATGTGCCTGCACATATGGGAGTCGAAACCTCTCGAAGGTCAACACTACTTCATCCTCAATCTAGTCCTATAAGTTGTAGT
ATGGGTAGAGGGCTTGTTACTGTGCATAAAATGTGTGATGACATATAA
mRNA sequenceShow/hide mRNA sequence
ATGGTGTCAGAACTAGAAGGATCCACAGCAGGCACTTCAGAATTGAAACCACTTGGAATTGCAAATGATGCGGACAGTTTTCTTAGCCCTAGATTCAAGTCGGCGGCCGC
TATGGCCGGCTGGGATGAAGAGGCTCTTCTAATCGCGAGCCTCGTGGTTGACGACACGCCGGAAAGAGAGTTTCAGCAGAAGAAACGATCTGATCTCCAGCGCAAGAGTC
CTGCTTCTGCTTCTGCTTCAAGAAGGAAACGGAGGACTTTGACGAGCATAATTTCGATTCCGGTGACTGTTCTTGACCTCGAAGAAGAAGAACCCGCTGTGAAAGATGAT
GGTCCAAAACAAGAGCCAAAATATGCAGAAGCTGAAGCAAAGAAGTGTGATTCAATGGTTGAACAGAAAGCTGACGCTTCTTCTTTATCATCTTCAACACTCCCATGCAT
GGATAAGCTCAGAGAAGAGCTTTCTTGTGCTATTTGTTTGGAAATTTGCTTCGAACCTAGTACCACACCTTGTGGACACAGTTTCTGCAAGAAATGTCTAAGATCTGCAG
CTGACAAATGTGAAAAAGCAAGGATTTTTCATGTGCCTGCACATATGGGAGTCGAAACCTCTCGAAGGTCAACACTACTTCATCCTCAATCTAGTCCTATAAGTTGTAGT
ATGGGTAGAGGGCTTGTTACTGTGCATAAAATGTGTGATGACATATAA
Protein sequenceShow/hide protein sequence
MVSELEGSTAGTSELKPLGIANDADSFLSPRFKSAAAMAGWDEEALLIASLVVDDTPEREFQQKKRSDLQRKSPASASASRRKRRTLTSIISIPVTVLDLEEEEPAVKDD
GPKQEPKYAEAEAKKCDSMVEQKADASSLSSSTLPCMDKLREELSCAICLEICFEPSTTPCGHSFCKKCLRSAADKCEKARIFHVPAHMGVETSRRSTLLHPQSSPISCS
MGRGLVTVHKMCDDI