| GenBank top hits | e value | %identity | Alignment |
|---|
| TYK19428.1 DNA-directed RNA polymerase IV subunit 1 [Cucumis melo var. makuwa] | 0.0 | 91.17 | Show/hide |
Query: MRFKLSTTDMFKKSMIMVEVKENMSKKYQKRVAKGGLPSDYWDFIPKDEQQEESYCRPNRKILTHAQ-----------FLKKFVPAIDSLFLNSFPVTPN
MRFKLSTTDMFKKSMIMVEVKENMSKKYQKRVAKGGLPSDYWDFIPKDEQQEESYCRPNRKILTHAQ FLKKFVPAIDSLFLNSFPVTPN
Subjt: MRFKLSTTDMFKKSMIMVEVKENMSKKYQKRVAKGGLPSDYWDFIPKDEQQEESYCRPNRKILTHAQ-----------FLKKFVPAIDSLFLNSFPVTPN
Query: SHRVTEMAHSFSNGQRLIFDERTRAYKKVVDFRGTANELGSRVLDCLKISK-------------------------DTATSSSGLRWIKDVVLGKRSDHC
SHRVTEMAHSFSNGQRLIFDERTRAYKKVVDFRGTANELGSRVLDCLKISK DTATSSSGLRWIKDVVLGKRSDHC
Subjt: SHRVTEMAHSFSNGQRLIFDERTRAYKKVVDFRGTANELGSRVLDCLKISK-------------------------DTATSSSGLRWIKDVVLGKRSDHC
Query: FRMVVVGDPNIELSEIGIPCHVAERLQISEHLSSWNMKKL------------KIYVRREGRLVRVRNVLELNMGDTIYRPLADGDVVLVNRPPSIHQHSL
FRMVVVGDPNIELSEIGIPCHVAERLQISEHLSSWNMKKL +IYVRREGRLVRVRNVLELNMGDTIYRPLADGDVVLVNRPPSIHQHSL
Subjt: FRMVVVGDPNIELSEIGIPCHVAERLQISEHLSSWNMKKL------------KIYVRREGRLVRVRNVLELNMGDTIYRPLADGDVVLVNRPPSIHQHSL
Query: IALSVKLLPVSAVLSLNPLCCSPFRGDFDGDCLHGYVPQSLEARVEVRELVSLDRQLINGQSGRNLLSLSHDSLTAAHLILEDGVSLNLFQMQQLQMLTL
IALSVKLLPVSAVLSLNPLCCSPFRGDFDGDCLHGYVPQSLEARVEVRELVSLDRQLINGQSGRNLLSLSHDSLTAAHLILEDGVSLNLFQMQQLQMLTL
Subjt: IALSVKLLPVSAVLSLNPLCCSPFRGDFDGDCLHGYVPQSLEARVEVRELVSLDRQLINGQSGRNLLSLSHDSLTAAHLILEDGVSLNLFQMQQLQMLTL
Query: HQLLPPAIVKSPLLRNCAWTGKQLFSILLPPDFEYSSPSHNVFIEKGELISSEGSYWLRDSGRNLFQALIEHCEGKTLDYLRDAQGL-----------VP
HQLLPPAIVKSPLLRNCAWTGKQLFSILLPPDFEYSSPSHNVFIEKGELISSEGSYWLRDSGRNLFQALIEHCEGKTLDYLRDAQG+ V
Subjt: HQLLPPAIVKSPLLRNCAWTGKQLFSILLPPDFEYSSPSHNVFIEKGELISSEGSYWLRDSGRNLFQALIEHCEGKTLDYLRDAQGL-----------VP
Query: LCGFILS------QNMMDDIFCGLQEAEETCNLKQLMVDSHKEILTGNDEDNQHLLSIAVEHLIYEKQKSAALNQASVDAFKKVFRDIQNLVHKYSGKDN
L LS +NMMDDIFCGLQEAEETCNLKQLMVDSHKEILTGNDEDNQHLLSIAVEHLIYEKQKSAALNQASVDAFKKVFRDIQNLVHKYSGKDN
Subjt: LCGFILS------QNMMDDIFCGLQEAEETCNLKQLMVDSHKEILTGNDEDNQHLLSIAVEHLIYEKQKSAALNQASVDAFKKVFRDIQNLVHKYSGKDN
Query: SLLTMFKAGSKGNLMKLVQHSMCLGLQHSLVTLSFSLPHKLSCSAWNSQKMPRYIQEDGLPDRTQSFIPYAVVENSFLSGLNPFECFAHSVTNRDSSFSD
SLLTMFKAGSKGNLMKLVQHSMCLGLQHSLVTLSFSLPHKLSCSAWNSQKMPRYIQEDGLPDRTQSFIPYAVVENSFLSGLNPFECFAHSVTNRDSSFSD
Subjt: SLLTMFKAGSKGNLMKLVQHSMCLGLQHSLVTLSFSLPHKLSCSAWNSQKMPRYIQEDGLPDRTQSFIPYAVVENSFLSGLNPFECFAHSVTNRDSSFSD
Query: NAEVPGTLTRKLTFLMRDIYTAYDGTVRNAYGNQLVQFCYDIDRPTSVSSESDSENNRDRDIGGHPVGSLAACAFSEAAYSALDQPISLLEASPLLNLKR
NAEVPGTLTRKLTFLMRDIYTAYDGTVRNAYGNQLVQFCYDIDRPTSVSSESDSENNRDRDIGGHPVGSLAACAFSEAAYSALDQPISLLEASPLLNLKR
Subjt: NAEVPGTLTRKLTFLMRDIYTAYDGTVRNAYGNQLVQFCYDIDRPTSVSSESDSENNRDRDIGGHPVGSLAACAFSEAAYSALDQPISLLEASPLLNLKR
Query: VLECGSKRNSTKQTFSLFLSEKLSKRSYGFEYGALGVKNHLERVMFKDIVSSVMIIFSPQPSRKKHFSPWVCHFHVCKDILKKRRLKMNSVIHSLNMRCD
VLECGSKRNSTKQTFSLFLSEKLSKRSYGFEYGALGVKNHLERVMFKDIVSSVMIIFSPQPSRKKHFSPWVCHFHVCKDILKKRRLKMNSVIHSLNMRCD
Subjt: VLECGSKRNSTKQTFSLFLSEKLSKRSYGFEYGALGVKNHLERVMFKDIVSSVMIIFSPQPSRKKHFSPWVCHFHVCKDILKKRRLKMNSVIHSLNMRCD
Query: SVRQEGRMNLPSLQIITQDCPLADSLTEDGDTVCLT-----------------------------------IDRVDITWNDRPKVPKPRCSHGELYLRVT
SVRQEGRMNLPSLQIITQDCPLADSLTEDGDTVCLT IDRVDITWNDRPKVPKPRCSHGELYLRVT
Subjt: SVRQEGRMNLPSLQIITQDCPLADSLTEDGDTVCLT-----------------------------------IDRVDITWNDRPKVPKPRCSHGELYLRVT
Query: MSGEGNSRFWATLINNCLPIMDLIDWTRSHPDNTHSLCLAYGIDSGWKYFLNSLECATLDIGKTIRLEHLLLVANSLSATGEFVGLNVKGLTHQREHALV
MSGEGNSRFWATLINNCLPIMDLIDWTRSHPDNTHSLCLAYGIDSGWKYFLNSLECATLDIGKTIRLEHLLLVANSLSATGEFVGLNVKGLTHQREHALV
Subjt: MSGEGNSRFWATLINNCLPIMDLIDWTRSHPDNTHSLCLAYGIDSGWKYFLNSLECATLDIGKTIRLEHLLLVANSLSATGEFVGLNVKGLTHQREHALV
Query: KTPFMQACFSSPGACLIKAAKAGIKDNLSGSLDALAWGRMPSLGTGGQFDILYSGKGHELNKPVDVYNLLGGQSTCEKQNAKIESVDKNNISEKYSAQLV
KTPFMQACFSSPGACLIKAAKAGIKDNLSGSLDALAWGRMPSLGTGGQFDILYSGKGHELNKPVDVYNLLGGQSTCEKQNAKIESVDKNNISEKYSAQLV
Subjt: KTPFMQACFSSPGACLIKAAKAGIKDNLSGSLDALAWGRMPSLGTGGQFDILYSGKGHELNKPVDVYNLLGGQSTCEKQNAKIESVDKNNISEKYSAQLV
Query: LKNGGSTIKGLKR----------KFLTLNDIQKLSFALRTILHKYSLNERLNEVDKSTLMMALYFHPHRDEKIGVGAQDIKVGSHSKYQNTRCFVLIRSD
LKNGGSTIKGLKR KFLTLNDIQKLSFALRTILHKYSLNERLNEVDKSTLMMALYFHPHRDEKIGVGAQDIKVGSHSKYQNTRCFVLIRSD
Subjt: LKNGGSTIKGLKR----------KFLTLNDIQKLSFALRTILHKYSLNERLNEVDKSTLMMALYFHPHRDEKIGVGAQDIKVGSHSKYQNTRCFVLIRSD
Query: GTTEDFSYHKCVLGALEIIAPHRVKGYQSKWMQEKFE
GTTEDFSYHKCVLGALEIIAPHRVKGYQSKWMQEKFE
Subjt: GTTEDFSYHKCVLGALEIIAPHRVKGYQSKWMQEKFE
|
|
| XP_011650447.1 DNA-directed RNA polymerase IV subunit 1 isoform X1 [Cucumis sativus] | 0.0 | 89.49 | Show/hide |
Query: MRFKLSTTDMFKKSMIMVEVKENMSKKYQKRVAKGGLPSDYWDFIPKDEQQEESYCRPNRKILTHAQ-----------FLKKFVPAIDSLFLNSFPVTPN
MRFKLSTTDMFKKSMIMVEVKENMSKKYQKRVAKGGLPSDYWDFIPKDEQQEESYCRPNRKILTHAQ FLKKFVPAIDSLFLNSFPVTPN
Subjt: MRFKLSTTDMFKKSMIMVEVKENMSKKYQKRVAKGGLPSDYWDFIPKDEQQEESYCRPNRKILTHAQ-----------FLKKFVPAIDSLFLNSFPVTPN
Query: SHRVTEMAHSFSNGQRLIFDERTRAYKKVVDFRGTANELGSRVLDCLKISK-------------------DTATSSSGLRWIKDVVLGKRSDHCFRMVVV
SHRVTEMAHSFSNGQRLIFDERTRAYKKVVDFRGTANELGSRVLDCLKISK DTATSSSGLRWIKDVVLGKRSDHCFRMVVV
Subjt: SHRVTEMAHSFSNGQRLIFDERTRAYKKVVDFRGTANELGSRVLDCLKISK-------------------DTATSSSGLRWIKDVVLGKRSDHCFRMVVV
Query: GDPNIELSEIGIPCHVAERLQISEHLSSWNMKKL------------KIYVRREGRLVRVRNVLELNMGDTIYRPLADGDVVLVNRPPSIHQHSLIALSVK
GDPNIELSEIGIPCHVAERLQISEHLSSWNMKKL +IYVRREGRLVRVRNVLELNMGDTIYRPLADGD+VLVNRPPSIHQHSLIALSVK
Subjt: GDPNIELSEIGIPCHVAERLQISEHLSSWNMKKL------------KIYVRREGRLVRVRNVLELNMGDTIYRPLADGDVVLVNRPPSIHQHSLIALSVK
Query: LLPVSAVLSLNPLCCSPFRGDFDGDCLHGYVPQSLEARVEVRELVSLDRQLINGQSGRNLLSLSHDSLTAAHLILEDGVSLNLFQMQQLQMLTLHQLLPP
LLPVSAVLSLNPLCCSPFRGDFDGDCLHGYVPQSLEARVEVRELVSLD+QL NGQSGRNLLSLSHDSLTAAHLILEDGVSLNLFQMQQLQMLTLHQLLPP
Subjt: LLPVSAVLSLNPLCCSPFRGDFDGDCLHGYVPQSLEARVEVRELVSLDRQLINGQSGRNLLSLSHDSLTAAHLILEDGVSLNLFQMQQLQMLTLHQLLPP
Query: AIVKSPLLRNCAWTGKQLFSILLPPDFEYSSPSHNVFIEKGELISSEGSYWLRDSGRNLFQALIEHCEGKTLDYLRDAQGL-----------VPLCGFIL
AIVKSPLLRNCAWTGKQLFSILLPPDF+YSSPSHNVFIEKGELISSEGSYWLRDSGRNLFQALIEHCEGKTLDYLRDAQG+ V L L
Subjt: AIVKSPLLRNCAWTGKQLFSILLPPDFEYSSPSHNVFIEKGELISSEGSYWLRDSGRNLFQALIEHCEGKTLDYLRDAQGL-----------VPLCGFIL
Query: S------QNMMDDIFCGLQEAEETCNLKQLMVDSHKEILTGNDEDNQHLLSIAVEHLIYEKQKSAALNQASVDAFKKVFRDIQNLVHKYSGKDNSLLTMF
S +NMMDDIFCGLQEAEETCNLKQLMVDSHKEIL GNDEDNQHLLSIAVE LIYEKQKSAALNQASVDAFKKVFRDIQNLV+KYSGKDNSLLTMF
Subjt: S------QNMMDDIFCGLQEAEETCNLKQLMVDSHKEILTGNDEDNQHLLSIAVEHLIYEKQKSAALNQASVDAFKKVFRDIQNLVHKYSGKDNSLLTMF
Query: KAGSKGNLMKLVQHSMCLGLQHSLVTLSFSLPHKLSCSAWNSQKMPRYIQEDGLPDRTQSFIPYAVVENSFLSGLNPFECFAHSVTNRDSSFSDNAEVPG
KAGSKGNLMKLVQHSMCLGLQHSLVTLSFSLPHKLSC+AWNSQKMPRYIQ+DGLPDRTQSFIPYAVVENSFLSGLNPFECFAHSVTNRDSSFSDNAEVPG
Subjt: KAGSKGNLMKLVQHSMCLGLQHSLVTLSFSLPHKLSCSAWNSQKMPRYIQEDGLPDRTQSFIPYAVVENSFLSGLNPFECFAHSVTNRDSSFSDNAEVPG
Query: TLTRKLTFLMRDIYTAYDGTVRNAYGNQLVQFCYDIDRPTSVSSESDSENN-RDRDIGGHPVGSLAACAFSEAAYSALDQPISLLEASPLLNLKRVLECG
TLTRKLTFLMRDIYTAYDGTVRNAYGNQLVQFCYDIDRPTS ES+SENN RDR IGGHPVGSLAACA SEAAYSALDQPISLLEASPLLNLKRVLECG
Subjt: TLTRKLTFLMRDIYTAYDGTVRNAYGNQLVQFCYDIDRPTSVSSESDSENN-RDRDIGGHPVGSLAACAFSEAAYSALDQPISLLEASPLLNLKRVLECG
Query: SKRNSTKQTFSLFLSEKLSKRSYGFEYGALGVKNHLERVMFKDIVSSVMIIFSPQPSRKKHFSPWVCHFHVCKDILKKRRLKMNSVIHSLNMRCDSVRQE
SKRNSTKQTFSLFLSEKLSKRSYGFEYGALGVKNHLERVMFKDIVSSVMIIFSP PSRKKHFSPWVCHFHVCK+ILKKRRLKMNSVIHSLNMRCDS+RQE
Subjt: SKRNSTKQTFSLFLSEKLSKRSYGFEYGALGVKNHLERVMFKDIVSSVMIIFSPQPSRKKHFSPWVCHFHVCKDILKKRRLKMNSVIHSLNMRCDSVRQE
Query: GRMNLPSLQIITQDCPLADSLTEDGDTVCLT-----------------------------------IDRVDITWNDRPKVPKPRCSHGELYLRVTMSGEG
GRMNLPSLQIITQDCPLADSLTEDGDTVCLT IDRVDITWNDRPKVPKPRCSHGELYLRVTMSGEG
Subjt: GRMNLPSLQIITQDCPLADSLTEDGDTVCLT-----------------------------------IDRVDITWNDRPKVPKPRCSHGELYLRVTMSGEG
Query: NSRFWATLINNCLPIMDLIDWTRSHPDNTHSLCLAYGIDSGWKYFLNSLECATLDIGKTIRLEHLLLVANSLSATGEFVGLNVKGLTHQREHALVKTPFM
NSRFWATL+NNCLPIMDLIDWTRSHPDNTHSLCLAYGIDSGWKYFLNSLE ATLD+GKTIRLEHLLLV+NSLSATGEFVGLNVKGLTHQREHALVKTPFM
Subjt: NSRFWATLINNCLPIMDLIDWTRSHPDNTHSLCLAYGIDSGWKYFLNSLECATLDIGKTIRLEHLLLVANSLSATGEFVGLNVKGLTHQREHALVKTPFM
Query: QACFSSPGACLIKAAKAGIKDNLSGSLDALAWGRMPSLGTGGQFDILYSGKGHELNKPVDVYNLLGGQSTCEKQNAKIESVDKNNISEKYSAQLVLKNGG
QACFSSPGAC+IKAAKAGIKDNLSGSLDALAWGRMPSLGTGGQFDILYSGKGHELNKPVDVYNLLGGQSTCEKQN KIES+DKN ISEKYSAQL+LKNGG
Subjt: QACFSSPGACLIKAAKAGIKDNLSGSLDALAWGRMPSLGTGGQFDILYSGKGHELNKPVDVYNLLGGQSTCEKQNAKIESVDKNNISEKYSAQLVLKNGG
Query: STIKGLKR----------KFLTLNDIQKLSFALRTILHKYSLNERLNEVDKSTLMMALYFHPHRDEKIGVGAQDIKVGSHSKYQNTRCFVLIRSDGTTED
STIKGLKR KFLTLNDIQKLSFALRTILHKYSLNERLNEVDKSTLMMALYFHPHRDEKIGVGAQDIKVGSHSKYQNTRCFVLIRSDGTTED
Subjt: STIKGLKR----------KFLTLNDIQKLSFALRTILHKYSLNERLNEVDKSTLMMALYFHPHRDEKIGVGAQDIKVGSHSKYQNTRCFVLIRSDGTTED
Query: FSYHKCVLGALEIIAPHRVKGYQSKWMQEKFE
FSYHKCVLGALEIIAPHRVKGYQSKWMQEKFE
Subjt: FSYHKCVLGALEIIAPHRVKGYQSKWMQEKFE
|
|
| XP_011650451.1 DNA-directed RNA polymerase IV subunit 1 isoform X2 [Cucumis sativus] | 0.0 | 89.49 | Show/hide |
Query: MRFKLSTTDMFKKSMIMVEVKENMSKKYQKRVAKGGLPSDYWDFIPKDEQQEESYCRPNRKILTHAQ-----------FLKKFVPAIDSLFLNSFPVTPN
MRFKLSTTDMFKKSMIMVEVKENMSKKYQKRVAKGGLPSDYWDFIPKDEQQEESYCRPNRKILTHAQ FLKKFVPAIDSLFLNSFPVTPN
Subjt: MRFKLSTTDMFKKSMIMVEVKENMSKKYQKRVAKGGLPSDYWDFIPKDEQQEESYCRPNRKILTHAQ-----------FLKKFVPAIDSLFLNSFPVTPN
Query: SHRVTEMAHSFSNGQRLIFDERTRAYKKVVDFRGTANELGSRVLDCLKISK-------------------DTATSSSGLRWIKDVVLGKRSDHCFRMVVV
SHRVTEMAHSFSNGQRLIFDERTRAYKKVVDFRGTANELGSRVLDCLKISK DTATSSSGLRWIKDVVLGKRSDHCFRMVVV
Subjt: SHRVTEMAHSFSNGQRLIFDERTRAYKKVVDFRGTANELGSRVLDCLKISK-------------------DTATSSSGLRWIKDVVLGKRSDHCFRMVVV
Query: GDPNIELSEIGIPCHVAERLQISEHLSSWNMKKL------------KIYVRREGRLVRVRNVLELNMGDTIYRPLADGDVVLVNRPPSIHQHSLIALSVK
GDPNIELSEIGIPCHVAERLQISEHLSSWNMKKL +IYVRREGRLVRVRNVLELNMGDTIYRPLADGD+VLVNRPPSIHQHSLIALSVK
Subjt: GDPNIELSEIGIPCHVAERLQISEHLSSWNMKKL------------KIYVRREGRLVRVRNVLELNMGDTIYRPLADGDVVLVNRPPSIHQHSLIALSVK
Query: LLPVSAVLSLNPLCCSPFRGDFDGDCLHGYVPQSLEARVEVRELVSLDRQLINGQSGRNLLSLSHDSLTAAHLILEDGVSLNLFQMQQLQMLTLHQLLPP
LLPVSAVLSLNPLCCSPFRGDFDGDCLHGYVPQSLEARVEVRELVSLD+QL NGQSGRNLLSLSHDSLTAAHLILEDGVSLNLFQMQQLQMLTLHQLLPP
Subjt: LLPVSAVLSLNPLCCSPFRGDFDGDCLHGYVPQSLEARVEVRELVSLDRQLINGQSGRNLLSLSHDSLTAAHLILEDGVSLNLFQMQQLQMLTLHQLLPP
Query: AIVKSPLLRNCAWTGKQLFSILLPPDFEYSSPSHNVFIEKGELISSEGSYWLRDSGRNLFQALIEHCEGKTLDYLRDAQGL-----------VPLCGFIL
AIVKSPLLRNCAWTGKQLFSILLPPDF+YSSPSHNVFIEKGELISSEGSYWLRDSGRNLFQALIEHCEGKTLDYLRDAQG+ V L L
Subjt: AIVKSPLLRNCAWTGKQLFSILLPPDFEYSSPSHNVFIEKGELISSEGSYWLRDSGRNLFQALIEHCEGKTLDYLRDAQGL-----------VPLCGFIL
Query: S------QNMMDDIFCGLQEAEETCNLKQLMVDSHKEILTGNDEDNQHLLSIAVEHLIYEKQKSAALNQASVDAFKKVFRDIQNLVHKYSGKDNSLLTMF
S +NMMDDIFCGLQEAEETCNLKQLMVDSHKEIL GNDEDNQHLLSIAVE LIYEKQKSAALNQASVDAFKKVFRDIQNLV+KYSGKDNSLLTMF
Subjt: S------QNMMDDIFCGLQEAEETCNLKQLMVDSHKEILTGNDEDNQHLLSIAVEHLIYEKQKSAALNQASVDAFKKVFRDIQNLVHKYSGKDNSLLTMF
Query: KAGSKGNLMKLVQHSMCLGLQHSLVTLSFSLPHKLSCSAWNSQKMPRYIQEDGLPDRTQSFIPYAVVENSFLSGLNPFECFAHSVTNRDSSFSDNAEVPG
KAGSKGNLMKLVQHSMCLGLQHSLVTLSFSLPHKLSC+AWNSQKMPRYIQ+DGLPDRTQSFIPYAVVENSFLSGLNPFECFAHSVTNRDSSFSDNAEVPG
Subjt: KAGSKGNLMKLVQHSMCLGLQHSLVTLSFSLPHKLSCSAWNSQKMPRYIQEDGLPDRTQSFIPYAVVENSFLSGLNPFECFAHSVTNRDSSFSDNAEVPG
Query: TLTRKLTFLMRDIYTAYDGTVRNAYGNQLVQFCYDIDRPTSVSSESDSENN-RDRDIGGHPVGSLAACAFSEAAYSALDQPISLLEASPLLNLKRVLECG
TLTRKLTFLMRDIYTAYDGTVRNAYGNQLVQFCYDIDRPTS ES+SENN RDR IGGHPVGSLAACA SEAAYSALDQPISLLEASPLLNLKRVLECG
Subjt: TLTRKLTFLMRDIYTAYDGTVRNAYGNQLVQFCYDIDRPTSVSSESDSENN-RDRDIGGHPVGSLAACAFSEAAYSALDQPISLLEASPLLNLKRVLECG
Query: SKRNSTKQTFSLFLSEKLSKRSYGFEYGALGVKNHLERVMFKDIVSSVMIIFSPQPSRKKHFSPWVCHFHVCKDILKKRRLKMNSVIHSLNMRCDSVRQE
SKRNSTKQTFSLFLSEKLSKRSYGFEYGALGVKNHLERVMFKDIVSSVMIIFSP PSRKKHFSPWVCHFHVCK+ILKKRRLKMNSVIHSLNMRCDS+RQE
Subjt: SKRNSTKQTFSLFLSEKLSKRSYGFEYGALGVKNHLERVMFKDIVSSVMIIFSPQPSRKKHFSPWVCHFHVCKDILKKRRLKMNSVIHSLNMRCDSVRQE
Query: GRMNLPSLQIITQDCPLADSLTEDGDTVCLT-----------------------------------IDRVDITWNDRPKVPKPRCSHGELYLRVTMSGEG
GRMNLPSLQIITQDCPLADSLTEDGDTVCLT IDRVDITWNDRPKVPKPRCSHGELYLRVTMSGEG
Subjt: GRMNLPSLQIITQDCPLADSLTEDGDTVCLT-----------------------------------IDRVDITWNDRPKVPKPRCSHGELYLRVTMSGEG
Query: NSRFWATLINNCLPIMDLIDWTRSHPDNTHSLCLAYGIDSGWKYFLNSLECATLDIGKTIRLEHLLLVANSLSATGEFVGLNVKGLTHQREHALVKTPFM
NSRFWATL+NNCLPIMDLIDWTRSHPDNTHSLCLAYGIDSGWKYFLNSLE ATLD+GKTIRLEHLLLV+NSLSATGEFVGLNVKGLTHQREHALVKTPFM
Subjt: NSRFWATLINNCLPIMDLIDWTRSHPDNTHSLCLAYGIDSGWKYFLNSLECATLDIGKTIRLEHLLLVANSLSATGEFVGLNVKGLTHQREHALVKTPFM
Query: QACFSSPGACLIKAAKAGIKDNLSGSLDALAWGRMPSLGTGGQFDILYSGKGHELNKPVDVYNLLGGQSTCEKQNAKIESVDKNNISEKYSAQLVLKNGG
QACFSSPGAC+IKAAKAGIKDNLSGSLDALAWGRMPSLGTGGQFDILYSGKGHELNKPVDVYNLLGGQSTCEKQN KIES+DKN ISEKYSAQL+LKNGG
Subjt: QACFSSPGACLIKAAKAGIKDNLSGSLDALAWGRMPSLGTGGQFDILYSGKGHELNKPVDVYNLLGGQSTCEKQNAKIESVDKNNISEKYSAQLVLKNGG
Query: STIKGLKR----------KFLTLNDIQKLSFALRTILHKYSLNERLNEVDKSTLMMALYFHPHRDEKIGVGAQDIKVGSHSKYQNTRCFVLIRSDGTTED
STIKGLKR KFLTLNDIQKLSFALRTILHKYSLNERLNEVDKSTLMMALYFHPHRDEKIGVGAQDIKVGSHSKYQNTRCFVLIRSDGTTED
Subjt: STIKGLKR----------KFLTLNDIQKLSFALRTILHKYSLNERLNEVDKSTLMMALYFHPHRDEKIGVGAQDIKVGSHSKYQNTRCFVLIRSDGTTED
Query: FSYHKCVLGALEIIAPHRVKGYQSKWMQEKFE
FSYHKCVLGALEIIAPHRVKGYQSKWMQEKFE
Subjt: FSYHKCVLGALEIIAPHRVKGYQSKWMQEKFE
|
|
| XP_016900630.1 PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase IV subunit 1 [Cucumis melo] | 0.0 | 90.9 | Show/hide |
Query: MRFKLSTTDMFKKSMIMVEVKENMSKKYQKRVAKGGLPSDYWDFIPKDEQQEESYCRPNRKILTHAQ-----------FLKKFVPAIDSLFLNSFPVTPN
MRFKLSTTDMFKKSMIMVEVKENMSKKYQKRVAKGGLPSDYWDFIPKDEQQEESYCRPNRKILTHAQ FLKKFVPAIDSLFLNSFPVTPN
Subjt: MRFKLSTTDMFKKSMIMVEVKENMSKKYQKRVAKGGLPSDYWDFIPKDEQQEESYCRPNRKILTHAQ-----------FLKKFVPAIDSLFLNSFPVTPN
Query: SHRVTEMAHSFSNGQRLIFDERTRAYKKVVDFRGTANELGSRVLDCLKISK-----------------------------DTATSSSGLRWIKDVVLGKR
SHRVTEMAHSFSNGQRLIFDERTRAYKKVVDFRGTANELGSRVLDCLKISK DTATSSSGLRWIKDVVLGKR
Subjt: SHRVTEMAHSFSNGQRLIFDERTRAYKKVVDFRGTANELGSRVLDCLKISK-----------------------------DTATSSSGLRWIKDVVLGKR
Query: SDHCFRMVVVGDPNIELSEIGIPCHVAERLQISEHLSSWNMKKL------------KIYVRREGRLVRVRNVLELNMGDTIYRPLADGDVVLVNRPPSIH
SDHCFRMVVVGDPNIELSEIGIPCHVAERLQISEHLSSWNMKKL +IYVRREGRLVRVRNVLELNMGDTIYRPLADGDVVLVNRPPSIH
Subjt: SDHCFRMVVVGDPNIELSEIGIPCHVAERLQISEHLSSWNMKKL------------KIYVRREGRLVRVRNVLELNMGDTIYRPLADGDVVLVNRPPSIH
Query: QHSLIALSVKLLPVSAVLSLNPLCCSPFRGDFDGDCLHGYVPQSLEARVEVRELVSLDRQLINGQSGRNLLSLSHDSLTAAHLILEDGVSLNLFQMQQLQ
QHSLIALSVKLLPVSAVLSLNPLCCSPFRGDFDGDCLHGYVPQSLEARVEVRELVSLDRQLINGQSGRNLLSLSHDSLTAAHLILEDGVSLNLFQMQQLQ
Subjt: QHSLIALSVKLLPVSAVLSLNPLCCSPFRGDFDGDCLHGYVPQSLEARVEVRELVSLDRQLINGQSGRNLLSLSHDSLTAAHLILEDGVSLNLFQMQQLQ
Query: MLTLHQLLPPAIVKSPLLRNCAWTGKQLFSILLPPDFEYSSPSHNVFIEKGELISSEGSYWLRDSGRNLFQALIEHCEGKTLDYLRDAQGL---------
MLTLHQLLPPAIVKSPLLRNCAWTGKQLFSILLPPDFEYSSPSHNVFIEKGELISSEGSYWLRDSGRNLFQALIEHCEGKTLDYLRDAQG+
Subjt: MLTLHQLLPPAIVKSPLLRNCAWTGKQLFSILLPPDFEYSSPSHNVFIEKGELISSEGSYWLRDSGRNLFQALIEHCEGKTLDYLRDAQGL---------
Query: --VPLCGFILS------QNMMDDIFCGLQEAEETCNLKQLMVDSHKEILTGNDEDNQHLLSIAVEHLIYEKQKSAALNQASVDAFKKVFRDIQNLVHKYS
V L LS +NMMDDIFCGLQEAEETCNLKQLMVDSHKEILTGNDEDNQHLLSIAVEHLIYEKQKSAALNQASVDAFKKVFRDIQNLVHKYS
Subjt: --VPLCGFILS------QNMMDDIFCGLQEAEETCNLKQLMVDSHKEILTGNDEDNQHLLSIAVEHLIYEKQKSAALNQASVDAFKKVFRDIQNLVHKYS
Query: GKDNSLLTMFKAGSKGNLMKLVQHSMCLGLQHSLVTLSFSLPHKLSCSAWNSQKMPRYIQEDGLPDRTQSFIPYAVVENSFLSGLNPFECFAHSVTNRDS
GKDNSLLTMFKAGSKGNLMKLVQHSMCLGLQHSLVTLSFSLPHKLSCSAWNSQKMPRYIQEDGLPDRTQSFIPYAVVENSFLSGLNPFECFAHSVTNRDS
Subjt: GKDNSLLTMFKAGSKGNLMKLVQHSMCLGLQHSLVTLSFSLPHKLSCSAWNSQKMPRYIQEDGLPDRTQSFIPYAVVENSFLSGLNPFECFAHSVTNRDS
Query: SFSDNAEVPGTLTRKLTFLMRDIYTAYDGTVRNAYGNQLVQFCYDIDRPTSVSSESDSENNRDRDIGGHPVGSLAACAFSEAAYSALDQPISLLEASPLL
SFSDNAEVPGTLTRKLTFLMRDIYTAYDGTVRNAYGNQLVQFCYDIDRPTSVSSESDSENNRDRDIGGHPVGSLAACAFSEAAYSALDQPISLLEASPLL
Subjt: SFSDNAEVPGTLTRKLTFLMRDIYTAYDGTVRNAYGNQLVQFCYDIDRPTSVSSESDSENNRDRDIGGHPVGSLAACAFSEAAYSALDQPISLLEASPLL
Query: NLKRVLECGSKRNSTKQTFSLFLSEKLSKRSYGFEYGALGVKNHLERVMFKDIVSSVMIIFSPQPSRKKHFSPWVCHFHVCKDILKKRRLKMNSVIHSLN
NLKRVLECGSKRNSTKQTFSLFLSEKLSKRSYGFEYGALGVKNHLERVMFKDIVSSVMIIFSPQPSRKKHFSPWVCHFHVCKDILKKRRLKMNSVIHSLN
Subjt: NLKRVLECGSKRNSTKQTFSLFLSEKLSKRSYGFEYGALGVKNHLERVMFKDIVSSVMIIFSPQPSRKKHFSPWVCHFHVCKDILKKRRLKMNSVIHSLN
Query: MRCDSVRQEGRMNLPSLQIITQDCPLADSLTEDGDTVCLT-----------------------------------IDRVDITWNDRPKVPKPRCSHGELY
MRCDSVRQEGRMNLPSLQIITQDCPLADSLTEDGDTVCLT IDRVDITWNDRPKVPKPRCSHGELY
Subjt: MRCDSVRQEGRMNLPSLQIITQDCPLADSLTEDGDTVCLT-----------------------------------IDRVDITWNDRPKVPKPRCSHGELY
Query: LRVTMSGEGNSRFWATLINNCLPIMDLIDWTRSHPDNTHSLCLAYGIDSGWKYFLNSLECATLDIGKTIRLEHLLLVANSLSATGEFVGLNVKGLTHQRE
LRVTMSGEGNSRFWATLINNCLPIMDLIDWTRSHPDNTHSLCLAYGIDSGWKYFLNSLECATLDIGKTIRLEHLLLVANSLSATGEFVGLNVKGLTHQRE
Subjt: LRVTMSGEGNSRFWATLINNCLPIMDLIDWTRSHPDNTHSLCLAYGIDSGWKYFLNSLECATLDIGKTIRLEHLLLVANSLSATGEFVGLNVKGLTHQRE
Query: HALVKTPFMQACFSSPGACLIKAAKAGIKDNLSGSLDALAWGRMPSLGTGGQFDILYSGKGHELNKPVDVYNLLGGQSTCEKQNAKIESVDKNNISEKYS
HALVKTPFMQACFSSPGACLIKAAKAGIKDNLSGSLDALAWGRMPSLGTGGQFDILYSGKGHELNKPVDVYNLLGGQSTCEKQNAKIESVDKNNISEKYS
Subjt: HALVKTPFMQACFSSPGACLIKAAKAGIKDNLSGSLDALAWGRMPSLGTGGQFDILYSGKGHELNKPVDVYNLLGGQSTCEKQNAKIESVDKNNISEKYS
Query: AQLVLKNGGSTIKGLKR----------KFLTLNDIQKLSFALRTILHKYSLNERLNEVDKSTLMMALYFHPHRDEKIGVGAQDIKVGSHSKYQNTRCFVL
AQLVLKNGGSTIKGLKR KFLTLNDIQKLSFALRTILHKYSLNERLNEVDKSTLMMALYFHPHRDEKIGVGAQDIKVGSHSKYQNTRCFVL
Subjt: AQLVLKNGGSTIKGLKR----------KFLTLNDIQKLSFALRTILHKYSLNERLNEVDKSTLMMALYFHPHRDEKIGVGAQDIKVGSHSKYQNTRCFVL
Query: IRSDGTTEDFSYHKCVLGALEIIAPHRVKGYQSKWMQEKFE
IRSDGTTEDFSYHKCVLGALEIIAPHRVKGYQSKWMQEKFE
Subjt: IRSDGTTEDFSYHKCVLGALEIIAPHRVKGYQSKWMQEKFE
|
|
| XP_038905043.1 DNA-directed RNA polymerase IV subunit 1 isoform X3 [Benincasa hispida] | 0.0 | 87.16 | Show/hide |
Query: MRFKLSTTDMFKKSMIMVEVKENMSKKYQKRVAKGGLPSDYWDFIPKDEQQEESYCRPNRKILTHAQ-----------FLKKFVPAIDSLFLNSFPVTPN
MRFKLSTTDMF+KSMIMVEVKENMSKKYQK+VAKGGLPSDYW+FIPKDEQQEESYCRPNRKILTHAQ FLKKFVPA DSLFLNSFPVTPN
Subjt: MRFKLSTTDMFKKSMIMVEVKENMSKKYQKRVAKGGLPSDYWDFIPKDEQQEESYCRPNRKILTHAQ-----------FLKKFVPAIDSLFLNSFPVTPN
Query: SHRVTEMAHSFSNGQRLIFDERTRAYKKVVDFRGTANELGSRVLDCLKISK-------------------DTATSSSGLRWIKDVVLGKRSDHCFRMVVV
SHRVTE+ HSFSNGQRLIFDERTRAYKKVVDFRGTANELGSR+LDCLKISK DTATSS GLRWIKDVVLGKRSDHCFRMVVV
Subjt: SHRVTEMAHSFSNGQRLIFDERTRAYKKVVDFRGTANELGSRVLDCLKISK-------------------DTATSSSGLRWIKDVVLGKRSDHCFRMVVV
Query: GDPNIELSEIGIPCHVAERLQISEHLSSWNMKKL------------KIYVRREGRLVRVRNVLELNMGDTIYRPLADGDVVLVNRPPSIHQHSLIALSVK
GDPNIELSEIGIPCHVAERLQISEHLSSWNMKKL +I+VRREGRLVRVRNVLELNMGDTIYRPLADGDVVLVNRPPSIHQHSLIAL VK
Subjt: GDPNIELSEIGIPCHVAERLQISEHLSSWNMKKL------------KIYVRREGRLVRVRNVLELNMGDTIYRPLADGDVVLVNRPPSIHQHSLIALSVK
Query: LLPVSAVLSLNPLCCSPFRGDFDGDCLHGYVPQSLEARVEVRELVSLDRQLINGQSGRNLLSLSHDSLTAAHLILEDGVSLNLFQMQQLQMLTLHQLLPP
LLPVS+VLSLNPLCCSPFRGDFDGDCLHGYVPQSLEARVEVRELVSLDRQLINGQSGRNLLSLSHDSLTAAHLI+EDGVSLN FQMQQLQML LHQLLPP
Subjt: LLPVSAVLSLNPLCCSPFRGDFDGDCLHGYVPQSLEARVEVRELVSLDRQLINGQSGRNLLSLSHDSLTAAHLILEDGVSLNLFQMQQLQMLTLHQLLPP
Query: AIVKSPLLRNCAWTGKQLFSILLPPDFEYSSPSHNVFIEKGELISSEGSYWLRDSGRNLFQALIEHCEGKTLDYLRDAQGL-----------VPLCGFIL
AIVK+PL RNCAWTGKQLFSILLPPDF+YSSPSHNVFI+ GELISSEGSYWLRDSGRNLFQALIEHCEGKTLDYL DAQG+ V L L
Subjt: AIVKSPLLRNCAWTGKQLFSILLPPDFEYSSPSHNVFIEKGELISSEGSYWLRDSGRNLFQALIEHCEGKTLDYLRDAQGL-----------VPLCGFIL
Query: S------QNMMDDIFCGLQEAEETCNLKQLMVDSHKEILTGNDEDNQHLLSIAVEHLIYEKQKSAALNQASVDAFKKVFRDIQNLVHKYSGKDNSLLTMF
S +NMMDDIFCGLQEAEETCNLKQLMVDSHK+ILTGNDEDNQH+LSI +E LIYEKQKS ALNQASVDAFKKVFRDIQNLV+KYSGKDNSLLTMF
Subjt: S------QNMMDDIFCGLQEAEETCNLKQLMVDSHKEILTGNDEDNQHLLSIAVEHLIYEKQKSAALNQASVDAFKKVFRDIQNLVHKYSGKDNSLLTMF
Query: KAGSKGNLMKLVQHSMCLGLQHSLVTLSFSLPHKLSCSAWNSQKMPRYIQEDGLPDRTQSFIPYAVVENSFLSGLNPFECFAHSVTNRDSSFSDNAEVPG
KAGSKGNL+KLVQHSMCLGLQHSLV LSFSLPHKLSCSAWNSQKMPRYIQ+DGLPDRTQSFIPYAVVENSFLSGLNPFECFAHSVTNRDSSFSDNAEVPG
Subjt: KAGSKGNLMKLVQHSMCLGLQHSLVTLSFSLPHKLSCSAWNSQKMPRYIQEDGLPDRTQSFIPYAVVENSFLSGLNPFECFAHSVTNRDSSFSDNAEVPG
Query: TLTRKLTFLMRDIYTAYDGTVRNAYGNQLVQFCYDIDRPTSVSSESDSENN-RDRDIGGHPVGSLAACAFSEAAYSALDQPISLLEASPLLNLKRVLECG
TLTRKLTFLMRDIYTAYDGTVRNAYGNQLVQF YDIDRPTSVS+E DSENN +DRDIGGHPVGSLAACA SEAAYSALDQPISLLEASPLLNLKRVLECG
Subjt: TLTRKLTFLMRDIYTAYDGTVRNAYGNQLVQFCYDIDRPTSVSSESDSENN-RDRDIGGHPVGSLAACAFSEAAYSALDQPISLLEASPLLNLKRVLECG
Query: SKRNSTKQTFSLFLSEKLSKRSYGFEYGALGVKNHLERVMFKDIVSSVMIIFSPQPSRKKHFSPWVCHFHVCKDILKKRRLKMNSVIHSLNMRCDSVRQE
SKRNSTKQTFSLFLSEKLSKRSYGFEYGALGVKNHLERVMFKDIVS+VMIIFSPQPSRKKHFSPWVCHFHVCK+ILKKRRLKMNSVIHSLN+RCDSVRQE
Subjt: SKRNSTKQTFSLFLSEKLSKRSYGFEYGALGVKNHLERVMFKDIVSSVMIIFSPQPSRKKHFSPWVCHFHVCKDILKKRRLKMNSVIHSLNMRCDSVRQE
Query: GRMNLPSLQIITQDCPLADSLTEDGDTVCLT-----------------------------------IDRVDITWNDRPKVPKPRCSHGELYLRVTMSGEG
GRMNLPSLQII+QDCPLADS+ EDGDTVCLT IDRVDI WNDRPKVPKPRC+HGELYLRVTMSGEG
Subjt: GRMNLPSLQIITQDCPLADSLTEDGDTVCLT-----------------------------------IDRVDITWNDRPKVPKPRCSHGELYLRVTMSGEG
Query: NSRFWATLINNCLPIMDLIDWTRSHPDNTHSLCLAYGIDSGWKYFLNSLECATLDIGKTIRLEHLLLVANSLSATGEFVGLNVKGLTHQREHALVKTPFM
NSRFWATL+NNCLP+MDLIDW+RSHPDNTHSLCLAYGIDSGWKYFLNSL ATLDIGKTIRLEHLLL+ANSLSATGEFVGLNVKGL+HQREHALVKTPFM
Subjt: NSRFWATLINNCLPIMDLIDWTRSHPDNTHSLCLAYGIDSGWKYFLNSLECATLDIGKTIRLEHLLLVANSLSATGEFVGLNVKGLTHQREHALVKTPFM
Query: QACFSSPGACLIKAAKAGIKDNLSGSLDALAWGRMPSLGTGGQFDILYSGKGHELNKPVDVYNLLGGQSTCEKQNAKIESVDKNNISEKYSAQLVLKNGG
QACFSSPGAC +KAAKAG KDNLSGSLDALAWGR+PSLGTGGQFDILYSG+GHELNKPVDVYNLLGGQSTCEKQNAKI S+DKNNISEKYSAQLVLKNGG
Subjt: QACFSSPGACLIKAAKAGIKDNLSGSLDALAWGRMPSLGTGGQFDILYSGKGHELNKPVDVYNLLGGQSTCEKQNAKIESVDKNNISEKYSAQLVLKNGG
Query: STIKGLK----------RKFLTLNDIQKLSFALRTILHKYSLNERLNEVDKSTLMMALYFHPHRDEKIGVGAQDIKVGSHSKYQNTRCFVLIRSDGTTED
STIKGLK R+FLTLNDIQKLSFALRTILHKYSLNERLNEVDKSTLMMALYFHPHRDEKIGVGAQDIKVGSHSKYQNTRCFVLIRSDGTTED
Subjt: STIKGLK----------RKFLTLNDIQKLSFALRTILHKYSLNERLNEVDKSTLMMALYFHPHRDEKIGVGAQDIKVGSHSKYQNTRCFVLIRSDGTTED
Query: FSYHKCVLGALEIIAPHRVKGYQSKWMQEKFE
FSYHKCVLGALEIIAPHRVKGYQSKWMQEKFE
Subjt: FSYHKCVLGALEIIAPHRVKGYQSKWMQEKFE
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0L2L4 DNA-directed RNA polymerase | 0.0e+00 | 89.49 | Show/hide |
Query: MRFKLSTTDMFKKSMIMVEVKENMSKKYQKRVAKGGLPSDYWDFIPKDEQQEESYCRPNRKILTHAQ-----------FLKKFVPAIDSLFLNSFPVTPN
MRFKLSTTDMFKKSMIMVEVKENMSKKYQKRVAKGGLPSDYWDFIPKDEQQEESYCRPNRKILTHAQ FLKKFVPAIDSLFLNSFPVTPN
Subjt: MRFKLSTTDMFKKSMIMVEVKENMSKKYQKRVAKGGLPSDYWDFIPKDEQQEESYCRPNRKILTHAQ-----------FLKKFVPAIDSLFLNSFPVTPN
Query: SHRVTEMAHSFSNGQRLIFDERTRAYKKVVDFRGTANELGSRVLDCLKIS-------------------KDTATSSSGLRWIKDVVLGKRSDHCFRMVVV
SHRVTEMAHSFSNGQRLIFDERTRAYKKVVDFRGTANELGSRVLDCLKIS KDTATSSSGLRWIKDVVLGKRSDHCFRMVVV
Subjt: SHRVTEMAHSFSNGQRLIFDERTRAYKKVVDFRGTANELGSRVLDCLKIS-------------------KDTATSSSGLRWIKDVVLGKRSDHCFRMVVV
Query: GDPNIELSEIGIPCHVAERLQISEHLSSWNMKKL------------KIYVRREGRLVRVRNVLELNMGDTIYRPLADGDVVLVNRPPSIHQHSLIALSVK
GDPNIELSEIGIPCHVAERLQISEHLSSWNMKKL +IYVRREGRLVRVRNVLELNMGDTIYRPLADGD+VLVNRPPSIHQHSLIALSVK
Subjt: GDPNIELSEIGIPCHVAERLQISEHLSSWNMKKL------------KIYVRREGRLVRVRNVLELNMGDTIYRPLADGDVVLVNRPPSIHQHSLIALSVK
Query: LLPVSAVLSLNPLCCSPFRGDFDGDCLHGYVPQSLEARVEVRELVSLDRQLINGQSGRNLLSLSHDSLTAAHLILEDGVSLNLFQMQQLQMLTLHQLLPP
LLPVSAVLSLNPLCCSPFRGDFDGDCLHGYVPQSLEARVEVRELVSLD+QL NGQSGRNLLSLSHDSLTAAHLILEDGVSLNLFQMQQLQMLTLHQLLPP
Subjt: LLPVSAVLSLNPLCCSPFRGDFDGDCLHGYVPQSLEARVEVRELVSLDRQLINGQSGRNLLSLSHDSLTAAHLILEDGVSLNLFQMQQLQMLTLHQLLPP
Query: AIVKSPLLRNCAWTGKQLFSILLPPDFEYSSPSHNVFIEKGELISSEGSYWLRDSGRNLFQALIEHCEGKTLDYLRDAQGL-----------VPLCGFIL
AIVKSPLLRNCAWTGKQLFSILLPPDF+YSSPSHNVFIEKGELISSEGSYWLRDSGRNLFQALIEHCEGKTLDYLRDAQG+ V L L
Subjt: AIVKSPLLRNCAWTGKQLFSILLPPDFEYSSPSHNVFIEKGELISSEGSYWLRDSGRNLFQALIEHCEGKTLDYLRDAQGL-----------VPLCGFIL
Query: S------QNMMDDIFCGLQEAEETCNLKQLMVDSHKEILTGNDEDNQHLLSIAVEHLIYEKQKSAALNQASVDAFKKVFRDIQNLVHKYSGKDNSLLTMF
S +NMMDDIFCGLQEAEETCNLKQLMVDSHKEIL GNDEDNQHLLSIAVE LIYEKQKSAALNQASVDAFKKVFRDIQNLV+KYSGKDNSLLTMF
Subjt: S------QNMMDDIFCGLQEAEETCNLKQLMVDSHKEILTGNDEDNQHLLSIAVEHLIYEKQKSAALNQASVDAFKKVFRDIQNLVHKYSGKDNSLLTMF
Query: KAGSKGNLMKLVQHSMCLGLQHSLVTLSFSLPHKLSCSAWNSQKMPRYIQEDGLPDRTQSFIPYAVVENSFLSGLNPFECFAHSVTNRDSSFSDNAEVPG
KAGSKGNLMKLVQHSMCLGLQHSLVTLSFSLPHKLSC+AWNSQKMPRYIQ+DGLPDRTQSFIPYAVVENSFLSGLNPFECFAHSVTNRDSSFSDNAEVPG
Subjt: KAGSKGNLMKLVQHSMCLGLQHSLVTLSFSLPHKLSCSAWNSQKMPRYIQEDGLPDRTQSFIPYAVVENSFLSGLNPFECFAHSVTNRDSSFSDNAEVPG
Query: TLTRKLTFLMRDIYTAYDGTVRNAYGNQLVQFCYDIDRPTSVSSESDSE-NNRDRDIGGHPVGSLAACAFSEAAYSALDQPISLLEASPLLNLKRVLECG
TLTRKLTFLMRDIYTAYDGTVRNAYGNQLVQFCYDIDRPT SES+SE NNRDR IGGHPVGSLAACA SEAAYSALDQPISLLEASPLLNLKRVLECG
Subjt: TLTRKLTFLMRDIYTAYDGTVRNAYGNQLVQFCYDIDRPTSVSSESDSE-NNRDRDIGGHPVGSLAACAFSEAAYSALDQPISLLEASPLLNLKRVLECG
Query: SKRNSTKQTFSLFLSEKLSKRSYGFEYGALGVKNHLERVMFKDIVSSVMIIFSPQPSRKKHFSPWVCHFHVCKDILKKRRLKMNSVIHSLNMRCDSVRQE
SKRNSTKQTFSLFLSEKLSKRSYGFEYGALGVKNHLERVMFKDIVSSVMIIFSP PSRKKHFSPWVCHFHVCK+ILKKRRLKMNSVIHSLNMRCDS+RQE
Subjt: SKRNSTKQTFSLFLSEKLSKRSYGFEYGALGVKNHLERVMFKDIVSSVMIIFSPQPSRKKHFSPWVCHFHVCKDILKKRRLKMNSVIHSLNMRCDSVRQE
Query: GRMNLPSLQIITQDCPLADSLTEDGDTVCLT-----------------------------------IDRVDITWNDRPKVPKPRCSHGELYLRVTMSGEG
GRMNLPSLQIITQDCPLADSLTEDGDTVCLT IDRVDITWNDRPKVPKPRCSHGELYLRVTMSGEG
Subjt: GRMNLPSLQIITQDCPLADSLTEDGDTVCLT-----------------------------------IDRVDITWNDRPKVPKPRCSHGELYLRVTMSGEG
Query: NSRFWATLINNCLPIMDLIDWTRSHPDNTHSLCLAYGIDSGWKYFLNSLECATLDIGKTIRLEHLLLVANSLSATGEFVGLNVKGLTHQREHALVKTPFM
NSRFWATL+NNCLPIMDLIDWTRSHPDNTHSLCLAYGIDSGWKYFLNSLE ATLD+GKTIRLEHLLLV+NSLSATGEFVGLNVKGLTHQREHALVKTPFM
Subjt: NSRFWATLINNCLPIMDLIDWTRSHPDNTHSLCLAYGIDSGWKYFLNSLECATLDIGKTIRLEHLLLVANSLSATGEFVGLNVKGLTHQREHALVKTPFM
Query: QACFSSPGACLIKAAKAGIKDNLSGSLDALAWGRMPSLGTGGQFDILYSGKGHELNKPVDVYNLLGGQSTCEKQNAKIESVDKNNISEKYSAQLVLKNGG
QACFSSPGAC+IKAAKAGIKDNLSGSLDALAWGRMPSLGTGGQFDILYSGKGHELNKPVDVYNLLGGQSTCEKQN KIES+DKN ISEKYSAQL+LKNGG
Subjt: QACFSSPGACLIKAAKAGIKDNLSGSLDALAWGRMPSLGTGGQFDILYSGKGHELNKPVDVYNLLGGQSTCEKQNAKIESVDKNNISEKYSAQLVLKNGG
Query: STIKGLK----------RKFLTLNDIQKLSFALRTILHKYSLNERLNEVDKSTLMMALYFHPHRDEKIGVGAQDIKVGSHSKYQNTRCFVLIRSDGTTED
STIKGLK RKFLTLNDIQKLSFALRTILHKYSLNERLNEVDKSTLMMALYFHPHRDEKIGVGAQDIKVGSHSKYQNTRCFVLIRSDGTTED
Subjt: STIKGLK----------RKFLTLNDIQKLSFALRTILHKYSLNERLNEVDKSTLMMALYFHPHRDEKIGVGAQDIKVGSHSKYQNTRCFVLIRSDGTTED
Query: FSYHKCVLGALEIIAPHRVKGYQSKWMQEKFE
FSYHKCVLGALEIIAPHRVKGYQSKWMQEKFE
Subjt: FSYHKCVLGALEIIAPHRVKGYQSKWMQEKFE
|
|
| A0A1S4DY39 DNA-directed RNA polymerase | 0.0e+00 | 90.9 | Show/hide |
Query: MRFKLSTTDMFKKSMIMVEVKENMSKKYQKRVAKGGLPSDYWDFIPKDEQQEESYCRPNRKILTHAQ-----------FLKKFVPAIDSLFLNSFPVTPN
MRFKLSTTDMFKKSMIMVEVKENMSKKYQKRVAKGGLPSDYWDFIPKDEQQEESYCRPNRKILTHAQ FLKKFVPAIDSLFLNSFPVTPN
Subjt: MRFKLSTTDMFKKSMIMVEVKENMSKKYQKRVAKGGLPSDYWDFIPKDEQQEESYCRPNRKILTHAQ-----------FLKKFVPAIDSLFLNSFPVTPN
Query: SHRVTEMAHSFSNGQRLIFDERTRAYKKVVDFRGTANELGSRVLDCLKIS-----------------------------KDTATSSSGLRWIKDVVLGKR
SHRVTEMAHSFSNGQRLIFDERTRAYKKVVDFRGTANELGSRVLDCLKIS KDTATSSSGLRWIKDVVLGKR
Subjt: SHRVTEMAHSFSNGQRLIFDERTRAYKKVVDFRGTANELGSRVLDCLKIS-----------------------------KDTATSSSGLRWIKDVVLGKR
Query: SDHCFRMVVVGDPNIELSEIGIPCHVAERLQISEHLSSWNMKKL------------KIYVRREGRLVRVRNVLELNMGDTIYRPLADGDVVLVNRPPSIH
SDHCFRMVVVGDPNIELSEIGIPCHVAERLQISEHLSSWNMKKL +IYVRREGRLVRVRNVLELNMGDTIYRPLADGDVVLVNRPPSIH
Subjt: SDHCFRMVVVGDPNIELSEIGIPCHVAERLQISEHLSSWNMKKL------------KIYVRREGRLVRVRNVLELNMGDTIYRPLADGDVVLVNRPPSIH
Query: QHSLIALSVKLLPVSAVLSLNPLCCSPFRGDFDGDCLHGYVPQSLEARVEVRELVSLDRQLINGQSGRNLLSLSHDSLTAAHLILEDGVSLNLFQMQQLQ
QHSLIALSVKLLPVSAVLSLNPLCCSPFRGDFDGDCLHGYVPQSLEARVEVRELVSLDRQLINGQSGRNLLSLSHDSLTAAHLILEDGVSLNLFQMQQLQ
Subjt: QHSLIALSVKLLPVSAVLSLNPLCCSPFRGDFDGDCLHGYVPQSLEARVEVRELVSLDRQLINGQSGRNLLSLSHDSLTAAHLILEDGVSLNLFQMQQLQ
Query: MLTLHQLLPPAIVKSPLLRNCAWTGKQLFSILLPPDFEYSSPSHNVFIEKGELISSEGSYWLRDSGRNLFQALIEHCEGKTLDYLRDAQGL---------
MLTLHQLLPPAIVKSPLLRNCAWTGKQLFSILLPPDFEYSSPSHNVFIEKGELISSEGSYWLRDSGRNLFQALIEHCEGKTLDYLRDAQG+
Subjt: MLTLHQLLPPAIVKSPLLRNCAWTGKQLFSILLPPDFEYSSPSHNVFIEKGELISSEGSYWLRDSGRNLFQALIEHCEGKTLDYLRDAQGL---------
Query: --VPLCGFILS------QNMMDDIFCGLQEAEETCNLKQLMVDSHKEILTGNDEDNQHLLSIAVEHLIYEKQKSAALNQASVDAFKKVFRDIQNLVHKYS
V L LS +NMMDDIFCGLQEAEETCNLKQLMVDSHKEILTGNDEDNQHLLSIAVEHLIYEKQKSAALNQASVDAFKKVFRDIQNLVHKYS
Subjt: --VPLCGFILS------QNMMDDIFCGLQEAEETCNLKQLMVDSHKEILTGNDEDNQHLLSIAVEHLIYEKQKSAALNQASVDAFKKVFRDIQNLVHKYS
Query: GKDNSLLTMFKAGSKGNLMKLVQHSMCLGLQHSLVTLSFSLPHKLSCSAWNSQKMPRYIQEDGLPDRTQSFIPYAVVENSFLSGLNPFECFAHSVTNRDS
GKDNSLLTMFKAGSKGNLMKLVQHSMCLGLQHSLVTLSFSLPHKLSCSAWNSQKMPRYIQEDGLPDRTQSFIPYAVVENSFLSGLNPFECFAHSVTNRDS
Subjt: GKDNSLLTMFKAGSKGNLMKLVQHSMCLGLQHSLVTLSFSLPHKLSCSAWNSQKMPRYIQEDGLPDRTQSFIPYAVVENSFLSGLNPFECFAHSVTNRDS
Query: SFSDNAEVPGTLTRKLTFLMRDIYTAYDGTVRNAYGNQLVQFCYDIDRPTSVSSESDSENNRDRDIGGHPVGSLAACAFSEAAYSALDQPISLLEASPLL
SFSDNAEVPGTLTRKLTFLMRDIYTAYDGTVRNAYGNQLVQFCYDIDRPTSVSSESDSENNRDRDIGGHPVGSLAACAFSEAAYSALDQPISLLEASPLL
Subjt: SFSDNAEVPGTLTRKLTFLMRDIYTAYDGTVRNAYGNQLVQFCYDIDRPTSVSSESDSENNRDRDIGGHPVGSLAACAFSEAAYSALDQPISLLEASPLL
Query: NLKRVLECGSKRNSTKQTFSLFLSEKLSKRSYGFEYGALGVKNHLERVMFKDIVSSVMIIFSPQPSRKKHFSPWVCHFHVCKDILKKRRLKMNSVIHSLN
NLKRVLECGSKRNSTKQTFSLFLSEKLSKRSYGFEYGALGVKNHLERVMFKDIVSSVMIIFSPQPSRKKHFSPWVCHFHVCKDILKKRRLKMNSVIHSLN
Subjt: NLKRVLECGSKRNSTKQTFSLFLSEKLSKRSYGFEYGALGVKNHLERVMFKDIVSSVMIIFSPQPSRKKHFSPWVCHFHVCKDILKKRRLKMNSVIHSLN
Query: MRCDSVRQEGRMNLPSLQIITQDCPLADSLTEDGDTVCLT-----------------------------------IDRVDITWNDRPKVPKPRCSHGELY
MRCDSVRQEGRMNLPSLQIITQDCPLADSLTEDGDTVCLT IDRVDITWNDRPKVPKPRCSHGELY
Subjt: MRCDSVRQEGRMNLPSLQIITQDCPLADSLTEDGDTVCLT-----------------------------------IDRVDITWNDRPKVPKPRCSHGELY
Query: LRVTMSGEGNSRFWATLINNCLPIMDLIDWTRSHPDNTHSLCLAYGIDSGWKYFLNSLECATLDIGKTIRLEHLLLVANSLSATGEFVGLNVKGLTHQRE
LRVTMSGEGNSRFWATLINNCLPIMDLIDWTRSHPDNTHSLCLAYGIDSGWKYFLNSLECATLDIGKTIRLEHLLLVANSLSATGEFVGLNVKGLTHQRE
Subjt: LRVTMSGEGNSRFWATLINNCLPIMDLIDWTRSHPDNTHSLCLAYGIDSGWKYFLNSLECATLDIGKTIRLEHLLLVANSLSATGEFVGLNVKGLTHQRE
Query: HALVKTPFMQACFSSPGACLIKAAKAGIKDNLSGSLDALAWGRMPSLGTGGQFDILYSGKGHELNKPVDVYNLLGGQSTCEKQNAKIESVDKNNISEKYS
HALVKTPFMQACFSSPGACLIKAAKAGIKDNLSGSLDALAWGRMPSLGTGGQFDILYSGKGHELNKPVDVYNLLGGQSTCEKQNAKIESVDKNNISEKYS
Subjt: HALVKTPFMQACFSSPGACLIKAAKAGIKDNLSGSLDALAWGRMPSLGTGGQFDILYSGKGHELNKPVDVYNLLGGQSTCEKQNAKIESVDKNNISEKYS
Query: AQLVLKNGGSTIKGLK----------RKFLTLNDIQKLSFALRTILHKYSLNERLNEVDKSTLMMALYFHPHRDEKIGVGAQDIKVGSHSKYQNTRCFVL
AQLVLKNGGSTIKGLK RKFLTLNDIQKLSFALRTILHKYSLNERLNEVDKSTLMMALYFHPHRDEKIGVGAQDIKVGSHSKYQNTRCFVL
Subjt: AQLVLKNGGSTIKGLK----------RKFLTLNDIQKLSFALRTILHKYSLNERLNEVDKSTLMMALYFHPHRDEKIGVGAQDIKVGSHSKYQNTRCFVL
Query: IRSDGTTEDFSYHKCVLGALEIIAPHRVKGYQSKWMQEKFE
IRSDGTTEDFSYHKCVLGALEIIAPHRVKGYQSKWMQEKFE
Subjt: IRSDGTTEDFSYHKCVLGALEIIAPHRVKGYQSKWMQEKFE
|
|
| A0A5D3D780 DNA-directed RNA polymerase | 0.0e+00 | 91.17 | Show/hide |
Query: MRFKLSTTDMFKKSMIMVEVKENMSKKYQKRVAKGGLPSDYWDFIPKDEQQEESYCRPNRKILTHAQ-----------FLKKFVPAIDSLFLNSFPVTPN
MRFKLSTTDMFKKSMIMVEVKENMSKKYQKRVAKGGLPSDYWDFIPKDEQQEESYCRPNRKILTHAQ FLKKFVPAIDSLFLNSFPVTPN
Subjt: MRFKLSTTDMFKKSMIMVEVKENMSKKYQKRVAKGGLPSDYWDFIPKDEQQEESYCRPNRKILTHAQ-----------FLKKFVPAIDSLFLNSFPVTPN
Query: SHRVTEMAHSFSNGQRLIFDERTRAYKKVVDFRGTANELGSRVLDCLKIS-------------------------KDTATSSSGLRWIKDVVLGKRSDHC
SHRVTEMAHSFSNGQRLIFDERTRAYKKVVDFRGTANELGSRVLDCLKIS KDTATSSSGLRWIKDVVLGKRSDHC
Subjt: SHRVTEMAHSFSNGQRLIFDERTRAYKKVVDFRGTANELGSRVLDCLKIS-------------------------KDTATSSSGLRWIKDVVLGKRSDHC
Query: FRMVVVGDPNIELSEIGIPCHVAERLQISEHLSSWNMKKL------------KIYVRREGRLVRVRNVLELNMGDTIYRPLADGDVVLVNRPPSIHQHSL
FRMVVVGDPNIELSEIGIPCHVAERLQISEHLSSWNMKKL +IYVRREGRLVRVRNVLELNMGDTIYRPLADGDVVLVNRPPSIHQHSL
Subjt: FRMVVVGDPNIELSEIGIPCHVAERLQISEHLSSWNMKKL------------KIYVRREGRLVRVRNVLELNMGDTIYRPLADGDVVLVNRPPSIHQHSL
Query: IALSVKLLPVSAVLSLNPLCCSPFRGDFDGDCLHGYVPQSLEARVEVRELVSLDRQLINGQSGRNLLSLSHDSLTAAHLILEDGVSLNLFQMQQLQMLTL
IALSVKLLPVSAVLSLNPLCCSPFRGDFDGDCLHGYVPQSLEARVEVRELVSLDRQLINGQSGRNLLSLSHDSLTAAHLILEDGVSLNLFQMQQLQMLTL
Subjt: IALSVKLLPVSAVLSLNPLCCSPFRGDFDGDCLHGYVPQSLEARVEVRELVSLDRQLINGQSGRNLLSLSHDSLTAAHLILEDGVSLNLFQMQQLQMLTL
Query: HQLLPPAIVKSPLLRNCAWTGKQLFSILLPPDFEYSSPSHNVFIEKGELISSEGSYWLRDSGRNLFQALIEHCEGKTLDYLRDAQGL-----------VP
HQLLPPAIVKSPLLRNCAWTGKQLFSILLPPDFEYSSPSHNVFIEKGELISSEGSYWLRDSGRNLFQALIEHCEGKTLDYLRDAQG+ V
Subjt: HQLLPPAIVKSPLLRNCAWTGKQLFSILLPPDFEYSSPSHNVFIEKGELISSEGSYWLRDSGRNLFQALIEHCEGKTLDYLRDAQGL-----------VP
Query: LCGFILS------QNMMDDIFCGLQEAEETCNLKQLMVDSHKEILTGNDEDNQHLLSIAVEHLIYEKQKSAALNQASVDAFKKVFRDIQNLVHKYSGKDN
L LS +NMMDDIFCGLQEAEETCNLKQLMVDSHKEILTGNDEDNQHLLSIAVEHLIYEKQKSAALNQASVDAFKKVFRDIQNLVHKYSGKDN
Subjt: LCGFILS------QNMMDDIFCGLQEAEETCNLKQLMVDSHKEILTGNDEDNQHLLSIAVEHLIYEKQKSAALNQASVDAFKKVFRDIQNLVHKYSGKDN
Query: SLLTMFKAGSKGNLMKLVQHSMCLGLQHSLVTLSFSLPHKLSCSAWNSQKMPRYIQEDGLPDRTQSFIPYAVVENSFLSGLNPFECFAHSVTNRDSSFSD
SLLTMFKAGSKGNLMKLVQHSMCLGLQHSLVTLSFSLPHKLSCSAWNSQKMPRYIQEDGLPDRTQSFIPYAVVENSFLSGLNPFECFAHSVTNRDSSFSD
Subjt: SLLTMFKAGSKGNLMKLVQHSMCLGLQHSLVTLSFSLPHKLSCSAWNSQKMPRYIQEDGLPDRTQSFIPYAVVENSFLSGLNPFECFAHSVTNRDSSFSD
Query: NAEVPGTLTRKLTFLMRDIYTAYDGTVRNAYGNQLVQFCYDIDRPTSVSSESDSENNRDRDIGGHPVGSLAACAFSEAAYSALDQPISLLEASPLLNLKR
NAEVPGTLTRKLTFLMRDIYTAYDGTVRNAYGNQLVQFCYDIDRPTSVSSESDSENNRDRDIGGHPVGSLAACAFSEAAYSALDQPISLLEASPLLNLKR
Subjt: NAEVPGTLTRKLTFLMRDIYTAYDGTVRNAYGNQLVQFCYDIDRPTSVSSESDSENNRDRDIGGHPVGSLAACAFSEAAYSALDQPISLLEASPLLNLKR
Query: VLECGSKRNSTKQTFSLFLSEKLSKRSYGFEYGALGVKNHLERVMFKDIVSSVMIIFSPQPSRKKHFSPWVCHFHVCKDILKKRRLKMNSVIHSLNMRCD
VLECGSKRNSTKQTFSLFLSEKLSKRSYGFEYGALGVKNHLERVMFKDIVSSVMIIFSPQPSRKKHFSPWVCHFHVCKDILKKRRLKMNSVIHSLNMRCD
Subjt: VLECGSKRNSTKQTFSLFLSEKLSKRSYGFEYGALGVKNHLERVMFKDIVSSVMIIFSPQPSRKKHFSPWVCHFHVCKDILKKRRLKMNSVIHSLNMRCD
Query: SVRQEGRMNLPSLQIITQDCPLADSLTEDGDTVCLT-----------------------------------IDRVDITWNDRPKVPKPRCSHGELYLRVT
SVRQEGRMNLPSLQIITQDCPLADSLTEDGDTVCLT IDRVDITWNDRPKVPKPRCSHGELYLRVT
Subjt: SVRQEGRMNLPSLQIITQDCPLADSLTEDGDTVCLT-----------------------------------IDRVDITWNDRPKVPKPRCSHGELYLRVT
Query: MSGEGNSRFWATLINNCLPIMDLIDWTRSHPDNTHSLCLAYGIDSGWKYFLNSLECATLDIGKTIRLEHLLLVANSLSATGEFVGLNVKGLTHQREHALV
MSGEGNSRFWATLINNCLPIMDLIDWTRSHPDNTHSLCLAYGIDSGWKYFLNSLECATLDIGKTIRLEHLLLVANSLSATGEFVGLNVKGLTHQREHALV
Subjt: MSGEGNSRFWATLINNCLPIMDLIDWTRSHPDNTHSLCLAYGIDSGWKYFLNSLECATLDIGKTIRLEHLLLVANSLSATGEFVGLNVKGLTHQREHALV
Query: KTPFMQACFSSPGACLIKAAKAGIKDNLSGSLDALAWGRMPSLGTGGQFDILYSGKGHELNKPVDVYNLLGGQSTCEKQNAKIESVDKNNISEKYSAQLV
KTPFMQACFSSPGACLIKAAKAGIKDNLSGSLDALAWGRMPSLGTGGQFDILYSGKGHELNKPVDVYNLLGGQSTCEKQNAKIESVDKNNISEKYSAQLV
Subjt: KTPFMQACFSSPGACLIKAAKAGIKDNLSGSLDALAWGRMPSLGTGGQFDILYSGKGHELNKPVDVYNLLGGQSTCEKQNAKIESVDKNNISEKYSAQLV
Query: LKNGGSTIKGLK----------RKFLTLNDIQKLSFALRTILHKYSLNERLNEVDKSTLMMALYFHPHRDEKIGVGAQDIKVGSHSKYQNTRCFVLIRSD
LKNGGSTIKGLK RKFLTLNDIQKLSFALRTILHKYSLNERLNEVDKSTLMMALYFHPHRDEKIGVGAQDIKVGSHSKYQNTRCFVLIRSD
Subjt: LKNGGSTIKGLK----------RKFLTLNDIQKLSFALRTILHKYSLNERLNEVDKSTLMMALYFHPHRDEKIGVGAQDIKVGSHSKYQNTRCFVLIRSD
Query: GTTEDFSYHKCVLGALEIIAPHRVKGYQSKWMQEKFE
GTTEDFSYHKCVLGALEIIAPHRVKGYQSKWMQEKFE
Subjt: GTTEDFSYHKCVLGALEIIAPHRVKGYQSKWMQEKFE
|
|
| A0A6J1FF54 DNA-directed RNA polymerase | 0.0e+00 | 81.1 | Show/hide |
Query: MRFKLSTTDMFKKSMIMVEVKENMSKKYQKRVAKGGLPSDYWDFIPKDEQQEESYCRPNRKILTHAQ-----------FLKKFVPAIDSLFLNSFPVTPN
MRFKLSTTDMF+KSMIMVEVKENMSKKYQKRVA+GGLP DYW+FIPKDEQQEESYCRPNRK+LTHAQ FLKKFV A DSLFLNSFPVTPN
Subjt: MRFKLSTTDMFKKSMIMVEVKENMSKKYQKRVAKGGLPSDYWDFIPKDEQQEESYCRPNRKILTHAQ-----------FLKKFVPAIDSLFLNSFPVTPN
Query: SHRVTEMAHSFSNGQRLIFDERTRAYKKVVDFRGTANELGSRVLDCLKIS-------------------KDTATSSSGLRWIKDVVLGKRSDHCFRMVVV
HRVTEM HSFS+GQRL+FDERTRAYKK+VDFRGTANELGSRVLDCLKIS KDTATSS+GLRWIKDVVLGKRSDHCFRMVVV
Subjt: SHRVTEMAHSFSNGQRLIFDERTRAYKKVVDFRGTANELGSRVLDCLKIS-------------------KDTATSSSGLRWIKDVVLGKRSDHCFRMVVV
Query: GDPNIELSEIGIPCHVAERLQISEHLSSWNMKKL------------KIYVRREGRLVRVRNVLELNMGDTIYRPLADGDVVLVNRPPSIHQHSLIALSVK
GDPNIELSEIGIPCHVAERLQISEHLSSWNMKKL +I+VRREGRLVRVR+VLEL+MGDTIYRPLADGDVVLVNRPPSIHQHSLIALSV+
Subjt: GDPNIELSEIGIPCHVAERLQISEHLSSWNMKKL------------KIYVRREGRLVRVRNVLELNMGDTIYRPLADGDVVLVNRPPSIHQHSLIALSVK
Query: LLPVSAVLSLNPLCCSPFRGDFDGDCLHGYVPQSLEARVEVRELVSLDRQLINGQSGRNLLSLSHDSLTAAHLILEDGVSLNLFQMQQLQMLTLHQLLPP
+LPVS+VLSLNPLCCSPFRGDFDGDCLHGYVPQSLEARVE+RELV+LDRQL+NGQSGRNLLSLSHDSLTAAHLI+EDGVSLNLFQ+QQLQM LHQLLPP
Subjt: LLPVSAVLSLNPLCCSPFRGDFDGDCLHGYVPQSLEARVEVRELVSLDRQLINGQSGRNLLSLSHDSLTAAHLILEDGVSLNLFQMQQLQMLTLHQLLPP
Query: AIVKSPLLRNCAWTGKQLFSILLPPDFEYSSPSHNVFIEKGELISSEGSYWLRDSGRNLFQALIEHCEGKTLDYLRDAQ----------GL-VPLCGFIL
AIVK+P R+CAWTGKQLFSI LPPDF+YSSPSH V I+ GEL+SSEGSYWLRD+GRN FQALIEHCEG+TL+YL AQ GL V L L
Subjt: AIVKSPLLRNCAWTGKQLFSILLPPDFEYSSPSHNVFIEKGELISSEGSYWLRDSGRNLFQALIEHCEGKTLDYLRDAQ----------GL-VPLCGFIL
Query: S------QNMMDDIFCGLQEAEETCNLKQLMVDSHKEILTGNDEDNQHLLSIAVEHLIYEKQKSAALNQASVDAFKKVFRDIQNLVHKYSGKDNSLLTMF
S +NMMDDIFCGLQEAEETCNL QLMVDSHK++LTG+DE NQH+LSI VEHL YEKQKSAALNQASVDAFK+VFR+IQNLV+KYSGKDNSLLTMF
Subjt: S------QNMMDDIFCGLQEAEETCNLKQLMVDSHKEILTGNDEDNQHLLSIAVEHLIYEKQKSAALNQASVDAFKKVFRDIQNLVHKYSGKDNSLLTMF
Query: KAGSKGNLMKLVQHSMCLGLQHSLVTLSFSLPHKLSCSAWNSQKMPRYIQEDGLPDRTQSFIPYAVVENSFLSGLNPFECFAHSVTNRDSSFSDNAEVPG
KAGSKGNL+KLVQHSMCLGLQHSLVTLSF LPHKLSCS+WNSQKMPRYIQ+DGL DRTQSFIPYAVVENSFLSGLNPFECFAHSVTNRDSSFSDNAEVPG
Subjt: KAGSKGNLMKLVQHSMCLGLQHSLVTLSFSLPHKLSCSAWNSQKMPRYIQEDGLPDRTQSFIPYAVVENSFLSGLNPFECFAHSVTNRDSSFSDNAEVPG
Query: TLTRKLTFLMRDIYTAYDGTVRNAYGNQLVQFCYDIDRPTSVSSESDSENNR-DRDIGGHPVGSLAACAFSEAAYSALDQPISLLEASPLLNLKRVLECG
TLTRKLTFLMRDIY AYD TVRNAYGNQLVQF YD D P S S+E D ENN +RDIGG PVGSLAACA SEAAYSALDQPISLLE SPLLNLK+VLECG
Subjt: TLTRKLTFLMRDIYTAYDGTVRNAYGNQLVQFCYDIDRPTSVSSESDSENNR-DRDIGGHPVGSLAACAFSEAAYSALDQPISLLEASPLLNLKRVLECG
Query: SKRNSTKQTFSLFLSEKLSKRSYGFEYGALGVKNHLERVMFKDIVSSVMIIFSPQPSRKKHFSPWVCHFHVCKDILKKRRLKMNSVIHSLNMRCDSVRQE
SKRNS KQTFSLFL EKLSKRSYGFEYGALGVKNHLERV+FKDIVSSVMIIF+P+PSRK+HFSPWVCHFHVCK+ILKKRRLK++SVIHSLNMRCDSVRQE
Subjt: SKRNSTKQTFSLFLSEKLSKRSYGFEYGALGVKNHLERVMFKDIVSSVMIIFSPQPSRKKHFSPWVCHFHVCKDILKKRRLKMNSVIHSLNMRCDSVRQE
Query: GRMNLPSLQIITQDCPLADSLTEDGDTVCLT-----------------------------------IDRVDITWNDRPKVPKPRC-SHGELYLRVTMSGE
++NLP L I TQDC LADS EDGDTVCLT ID+VDI+WNDRPKVPKP C SHGELYLRVTMSGE
Subjt: GRMNLPSLQIITQDCPLADSLTEDGDTVCLT-----------------------------------IDRVDITWNDRPKVPKPRC-SHGELYLRVTMSGE
Query: GNSRFWATLINNCLPIMDLIDWTRSHPDNTHSLCLAYGIDSGWKYFLNSLECATLDIGKTIRLEHLLLVANSLSATGEFVGLNVKGLTHQREHALVKTPF
GNSRFWATL+N+CLPIMDLIDW+RSHPDN HS C+AYGIDSG YFLNSLE ATLDIGKTIR EHLLLVAN+LSATGEFVGLNVKG++ QREHALVKTPF
Subjt: GNSRFWATLINNCLPIMDLIDWTRSHPDNTHSLCLAYGIDSGWKYFLNSLECATLDIGKTIRLEHLLLVANSLSATGEFVGLNVKGLTHQREHALVKTPF
Query: MQACFSSPGACLIKAAKAGIKDNLSGSLDALAWGRMPSLGTGGQFDILYSGKGHELNKPVDVYNLLGGQSTCEKQNAKIESVDKNNISEKYSAQLVLKNG
MQACFSSPGA +KAAKAGIKD+LSGSLDALAWG++PS+GTGGQFDILYSGKGHELNKPVDVYNLLG Q CEK N KIES+DKN I EKYSA +V KNG
Subjt: MQACFSSPGACLIKAAKAGIKDNLSGSLDALAWGRMPSLGTGGQFDILYSGKGHELNKPVDVYNLLGGQSTCEKQNAKIESVDKNNISEKYSAQLVLKNG
Query: GSTIKGLK----------RKFLTLNDIQKLSFALRTILHKYSLNERLNEVDKSTLMMALYFHPHRDEKIGVGAQDIKVGSHSKYQNTRCFVLIRSDGTTE
GSTIKGLK R+FLTLNDIQKLS LR+IL KYSLNERLNEVDKSTLMMALYFHP RDEKIGVGAQDIKVGSHSKY NTRCF+L+RSDGTTE
Subjt: GSTIKGLK----------RKFLTLNDIQKLSFALRTILHKYSLNERLNEVDKSTLMMALYFHPHRDEKIGVGAQDIKVGSHSKYQNTRCFVLIRSDGTTE
Query: DFSYHKCVLGALEIIAPHRVKGYQSKWMQEKFE
DFSYHKCVLGALEIIAPHRVK YQSKWMQ+KFE
Subjt: DFSYHKCVLGALEIIAPHRVKGYQSKWMQEKFE
|
|
| A0A6J1FKU9 DNA-directed RNA polymerase | 0.0e+00 | 81.1 | Show/hide |
Query: MRFKLSTTDMFKKSMIMVEVKENMSKKYQKRVAKGGLPSDYWDFIPKDEQQEESYCRPNRKILTHAQ-----------FLKKFVPAIDSLFLNSFPVTPN
MRFKLSTTDMF+KSMIMVEVKENMSKKYQKRVA+GGLP DYW+FIPKDEQQEESYCRPNRK+LTHAQ FLKKFV A DSLFLNSFPVTPN
Subjt: MRFKLSTTDMFKKSMIMVEVKENMSKKYQKRVAKGGLPSDYWDFIPKDEQQEESYCRPNRKILTHAQ-----------FLKKFVPAIDSLFLNSFPVTPN
Query: SHRVTEMAHSFSNGQRLIFDERTRAYKKVVDFRGTANELGSRVLDCLKIS-------------------KDTATSSSGLRWIKDVVLGKRSDHCFRMVVV
HRVTEM HSFS+GQRL+FDERTRAYKK+VDFRGTANELGSRVLDCLKIS KDTATSS+GLRWIKDVVLGKRSDHCFRMVVV
Subjt: SHRVTEMAHSFSNGQRLIFDERTRAYKKVVDFRGTANELGSRVLDCLKIS-------------------KDTATSSSGLRWIKDVVLGKRSDHCFRMVVV
Query: GDPNIELSEIGIPCHVAERLQISEHLSSWNMKKL------------KIYVRREGRLVRVRNVLELNMGDTIYRPLADGDVVLVNRPPSIHQHSLIALSVK
GDPNIELSEIGIPCHVAERLQISEHLSSWNMKKL +I+VRREGRLVRVR+VLEL+MGDTIYRPLADGDVVLVNRPPSIHQHSLIALSV+
Subjt: GDPNIELSEIGIPCHVAERLQISEHLSSWNMKKL------------KIYVRREGRLVRVRNVLELNMGDTIYRPLADGDVVLVNRPPSIHQHSLIALSVK
Query: LLPVSAVLSLNPLCCSPFRGDFDGDCLHGYVPQSLEARVEVRELVSLDRQLINGQSGRNLLSLSHDSLTAAHLILEDGVSLNLFQMQQLQMLTLHQLLPP
+LPVS+VLSLNPLCCSPFRGDFDGDCLHGYVPQSLEARVE+RELV+LDRQL+NGQSGRNLLSLSHDSLTAAHLI+EDGVSLNLFQ+QQLQM LHQLLPP
Subjt: LLPVSAVLSLNPLCCSPFRGDFDGDCLHGYVPQSLEARVEVRELVSLDRQLINGQSGRNLLSLSHDSLTAAHLILEDGVSLNLFQMQQLQMLTLHQLLPP
Query: AIVKSPLLRNCAWTGKQLFSILLPPDFEYSSPSHNVFIEKGELISSEGSYWLRDSGRNLFQALIEHCEGKTLDYLRDAQ----------GL-VPLCGFIL
AIVK+P R+CAWTGKQLFSI LPPDF+YSSPSH V I+ GEL+SSEGSYWLRD+GRN FQALIEHCEG+TL+YL AQ GL V L L
Subjt: AIVKSPLLRNCAWTGKQLFSILLPPDFEYSSPSHNVFIEKGELISSEGSYWLRDSGRNLFQALIEHCEGKTLDYLRDAQ----------GL-VPLCGFIL
Query: S------QNMMDDIFCGLQEAEETCNLKQLMVDSHKEILTGNDEDNQHLLSIAVEHLIYEKQKSAALNQASVDAFKKVFRDIQNLVHKYSGKDNSLLTMF
S +NMMDDIFCGLQEAEETCNL QLMVDSHK++LTG+DE NQH+LSI VEHL YEKQKSAALNQASVDAFK+VFR+IQNLV+KYSGKDNSLLTMF
Subjt: S------QNMMDDIFCGLQEAEETCNLKQLMVDSHKEILTGNDEDNQHLLSIAVEHLIYEKQKSAALNQASVDAFKKVFRDIQNLVHKYSGKDNSLLTMF
Query: KAGSKGNLMKLVQHSMCLGLQHSLVTLSFSLPHKLSCSAWNSQKMPRYIQEDGLPDRTQSFIPYAVVENSFLSGLNPFECFAHSVTNRDSSFSDNAEVPG
KAGSKGNL+KLVQHSMCLGLQHSLVTLSF LPHKLSCS+WNSQKMPRYIQ+DGL DRTQSFIPYAVVENSFLSGLNPFECFAHSVTNRDSSFSDNAEVPG
Subjt: KAGSKGNLMKLVQHSMCLGLQHSLVTLSFSLPHKLSCSAWNSQKMPRYIQEDGLPDRTQSFIPYAVVENSFLSGLNPFECFAHSVTNRDSSFSDNAEVPG
Query: TLTRKLTFLMRDIYTAYDGTVRNAYGNQLVQFCYDIDRPTSVSSESDSENNR-DRDIGGHPVGSLAACAFSEAAYSALDQPISLLEASPLLNLKRVLECG
TLTRKLTFLMRDIY AYD TVRNAYGNQLVQF YD D P S S+E D ENN +RDIGG PVGSLAACA SEAAYSALDQPISLLE SPLLNLK+VLECG
Subjt: TLTRKLTFLMRDIYTAYDGTVRNAYGNQLVQFCYDIDRPTSVSSESDSENNR-DRDIGGHPVGSLAACAFSEAAYSALDQPISLLEASPLLNLKRVLECG
Query: SKRNSTKQTFSLFLSEKLSKRSYGFEYGALGVKNHLERVMFKDIVSSVMIIFSPQPSRKKHFSPWVCHFHVCKDILKKRRLKMNSVIHSLNMRCDSVRQE
SKRNS KQTFSLFL EKLSKRSYGFEYGALGVKNHLERV+FKDIVSSVMIIF+P+PSRK+HFSPWVCHFHVCK+ILKKRRLK++SVIHSLNMRCDSVRQE
Subjt: SKRNSTKQTFSLFLSEKLSKRSYGFEYGALGVKNHLERVMFKDIVSSVMIIFSPQPSRKKHFSPWVCHFHVCKDILKKRRLKMNSVIHSLNMRCDSVRQE
Query: GRMNLPSLQIITQDCPLADSLTEDGDTVCLT-----------------------------------IDRVDITWNDRPKVPKPRC-SHGELYLRVTMSGE
++NLP L I TQDC LADS EDGDTVCLT ID+VDI+WNDRPKVPKP C SHGELYLRVTMSGE
Subjt: GRMNLPSLQIITQDCPLADSLTEDGDTVCLT-----------------------------------IDRVDITWNDRPKVPKPRC-SHGELYLRVTMSGE
Query: GNSRFWATLINNCLPIMDLIDWTRSHPDNTHSLCLAYGIDSGWKYFLNSLECATLDIGKTIRLEHLLLVANSLSATGEFVGLNVKGLTHQREHALVKTPF
GNSRFWATL+N+CLPIMDLIDW+RSHPDN HS C+AYGIDSG YFLNSLE ATLDIGKTIR EHLLLVAN+LSATGEFVGLNVKG++ QREHALVKTPF
Subjt: GNSRFWATLINNCLPIMDLIDWTRSHPDNTHSLCLAYGIDSGWKYFLNSLECATLDIGKTIRLEHLLLVANSLSATGEFVGLNVKGLTHQREHALVKTPF
Query: MQACFSSPGACLIKAAKAGIKDNLSGSLDALAWGRMPSLGTGGQFDILYSGKGHELNKPVDVYNLLGGQSTCEKQNAKIESVDKNNISEKYSAQLVLKNG
MQACFSSPGA +KAAKAGIKD+LSGSLDALAWG++PS+GTGGQFDILYSGKGHELNKPVDVYNLLG Q CEK N KIES+DKN I EKYSA +V KNG
Subjt: MQACFSSPGACLIKAAKAGIKDNLSGSLDALAWGRMPSLGTGGQFDILYSGKGHELNKPVDVYNLLGGQSTCEKQNAKIESVDKNNISEKYSAQLVLKNG
Query: GSTIKGLK----------RKFLTLNDIQKLSFALRTILHKYSLNERLNEVDKSTLMMALYFHPHRDEKIGVGAQDIKVGSHSKYQNTRCFVLIRSDGTTE
GSTIKGLK R+FLTLNDIQKLS LR+IL KYSLNERLNEVDKSTLMMALYFHP RDEKIGVGAQDIKVGSHSKY NTRCF+L+RSDGTTE
Subjt: GSTIKGLK----------RKFLTLNDIQKLSFALRTILHKYSLNERLNEVDKSTLMMALYFHPHRDEKIGVGAQDIKVGSHSKYQNTRCFVLIRSDGTTE
Query: DFSYHKCVLGALEIIAPHRVKGYQSKWMQEKFE
DFSYHKCVLGALEIIAPHRVK YQSKWMQ+KFE
Subjt: DFSYHKCVLGALEIIAPHRVKGYQSKWMQEKFE
|
|
| SwissProt top hits | e value | %identity | Alignment |
|---|
| P17545 DNA-directed RNA polymerase II subunit RPB1-B | 1.2e-47 | 26.54 | Show/hide |
Query: SRVLDCLKISKDTATSSSGLRWIKDVVLGKRSDHCFRMVVVGDPNIELSEIGIPCHVAERLQISEHLSSWNMKKLKIYVRR-----------------EG
++V D K+ T ++ ++GKR D R V+ GDPNI++ E+G+P VA L E +++ N K+L + RR +
Subjt: SRVLDCLKISKDTATSSSGLRWIKDVVLGKRSDHCFRMVVVGDPNIELSEIGIPCHVAERLQISEHLSSWNMKKLKIYVRR-----------------EG
Query: RLVRVRNVLELNMGDTIYRPLADGDVVLVNRPPSIHQHSLIALSVKLLPVSAVLSLNPLCCSPFRGDFDGDCLHGYVPQSLEARVEVRELVSLDRQLING
L+R R+ + LN+GD + R + +GDVVL NR P++H+ S++ V++L + LN C +P+ DFDGD ++ +VPQSL + E+ E++ + + ++
Subjt: RLVRVRNVLELNMGDTIYRPLADGDVVLVNRPPSIHQHSLIALSVKLLPVSAVLSLNPLCCSPFRGDFDGDCLHGYVPQSLEARVEVRELVSLDRQLING
Query: QSGRNLLSLSHDSLTAAHLILEDGVSLNLFQMQQLQM-LTLHQLLPPAIVKSPLLRNCAWTGKQLFSILLPPDFEYSSPS------HN---VFIEKGELI
+ + DSL ++ + + L+ + +Q + + L L QL PAI+K L WTGKQ+FS++LP ++P HN V I +G+L+
Subjt: QSGRNLLSLSHDSLTAAHLILEDGVSLNLFQMQQLQM-LTLHQLLPPAIVKSPLLRNCAWTGKQLFSILLPPDFEYSSPS------HN---VFIEKGELI
Query: SSEGSYWLRDS--GRNLFQALIEHCEGKTLDYLRDAQGLVPLCGFILSQNMMDDIFCGLQEAEETCNLKQLMVDSHKEI-LTGNDEDNQHLLSIAVEHLI
+ + + G + EH + ++ Q + F+L+ + + +++ + ++V + + + G +N+ L A L+
Subjt: SSEGSYWLRDS--GRNLFQALIEHCEGKTLDYLRDAQGLVPLCGFILSQNMMDDIFCGLQEAEETCNLKQLMVDSHKEI-LTGNDEDNQHLLSIAVEHLI
Query: --YEKQKSAALNQASVDAFKKVFRDIQNLVHKYSGKDNSLLTMFKAGSKGNLMKLVQHSMCLGLQHSLVTLSFSLPHKLSCSAWNSQKMPRYIQED-GLP
+E ++ALN+ +A KK +++ + NS M +AGSKG + + Q ++ +G Q+ +P + + +P ++ +D G
Subjt: --YEKQKSAALNQASVDAFKKVFRDIQNLVHKYSGKDNSLLTMFKAGSKGNLMKLVQHSMCLGLQHSLVTLSFSLPHKLSCSAWNSQKMPRYIQED-GLP
Query: DRTQSFIPYAVVENSFLSGLNPFECFAHSVTNRDSSFSDNAEV--PGTLTRKLTFLMRDIYTAYDGTVRNAYGNQLVQFCYDID
R + ++ GL P E F H++ R+ + G L RKL + D++ AYDGTVRNA ++L+QF Y D
Subjt: DRTQSFIPYAVVENSFLSGLNPFECFAHSVTNRDSSFSDNAEV--PGTLTRKLTFLMRDIYTAYDGTVRNAYGNQLVQFCYDID
|
|
| P17546 DNA-directed RNA polymerase II subunit RPB1-A | 5.4e-48 | 26.71 | Show/hide |
Query: SRVLDCLKISKDTATSSSGLRWIKDVVLGKRSDHCFRMVVVGDPNIELSEIGIPCHVAERLQISEHLSSWNMKKLKIYVRR-----------------EG
++V D K+ T ++ ++GKR D R V+ GDPNI++ E+G+P VA L E +++ N K+L + RR +
Subjt: SRVLDCLKISKDTATSSSGLRWIKDVVLGKRSDHCFRMVVVGDPNIELSEIGIPCHVAERLQISEHLSSWNMKKLKIYVRR-----------------EG
Query: RLVRVRNVLELNMGDTIYRPLADGDVVLVNRPPSIHQHSLIALSVKLLPVSAVLSLNPLCCSPFRGDFDGDCLHGYVPQSLEARVEVRELVSLDRQLING
L+R R+ + LN+GD + R + +GDVVL NR P++H+ S++ V++L S LN C +P+ DFDGD ++ +VPQSL + E+ E++ + + ++
Subjt: RLVRVRNVLELNMGDTIYRPLADGDVVLVNRPPSIHQHSLIALSVKLLPVSAVLSLNPLCCSPFRGDFDGDCLHGYVPQSLEARVEVRELVSLDRQLING
Query: QSGRNLLSLSHDSLTAAHLILEDGVSLNLFQMQQLQM-LTLHQLLPPAIVKSPLLRNCAWTGKQLFSILLPPDFEYSSPS------HN---VFIEKGELI
+ + DSL ++ + + L+ + +Q + + L L QL PAI+K L WTGKQ+FS++LP ++P HN V I +G+L+
Subjt: QSGRNLLSLSHDSLTAAHLILEDGVSLNLFQMQQLQM-LTLHQLLPPAIVKSPLLRNCAWTGKQLFSILLPPDFEYSSPS------HN---VFIEKGELI
Query: SSEGSYWLRDS--GRNLFQALIEHCEGKTLDYLRDAQGLVPLCGFILSQNMMDDIFCGLQEAEETCNLKQLMVDSHKEI-LTGNDEDNQHLLSIAVEHLI
+ + + G + EH + ++ Q + F+L+ + + +++ + ++V + + + G +N+ L A L+
Subjt: SSEGSYWLRDS--GRNLFQALIEHCEGKTLDYLRDAQGLVPLCGFILSQNMMDDIFCGLQEAEETCNLKQLMVDSHKEI-LTGNDEDNQHLLSIAVEHLI
Query: --YEKQKSAALNQASVDAFKKVFRDIQNLVHKYSGKDNSLLTMFKAGSKGNLMKLVQHSMCLGLQHSLVTLSFSLPHKLSCSAWNSQKMPRYIQED-GLP
+E ++ALN+ +A KK +++ + NS M +AGSKG + + Q ++ +G Q+ +P + + +P ++ +D G
Subjt: --YEKQKSAALNQASVDAFKKVFRDIQNLVHKYSGKDNSLLTMFKAGSKGNLMKLVQHSMCLGLQHSLVTLSFSLPHKLSCSAWNSQKMPRYIQED-GLP
Query: DRTQSFIPYAVVENSFLSGLNPFECFAHSVTNRDSSFSDNAEV--PGTLTRKLTFLMRDIYTAYDGTVRNAYGNQLVQFCYDID
R + ++ GL P E F H++ R+ + G L RKL + D++ AYDGTVRNA ++L+QF Y D
Subjt: DRTQSFIPYAVVENSFLSGLNPFECFAHSVTNRDSSFSDNAEV--PGTLTRKLTFLMRDIYTAYDGTVRNAYGNQLVQFCYDID
|
|
| P35084 DNA-directed RNA polymerase II subunit rpb1 | 4.2e-45 | 27.45 | Show/hide |
Query: IKDVVLGKRSDHCFRMVVVGDPNIELSEIGIPCHVAERLQISEHLSSWNMKKL--------------KIYVRREG-----RLVRVRNVLELNMGDTIYRP
I+ ++GKR D R V+ DPN+ + ++G+P +A L E ++ +N+ K+ K +R +G R V+ + L G + R
Subjt: IKDVVLGKRSDHCFRMVVVGDPNIELSEIGIPCHVAERLQISEHLSSWNMKKL--------------KIYVRREG-----RLVRVRNVLELNMGDTIYRP
Query: LADGDVVLVNRPPSIHQHSLIALSVKLLPVSAVLSLNPLCCSPFRGDFDGDCLHGYVPQSLEARVEVRELVSLDRQLINGQSGRNLLSLSHDSLTAAHLI
+ DGDVV+ NR PS+H+ S++ +K++P S LN SP+ DFDGD ++ +VPQ+LE R EV E++ + RQ+++ QS R ++ + D+L + L
Subjt: LADGDVVLVNRPPSIHQHSLIALSVKLLPVSAVLSLNPLCCSPFRGDFDGDCLHGYVPQSLEARVEVRELVSLDRQLINGQSGRNLLSLSHDSLTAAHLI
Query: LEDGVSLNLFQMQQLQMLTL-------HQLLPPAIVKSPLLRNCAWTGKQLFSILLP--------------PDFEYSSPSHNVFIEKGELISSEGSYWLR
+ F + L M L ++ PPAI+K L WTGKQLFS+++P E S+ V IE+GEL++ G R
Subjt: LEDGVSLNLFQMQQLQMLTL-------HQLLPPAIVKSPLLRNCAWTGKQLFSILLP--------------PDFEYSSPSHNVFIEKGELISSEGSYWLR
Query: DSGRNLFQALIEHCEGKTLDYLRDAQGLVPLCGFILSQNMMDDIFCGLQEAEETCNLKQLMVDS---HKEILTGNDEDNQHLLSIAVEHLIYE---KQKS
G G + + + G C + Q + L T + + DS K LT + NQ V+ LI + KQ
Subjt: DSGRNLFQALIEHCEGKTLDYLRDAQGLVPLCGFILSQNMMDDIFCGLQEAEETCNLKQLMVDS---HKEILTGNDEDNQHLLSIAVEHLIYE---KQKS
Query: AALNQASVDAFKKVFRDIQNLVHKYSG--------KDNSLLTMFKAGSKGNLMKLVQHSMCLGLQHSLVTLSFSLPHKLSCSAWNSQKMPRYIQEDGLPD
++ ++ F++ + N +G +DN+L M AGSKG+ + + Q C+G Q ++ K + S+ +P + ++D P+
Subjt: AALNQASVDAFKKVFRDIQNLVHKYSG--------KDNSLLTMFKAGSKGNLMKLVQHSMCLGLQHSLVTLSFSLPHKLSCSAWNSQKMPRYIQEDGLPD
Query: RTQSFIPYAVVENSFLSGLNPFECFAHSVTNRDSSFSDNAEV--PGTLTRKLTFLMRDIYTAYDGTVRNAYGNQLVQFCYDIDRPTSVSSESDSENNRDR
VENS+L GL P E F H++ R+ + G + R+L M D+ YD TVRN+ G+ ++QF Y D E+ S ++ +
Subjt: RTQSFIPYAVVENSFLSGLNPFECFAHSVTNRDSSFSDNAEV--PGTLTRKLTFLMRDIYTAYDGTVRNAYGNQLVQFCYDIDRPTSVSSESDSENNRDR
Query: D
D
Subjt: D
|
|
| Q5D869 DNA-directed RNA polymerase V subunit 1 | 2.0e-79 | 27.27 | Show/hide |
Query: ERTRAYKKVVDFRGTANELGSRVLDCLKISKDTATSSSGLRW---IKDVVLGKRSDHCFRMVVVGDPNIELSEIGIPCHVAERLQISEHLSSWN---MKK
E R + RGTA +R +D + SSS W ++ + + K S R V+ GD ++E+GIP +A+R+ E +S N ++K
Subjt: ERTRAYKKVVDFRGTANELGSRVLDCLKISKDTATSSSGLRW---IKDVVLGKRSDHCFRMVVVGDPNIELSEIGIPCHVAERLQISEHLSSWN---MKK
Query: L-------------KIYVRREGRLVRVRNVLELNMGDTIYRPLADGDVVLVNRPPSIHQHSLIALSVKLLPVSAVLSLNPLCCSPFRGDFDGDCLHGYVP
L Y R+G + EL G ++R + DGDVV +NRPP+ H+HSL AL V + + V +NPL CSP DFDGDC+H + P
Subjt: L-------------KIYVRREGRLVRVRNVLELNMGDTIYRPLADGDVVLVNRPPSIHQHSLIALSVKLLPVSAVLSLNPLCCSPFRGDFDGDCLHGYVP
Query: QSLEARVEVRELVSLDRQLINGQSGRNLLSLSHDSLTAAHLILEDGVSLNLFQMQQLQMLTLHQLLPPAIVKSPLLRNCAWTGKQLFSILLPPDFEYSSP
QSL A+ EV EL S+++QL++ +G+ +L + DSL + ++LE V L+ QQL M L PPA+ KS AWT Q+ + P
Subjt: QSLEARVEVRELVSLDRQLINGQSGRNLLSLSHDSLTAAHLILEDGVSLNLFQMQQLQMLTLHQLLPPAIVKSPLLRNCAWTGKQLFSILLPPDFEYSSP
Query: SHNVFIEKGELISSEGSYWLR-DSGRNLFQALIEHCEGKTLDYLRDAQGLVPLCGFI--LSQNMMDDIFC-GLQEAEETCNLKQLMVDSHKEILTGNDED
KG+ +GS L+ D G + ++I E T +L +G GF L +M+ +F G + E ++ + +D
Subjt: SHNVFIEKGELISSEGSYWLR-DSGRNLFQALIEHCEGKTLDYLRDAQGLVPLCGFI--LSQNMMDDIFC-GLQEAEETCNLKQLMVDSHKEILTGNDED
Query: NQHLLSIAVEHLIYEKQKSAALNQASVDAFKKVFRD---IQNLVHK-------YSGKDNSLLTMFKAGSKGNLMKLVQHSMCLGLQHSLVTLSFSLPHKL
V H + ++ S +++ + +RD ++N +HK + K S+ + S + KLVQ + LGLQ S ++
Subjt: NQHLLSIAVEHLIYEKQKSAALNQASVDAFKKVFRD---IQNLVHK-------YSGKDNSLLTMFKAGSKGNLMKLVQHSMCLGLQHSLVTLSFSLPHKL
Query: SCSAWNSQKMPRYIQEDGLPDRTQSFIPYAVVENSFLSGLNPFECFAHSVTNRD--SSFSDNAEVPGTLTRKLTFLMRDIYTAYDGTVRNAYGNQLVQFC
+ + +K R I G + +V+ F GL+P+E AHS+ R+ S PGTL + L ++RDI DGTVRN N ++QF
Subjt: SCSAWNSQKMPRYIQEDGLPDRTQSFIPYAVVENSFLSGLNPFECFAHSVTNRD--SSFSDNAEVPGTLTRKLTFLMRDIYTAYDGTVRNAYGNQLVQFC
Query: YDIDRPTSVSSESDSENNRDRDIGGHPVGSLAACAFSEAAYSALDQPISLLEASPLLN-----LKRVLEC--GSKRNSTKQTFSLFLSEKLSKRSYGFEY
Y +D ++ G PVG LAA A S AY A +L++SP N +K VL C + + + L+L+E + + E
Subjt: YDIDRPTSVSSESDSENNRDRDIGGHPVGSLAACAFSEAAYSALDQPISLLEASPLLN-----LKRVLEC--GSKRNSTKQTFSLFLSEKLSKRSYGFEY
Query: GALGVKNHLERVMFKDIVSSVMIIFSPQPSRKKHFSPWVC---HFHVCKDILKKRRLKM-------NSVIHSLNMR------------------CDSVRQ
A V+N L +V KD ++ + QP+ + F C H H+ K +L+ + M VI+SL + C S R
Subjt: GALGVKNHLERVMFKDIVSSVMIIFSPQPSRKKHFSPWVC---HFHVCKDILKKRRLKM-------NSVIHSLNMR------------------CDSVRQ
Query: EGRMNLPSLQIITQDCPLAD-SLTEDGDTVCLTIDRV---------------DITWNDRPKVPKPRCSH----GELYLRVTMSGEG---NSRFWATLINN
+ +T D L D +C T+ V +I WN R H GE L VT+ + W +I++
Subjt: EGRMNLPSLQIITQDCPLAD-SLTEDGDTVCLTIDRV---------------DITWNDRPKVPKPRCSH----GELYLRVTMSGEG---NSRFWATLINN
Query: CLPIMDLIDWTRSHPDNTHSLCLAYGIDSGWKYFLNSLECATLDIGKTIRLEHLLLVANSLSATGEFVGLNVKGLTHQREHALVKTPFMQACFSSPGACL
CL ++ LID RS P + + G+ ++ + L + + K + EH++L+AN+++ +G +G N G +K PF +A +P C
Subjt: CLPIMDLIDWTRSHPDNTHSLCLAYGIDSGWKYFLNSLECATLDIGKTIRLEHLLLVANSLSATGEFVGLNVKGLTHQREHALVKTPFMQACFSSPGACL
Query: IKAAKAGIKDNLSGSLDALAWGRMPSLGTGGQFDILYSGK--GHELNKPVDVYNLL
KAA+ D+LS + + +WG+ +GTG QF++L++ K G + + DVY+ L
Subjt: IKAAKAGIKDNLSGSLDALAWGRMPSLGTGGQFDILYSGK--GHELNKPVDVYNLL
|
|
| Q5D869 DNA-directed RNA polymerase V subunit 1 | 4.9e-09 | 31.78 | Show/hide |
Query: LNDIQKLSFALRTILH--KYSLNERLNEVDKS-TLMMALYFHPHRDEKIGVGAQDIKVGSHSKYQNTRCFVLIRSDGTTEDFSYHKCVLGALEIIAPHRV
L+D++ + LR I+H Y + +++ DK+ L L FHP ++ K+G G I V H+ + ++RCF ++ +DG +DFSY K + L P R
Subjt: LNDIQKLSFALRTILH--KYSLNERLNEVDKS-TLMMALYFHPHRDEKIGVGAQDIKVGSHSKYQNTRCFVLIRSDGTTEDFSYHKCVLGALEIIAPHRV
Query: KGYQSKW
+ + K+
Subjt: KGYQSKW
|
|
| Q9LQ02 DNA-directed RNA polymerase IV subunit 1 | 0.0e+00 | 49.47 | Show/hide |
Query: MRFKLSTTDMFKKSMIMVEVKENMSKKYQKRVAKGGLPSDYWDFIPKDEQQEESYCRPNRKILTHAQ-----------FLKKFVPAIDSLFLNSFPVTPN
M+F+++T ++F++S I+VEV E K +KR LP DYW F+P+D +ES +P R+I+THAQ +KK +P +SL L SFPVTPN
Subjt: MRFKLSTTDMFKKSMIMVEVKENMSKKYQKRVAKGGLPSDYWDFIPKDEQQEESYCRPNRKILTHAQ-----------FLKKFVPAIDSLFLNSFPVTPN
Query: SHRVTEMAHSFSNGQRLIFDERTRAYKKVVDFRGTANELGSRVLDCLKISK---DTATSSS----------------GLRWIKDVVLGKRSDHCFRMVVV
+RVTE+ H F NG RLIFDERTR YKK+V F G EL SRV++C++ S+ +T +SS GLR++KDV+LGKRSDH FR VVV
Subjt: SHRVTEMAHSFSNGQRLIFDERTRAYKKVVDFRGTANELGSRVLDCLKISK---DTATSSS----------------GLRWIKDVVLGKRSDHCFRMVVV
Query: GDPNIELSEIGIPCHVAERLQISEHLSSWNMKKL------------KIYVRREGRLVRVRNVLELNMGDTIYRPLADGDVVLVNRPPSIHQHSLIALSVK
GDP+++L+EIGIP +A+RLQ+SEHL+ N ++L +++VRR RLV ++ V +L GD I+R L DGD VL+NRPPSIHQHSLIA++V+
Subjt: GDPNIELSEIGIPCHVAERLQISEHLSSWNMKKL------------KIYVRREGRLVRVRNVLELNMGDTIYRPLADGDVVLVNRPPSIHQHSLIALSVK
Query: LLPVSAVLSLNPLCCSPFRGDFDGDCLHGYVPQSLEARVEVRELVSLDRQLINGQSGRNLLSLSHDSLTAAHLI-LEDGVSLNLFQMQQLQMLTLHQLLP
+LP ++V+SLNP+CC PFRGDFDGDCLHGYVPQS++A+VE+ ELV+LD+QLIN Q+GRNLLSL DSLTAA+L+ +E LN QMQQLQM QL P
Subjt: LLPVSAVLSLNPLCCSPFRGDFDGDCLHGYVPQSLEARVEVRELVSLDRQLINGQSGRNLLSLSHDSLTAAHLI-LEDGVSLNLFQMQQLQMLTLHQLLP
Query: PAIVK-SPLLRNCAWTGKQLFSILLPPDFEYSSPSHNVFIEKGELIS-SEGSYWLRDSGRNLFQALIEHCEGKTLDYLRDAQGL-----------VPLCG
PAI+K SP WTG QLF +L PP F+Y+ P +NV + GEL+S SEGS WLRD N + L++H +GK LD + AQ + V L
Subjt: PAIVK-SPLLRNCAWTGKQLFSILLPPDFEYSSPSHNVFIEKGELIS-SEGSYWLRDSGRNLFQALIEHCEGKTLDYLRDAQGL-----------VPLCG
Query: FILS------QNMMDDIFCGLQEAEETCNLKQLMVDSHKEILTGNDEDNQHLLSIAVEHLIYEKQKSAALNQASVDAFKKVFRDIQNLVHKYSGKDNSLL
LS +N+ ++I GL+EAE+ CN +QLMV+S ++ L N ED + + YE+QKSA L++ +V AFK +RD+Q L ++Y + NS L
Subjt: FILS------QNMMDDIFCGLQEAEETCNLKQLMVDSHKEILTGNDEDNQHLLSIAVEHLIYEKQKSAALNQASVDAFKKVFRDIQNLVHKYSGKDNSLL
Query: TMFKAGSKGNLMKLVQHSMCLGLQHSLVTLSFSLPHKLSCSAWNSQKMPRYIQEDGLPDRTQSFIPYAVVENSFLSGLNPFECFAHSVTNRDSSFSDNAE
M KAGSKGN+ KLVQHSMC+GLQ+S V+LSF P +L+C+AWN P + T+S++PY V+ENSFL+GLNP E F HSVT+RDSSFS NA+
Subjt: TMFKAGSKGNLMKLVQHSMCLGLQHSLVTLSFSLPHKLSCSAWNSQKMPRYIQEDGLPDRTQSFIPYAVVENSFLSGLNPFECFAHSVTNRDSSFSDNAE
Query: VPGTLTRKLTFLMRDIYTAYDGTVRNAYGNQLVQFCYDIDRPTSVSSESDSENNRDRDIGGHPVGSLAACAFSEAAYSALDQPISLLEASPLLNLKRVLE
+PGTL+R+L F MRDIY AYDGTVRN++GNQLVQF Y+ D P DI G +GSL+ACA SEAAYSALDQPISLLE SPLLNLK VLE
Subjt: VPGTLTRKLTFLMRDIYTAYDGTVRNAYGNQLVQFCYDIDRPTSVSSESDSENNRDRDIGGHPVGSLAACAFSEAAYSALDQPISLLEASPLLNLKRVLE
Query: CGSKRNSTKQTFSLFLSEKLSKRSYGFEYGALGVKNHLERVMFKDIVSSVMIIFSPQPSRKKHFSPWVCHFHVCKDILKKRRLKMNSVIHSLNMRCDSVR
CGSK+ +QT SL+LSE LSK+ +GFEYG+L +KNHLE++ F +IVS+ MIIFSP + K SPWVCHFH+ + +LK+++L SV+ SLN + S
Subjt: CGSKRNSTKQTFSLFLSEKLSKRSYGFEYGALGVKNHLERVMFKDIVSSVMIIFSPQPSRKKHFSPWVCHFHVCKDILKKRRLKMNSVIHSLNMRCDSVR
Query: QEGRMNLPSLQI-ITQDCPLADSLTEDGDTVCLT-----------------------------------IDRVDITWNDRPKVPKPRCSH--GELYLRVT
+E ++++ L I T C D +D D VC+T I +V+I W DRPK PK +H GELYL+VT
Subjt: QEGRMNLPSLQI-ITQDCPLADSLTEDGDTVCLT-----------------------------------IDRVDITWNDRPKVPKPRCSH--GELYLRVT
Query: MSGE-GNSRFWATLINNCLPIMDLIDWTRSHPDNTHSLCLAYGIDSGWKYFLNSLECATLDIGKTIRLEHLLLVANSLSATGEFVGLNVKGLTHQREHAL
M G+ G W L+ CLPIMD+IDW RSHPDN C YGID+G F+ +LE A D GK I EHLLLVA+SLS TGEFV LN KG + QR+
Subjt: MSGE-GNSRFWATLINNCLPIMDLIDWTRSHPDNTHSLCLAYGIDSGWKYFLNSLECATLDIGKTIRLEHLLLVANSLSATGEFVGLNVKGLTHQREHAL
Query: VKTPFMQACFSSPGACLIKAAKAGIKDNLSGSLDALAWGRMPSLGTGGQFDILYSGKGHELNKPVDVYNLLGGQSTCEKQNAKIESVDKNNIS------E
PF QACFSSP C +KAAK G++D+L GS+DALAWG++P GTG QF+I+ S K H PVDVY+LL T + N+ +S DK +
Subjt: VKTPFMQACFSSPGACLIKAAKAGIKDNLSGSLDALAWGRMPSLGTGGQFDILYSGKGHELNKPVDVYNLLGGQSTCEKQNAKIESVDKNNIS------E
Query: KYSAQLVLKNGGSTIKGLKRKFLTLNDIQKLSFALRTILHKYSLNERLNEVDKSTLMMALYFHPHRDEKIGVGAQDIKVGSHSKYQNTRCFVLIRSDGTT
+ + + +G L R T +I+ LS +L+ ILH Y +NE LNE D+ + M L HP+ EKIG G + I+V + SK+ ++ CF ++R DGT
Subjt: KYSAQLVLKNGGSTIKGLKRKFLTLNDIQKLSFALRTILHKYSLNERLNEVDKSTLMMALYFHPHRDEKIGVGAQDIKVGSHSKYQNTRCFVLIRSDGTT
Query: EDFSYHKCVLGALEIIAPHRVKGYQSKWMQ
EDFSYHKCVLGA +IIAP ++ Y+SK+++
Subjt: EDFSYHKCVLGALEIIAPHRVKGYQSKWMQ
|
|
| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT1G63020.1 nuclear RNA polymerase D1A | 0.0e+00 | 49.47 | Show/hide |
Query: MRFKLSTTDMFKKSMIMVEVKENMSKKYQKRVAKGGLPSDYWDFIPKDEQQEESYCRPNRKILTHAQ-----------FLKKFVPAIDSLFLNSFPVTPN
M+F+++T ++F++S I+VEV E K +KR LP DYW F+P+D +ES +P R+I+THAQ +KK +P +SL L SFPVTPN
Subjt: MRFKLSTTDMFKKSMIMVEVKENMSKKYQKRVAKGGLPSDYWDFIPKDEQQEESYCRPNRKILTHAQ-----------FLKKFVPAIDSLFLNSFPVTPN
Query: SHRVTEMAHSFSNGQRLIFDERTRAYKKVVDFRGTANELGSRVLDCLKISK---DTATSSS----------------GLRWIKDVVLGKRSDHCFRMVVV
+RVTE+ H F NG RLIFDERTR YKK+V F G EL SRV++C++ S+ +T +SS GLR++KDV+LGKRSDH FR VVV
Subjt: SHRVTEMAHSFSNGQRLIFDERTRAYKKVVDFRGTANELGSRVLDCLKISK---DTATSSS----------------GLRWIKDVVLGKRSDHCFRMVVV
Query: GDPNIELSEIGIPCHVAERLQISEHLSSWNMKKL------------KIYVRREGRLVRVRNVLELNMGDTIYRPLADGDVVLVNRPPSIHQHSLIALSVK
GDP+++L+EIGIP +A+RLQ+SEHL+ N ++L +++VRR RLV ++ V +L GD I+R L DGD VL+NRPPSIHQHSLIA++V+
Subjt: GDPNIELSEIGIPCHVAERLQISEHLSSWNMKKL------------KIYVRREGRLVRVRNVLELNMGDTIYRPLADGDVVLVNRPPSIHQHSLIALSVK
Query: LLPVSAVLSLNPLCCSPFRGDFDGDCLHGYVPQSLEARVEVRELVSLDRQLINGQSGRNLLSLSHDSLTAAHLI-LEDGVSLNLFQMQQLQMLTLHQLLP
+LP ++V+SLNP+CC PFRGDFDGDCLHGYVPQS++A+VE+ ELV+LD+QLIN Q+GRNLLSL DSLTAA+L+ +E LN QMQQLQM QL P
Subjt: LLPVSAVLSLNPLCCSPFRGDFDGDCLHGYVPQSLEARVEVRELVSLDRQLINGQSGRNLLSLSHDSLTAAHLI-LEDGVSLNLFQMQQLQMLTLHQLLP
Query: PAIVK-SPLLRNCAWTGKQLFSILLPPDFEYSSPSHNVFIEKGELIS-SEGSYWLRDSGRNLFQALIEHCEGKTLDYLRDAQGL-----------VPLCG
PAI+K SP WTG QLF +L PP F+Y+ P +NV + GEL+S SEGS WLRD N + L++H +GK LD + AQ + V L
Subjt: PAIVK-SPLLRNCAWTGKQLFSILLPPDFEYSSPSHNVFIEKGELIS-SEGSYWLRDSGRNLFQALIEHCEGKTLDYLRDAQGL-----------VPLCG
Query: FILS------QNMMDDIFCGLQEAEETCNLKQLMVDSHKEILTGNDEDNQHLLSIAVEHLIYEKQKSAALNQASVDAFKKVFRDIQNLVHKYSGKDNSLL
LS +N+ ++I GL+EAE+ CN +QLMV+S ++ L N ED + + YE+QKSA L++ +V AFK +RD+Q L ++Y + NS L
Subjt: FILS------QNMMDDIFCGLQEAEETCNLKQLMVDSHKEILTGNDEDNQHLLSIAVEHLIYEKQKSAALNQASVDAFKKVFRDIQNLVHKYSGKDNSLL
Query: TMFKAGSKGNLMKLVQHSMCLGLQHSLVTLSFSLPHKLSCSAWNSQKMPRYIQEDGLPDRTQSFIPYAVVENSFLSGLNPFECFAHSVTNRDSSFSDNAE
M KAGSKGN+ KLVQHSMC+GLQ+S V+LSF P +L+C+AWN P + T+S++PY V+ENSFL+GLNP E F HSVT+RDSSFS NA+
Subjt: TMFKAGSKGNLMKLVQHSMCLGLQHSLVTLSFSLPHKLSCSAWNSQKMPRYIQEDGLPDRTQSFIPYAVVENSFLSGLNPFECFAHSVTNRDSSFSDNAE
Query: VPGTLTRKLTFLMRDIYTAYDGTVRNAYGNQLVQFCYDIDRPTSVSSESDSENNRDRDIGGHPVGSLAACAFSEAAYSALDQPISLLEASPLLNLKRVLE
+PGTL+R+L F MRDIY AYDGTVRN++GNQLVQF Y+ D P DI G +GSL+ACA SEAAYSALDQPISLLE SPLLNLK VLE
Subjt: VPGTLTRKLTFLMRDIYTAYDGTVRNAYGNQLVQFCYDIDRPTSVSSESDSENNRDRDIGGHPVGSLAACAFSEAAYSALDQPISLLEASPLLNLKRVLE
Query: CGSKRNSTKQTFSLFLSEKLSKRSYGFEYGALGVKNHLERVMFKDIVSSVMIIFSPQPSRKKHFSPWVCHFHVCKDILKKRRLKMNSVIHSLNMRCDSVR
CGSK+ +QT SL+LSE LSK+ +GFEYG+L +KNHLE++ F +IVS+ MIIFSP + K SPWVCHFH+ + +LK+++L SV+ SLN + S
Subjt: CGSKRNSTKQTFSLFLSEKLSKRSYGFEYGALGVKNHLERVMFKDIVSSVMIIFSPQPSRKKHFSPWVCHFHVCKDILKKRRLKMNSVIHSLNMRCDSVR
Query: QEGRMNLPSLQI-ITQDCPLADSLTEDGDTVCLT-----------------------------------IDRVDITWNDRPKVPKPRCSH--GELYLRVT
+E ++++ L I T C D +D D VC+T I +V+I W DRPK PK +H GELYL+VT
Subjt: QEGRMNLPSLQI-ITQDCPLADSLTEDGDTVCLT-----------------------------------IDRVDITWNDRPKVPKPRCSH--GELYLRVT
Query: MSGE-GNSRFWATLINNCLPIMDLIDWTRSHPDNTHSLCLAYGIDSGWKYFLNSLECATLDIGKTIRLEHLLLVANSLSATGEFVGLNVKGLTHQREHAL
M G+ G W L+ CLPIMD+IDW RSHPDN C YGID+G F+ +LE A D GK I EHLLLVA+SLS TGEFV LN KG + QR+
Subjt: MSGE-GNSRFWATLINNCLPIMDLIDWTRSHPDNTHSLCLAYGIDSGWKYFLNSLECATLDIGKTIRLEHLLLVANSLSATGEFVGLNVKGLTHQREHAL
Query: VKTPFMQACFSSPGACLIKAAKAGIKDNLSGSLDALAWGRMPSLGTGGQFDILYSGKGHELNKPVDVYNLLGGQSTCEKQNAKIESVDKNNIS------E
PF QACFSSP C +KAAK G++D+L GS+DALAWG++P GTG QF+I+ S K H PVDVY+LL T + N+ +S DK +
Subjt: VKTPFMQACFSSPGACLIKAAKAGIKDNLSGSLDALAWGRMPSLGTGGQFDILYSGKGHELNKPVDVYNLLGGQSTCEKQNAKIESVDKNNIS------E
Query: KYSAQLVLKNGGSTIKGLKRKFLTLNDIQKLSFALRTILHKYSLNERLNEVDKSTLMMALYFHPHRDEKIGVGAQDIKVGSHSKYQNTRCFVLIRSDGTT
+ + + +G L R T +I+ LS +L+ ILH Y +NE LNE D+ + M L HP+ EKIG G + I+V + SK+ ++ CF ++R DGT
Subjt: KYSAQLVLKNGGSTIKGLKRKFLTLNDIQKLSFALRTILHKYSLNERLNEVDKSTLMMALYFHPHRDEKIGVGAQDIKVGSHSKYQNTRCFVLIRSDGTT
Query: EDFSYHKCVLGALEIIAPHRVKGYQSKWMQ
EDFSYHKCVLGA +IIAP ++ Y+SK+++
Subjt: EDFSYHKCVLGALEIIAPHRVKGYQSKWMQ
|
|
| AT1G63020.2 nuclear RNA polymerase D1A | 0.0e+00 | 49.47 | Show/hide |
Query: MRFKLSTTDMFKKSMIMVEVKENMSKKYQKRVAKGGLPSDYWDFIPKDEQQEESYCRPNRKILTHAQ-----------FLKKFVPAIDSLFLNSFPVTPN
M+F+++T ++F++S I+VEV E K +KR LP DYW F+P+D +ES +P R+I+THAQ +KK +P +SL L SFPVTPN
Subjt: MRFKLSTTDMFKKSMIMVEVKENMSKKYQKRVAKGGLPSDYWDFIPKDEQQEESYCRPNRKILTHAQ-----------FLKKFVPAIDSLFLNSFPVTPN
Query: SHRVTEMAHSFSNGQRLIFDERTRAYKKVVDFRGTANELGSRVLDCLKISK---DTATSSS----------------GLRWIKDVVLGKRSDHCFRMVVV
+RVTE+ H F NG RLIFDERTR YKK+V F G EL SRV++C++ S+ +T +SS GLR++KDV+LGKRSDH FR VVV
Subjt: SHRVTEMAHSFSNGQRLIFDERTRAYKKVVDFRGTANELGSRVLDCLKISK---DTATSSS----------------GLRWIKDVVLGKRSDHCFRMVVV
Query: GDPNIELSEIGIPCHVAERLQISEHLSSWNMKKL------------KIYVRREGRLVRVRNVLELNMGDTIYRPLADGDVVLVNRPPSIHQHSLIALSVK
GDP+++L+EIGIP +A+RLQ+SEHL+ N ++L +++VRR RLV ++ V +L GD I+R L DGD VL+NRPPSIHQHSLIA++V+
Subjt: GDPNIELSEIGIPCHVAERLQISEHLSSWNMKKL------------KIYVRREGRLVRVRNVLELNMGDTIYRPLADGDVVLVNRPPSIHQHSLIALSVK
Query: LLPVSAVLSLNPLCCSPFRGDFDGDCLHGYVPQSLEARVEVRELVSLDRQLINGQSGRNLLSLSHDSLTAAHLI-LEDGVSLNLFQMQQLQMLTLHQLLP
+LP ++V+SLNP+CC PFRGDFDGDCLHGYVPQS++A+VE+ ELV+LD+QLIN Q+GRNLLSL DSLTAA+L+ +E LN QMQQLQM QL P
Subjt: LLPVSAVLSLNPLCCSPFRGDFDGDCLHGYVPQSLEARVEVRELVSLDRQLINGQSGRNLLSLSHDSLTAAHLI-LEDGVSLNLFQMQQLQMLTLHQLLP
Query: PAIVK-SPLLRNCAWTGKQLFSILLPPDFEYSSPSHNVFIEKGELIS-SEGSYWLRDSGRNLFQALIEHCEGKTLDYLRDAQGL-----------VPLCG
PAI+K SP WTG QLF +L PP F+Y+ P +NV + GEL+S SEGS WLRD N + L++H +GK LD + AQ + V L
Subjt: PAIVK-SPLLRNCAWTGKQLFSILLPPDFEYSSPSHNVFIEKGELIS-SEGSYWLRDSGRNLFQALIEHCEGKTLDYLRDAQGL-----------VPLCG
Query: FILS------QNMMDDIFCGLQEAEETCNLKQLMVDSHKEILTGNDEDNQHLLSIAVEHLIYEKQKSAALNQASVDAFKKVFRDIQNLVHKYSGKDNSLL
LS +N+ ++I GL+EAE+ CN +QLMV+S ++ L N ED + + YE+QKSA L++ +V AFK +RD+Q L ++Y + NS L
Subjt: FILS------QNMMDDIFCGLQEAEETCNLKQLMVDSHKEILTGNDEDNQHLLSIAVEHLIYEKQKSAALNQASVDAFKKVFRDIQNLVHKYSGKDNSLL
Query: TMFKAGSKGNLMKLVQHSMCLGLQHSLVTLSFSLPHKLSCSAWNSQKMPRYIQEDGLPDRTQSFIPYAVVENSFLSGLNPFECFAHSVTNRDSSFSDNAE
M KAGSKGN+ KLVQHSMC+GLQ+S V+LSF P +L+C+AWN P + T+S++PY V+ENSFL+GLNP E F HSVT+RDSSFS NA+
Subjt: TMFKAGSKGNLMKLVQHSMCLGLQHSLVTLSFSLPHKLSCSAWNSQKMPRYIQEDGLPDRTQSFIPYAVVENSFLSGLNPFECFAHSVTNRDSSFSDNAE
Query: VPGTLTRKLTFLMRDIYTAYDGTVRNAYGNQLVQFCYDIDRPTSVSSESDSENNRDRDIGGHPVGSLAACAFSEAAYSALDQPISLLEASPLLNLKRVLE
+PGTL+R+L F MRDIY AYDGTVRN++GNQLVQF Y+ D P DI G +GSL+ACA SEAAYSALDQPISLLE SPLLNLK VLE
Subjt: VPGTLTRKLTFLMRDIYTAYDGTVRNAYGNQLVQFCYDIDRPTSVSSESDSENNRDRDIGGHPVGSLAACAFSEAAYSALDQPISLLEASPLLNLKRVLE
Query: CGSKRNSTKQTFSLFLSEKLSKRSYGFEYGALGVKNHLERVMFKDIVSSVMIIFSPQPSRKKHFSPWVCHFHVCKDILKKRRLKMNSVIHSLNMRCDSVR
CGSK+ +QT SL+LSE LSK+ +GFEYG+L +KNHLE++ F +IVS+ MIIFSP + K SPWVCHFH+ + +LK+++L SV+ SLN + S
Subjt: CGSKRNSTKQTFSLFLSEKLSKRSYGFEYGALGVKNHLERVMFKDIVSSVMIIFSPQPSRKKHFSPWVCHFHVCKDILKKRRLKMNSVIHSLNMRCDSVR
Query: QEGRMNLPSLQI-ITQDCPLADSLTEDGDTVCLT-----------------------------------IDRVDITWNDRPKVPKPRCSH--GELYLRVT
+E ++++ L I T C D +D D VC+T I +V+I W DRPK PK +H GELYL+VT
Subjt: QEGRMNLPSLQI-ITQDCPLADSLTEDGDTVCLT-----------------------------------IDRVDITWNDRPKVPKPRCSH--GELYLRVT
Query: MSGE-GNSRFWATLINNCLPIMDLIDWTRSHPDNTHSLCLAYGIDSGWKYFLNSLECATLDIGKTIRLEHLLLVANSLSATGEFVGLNVKGLTHQREHAL
M G+ G W L+ CLPIMD+IDW RSHPDN C YGID+G F+ +LE A D GK I EHLLLVA+SLS TGEFV LN KG + QR+
Subjt: MSGE-GNSRFWATLINNCLPIMDLIDWTRSHPDNTHSLCLAYGIDSGWKYFLNSLECATLDIGKTIRLEHLLLVANSLSATGEFVGLNVKGLTHQREHAL
Query: VKTPFMQACFSSPGACLIKAAKAGIKDNLSGSLDALAWGRMPSLGTGGQFDILYSGKGHELNKPVDVYNLLGGQSTCEKQNAKIESVDKNNIS------E
PF QACFSSP C +KAAK G++D+L GS+DALAWG++P GTG QF+I+ S K H PVDVY+LL T + N+ +S DK +
Subjt: VKTPFMQACFSSPGACLIKAAKAGIKDNLSGSLDALAWGRMPSLGTGGQFDILYSGKGHELNKPVDVYNLLGGQSTCEKQNAKIESVDKNNIS------E
Query: KYSAQLVLKNGGSTIKGLKRKFLTLNDIQKLSFALRTILHKYSLNERLNEVDKSTLMMALYFHPHRDEKIGVGAQDIKVGSHSKYQNTRCFVLIRSDGTT
+ + + +G L R T +I+ LS +L+ ILH Y +NE LNE D+ + M L HP+ EKIG G + I+V + SK+ ++ CF ++R DGT
Subjt: KYSAQLVLKNGGSTIKGLKRKFLTLNDIQKLSFALRTILHKYSLNERLNEVDKSTLMMALYFHPHRDEKIGVGAQDIKVGSHSKYQNTRCFVLIRSDGTT
Query: EDFSYHKCVLGALEIIAPHRVKGYQSKWMQ
EDFSYHKCVLGA +IIAP ++ Y+SK+++
Subjt: EDFSYHKCVLGALEIIAPHRVKGYQSKWMQ
|
|
| AT2G40030.1 nuclear RNA polymerase D1B | 1.4e-80 | 27.27 | Show/hide |
Query: ERTRAYKKVVDFRGTANELGSRVLDCLKISKDTATSSSGLRW---IKDVVLGKRSDHCFRMVVVGDPNIELSEIGIPCHVAERLQISEHLSSWN---MKK
E R + RGTA +R +D + SSS W ++ + + K S R V+ GD ++E+GIP +A+R+ E +S N ++K
Subjt: ERTRAYKKVVDFRGTANELGSRVLDCLKISKDTATSSSGLRW---IKDVVLGKRSDHCFRMVVVGDPNIELSEIGIPCHVAERLQISEHLSSWN---MKK
Query: L-------------KIYVRREGRLVRVRNVLELNMGDTIYRPLADGDVVLVNRPPSIHQHSLIALSVKLLPVSAVLSLNPLCCSPFRGDFDGDCLHGYVP
L Y R+G + EL G ++R + DGDVV +NRPP+ H+HSL AL V + + V +NPL CSP DFDGDC+H + P
Subjt: L-------------KIYVRREGRLVRVRNVLELNMGDTIYRPLADGDVVLVNRPPSIHQHSLIALSVKLLPVSAVLSLNPLCCSPFRGDFDGDCLHGYVP
Query: QSLEARVEVRELVSLDRQLINGQSGRNLLSLSHDSLTAAHLILEDGVSLNLFQMQQLQMLTLHQLLPPAIVKSPLLRNCAWTGKQLFSILLPPDFEYSSP
QSL A+ EV EL S+++QL++ +G+ +L + DSL + ++LE V L+ QQL M L PPA+ KS AWT Q+ + P
Subjt: QSLEARVEVRELVSLDRQLINGQSGRNLLSLSHDSLTAAHLILEDGVSLNLFQMQQLQMLTLHQLLPPAIVKSPLLRNCAWTGKQLFSILLPPDFEYSSP
Query: SHNVFIEKGELISSEGSYWLR-DSGRNLFQALIEHCEGKTLDYLRDAQGLVPLCGFI--LSQNMMDDIFC-GLQEAEETCNLKQLMVDSHKEILTGNDED
KG+ +GS L+ D G + ++I E T +L +G GF L +M+ +F G + E ++ + +D
Subjt: SHNVFIEKGELISSEGSYWLR-DSGRNLFQALIEHCEGKTLDYLRDAQGLVPLCGFI--LSQNMMDDIFC-GLQEAEETCNLKQLMVDSHKEILTGNDED
Query: NQHLLSIAVEHLIYEKQKSAALNQASVDAFKKVFRD---IQNLVHK-------YSGKDNSLLTMFKAGSKGNLMKLVQHSMCLGLQHSLVTLSFSLPHKL
V H + ++ S +++ + +RD ++N +HK + K S+ + S + KLVQ + LGLQ S ++
Subjt: NQHLLSIAVEHLIYEKQKSAALNQASVDAFKKVFRD---IQNLVHK-------YSGKDNSLLTMFKAGSKGNLMKLVQHSMCLGLQHSLVTLSFSLPHKL
Query: SCSAWNSQKMPRYIQEDGLPDRTQSFIPYAVVENSFLSGLNPFECFAHSVTNRD--SSFSDNAEVPGTLTRKLTFLMRDIYTAYDGTVRNAYGNQLVQFC
+ + +K R I G + +V+ F GL+P+E AHS+ R+ S PGTL + L ++RDI DGTVRN N ++QF
Subjt: SCSAWNSQKMPRYIQEDGLPDRTQSFIPYAVVENSFLSGLNPFECFAHSVTNRD--SSFSDNAEVPGTLTRKLTFLMRDIYTAYDGTVRNAYGNQLVQFC
Query: YDIDRPTSVSSESDSENNRDRDIGGHPVGSLAACAFSEAAYSALDQPISLLEASPLLN-----LKRVLEC--GSKRNSTKQTFSLFLSEKLSKRSYGFEY
Y +D ++ G PVG LAA A S AY A +L++SP N +K VL C + + + L+L+E + + E
Subjt: YDIDRPTSVSSESDSENNRDRDIGGHPVGSLAACAFSEAAYSALDQPISLLEASPLLN-----LKRVLEC--GSKRNSTKQTFSLFLSEKLSKRSYGFEY
Query: GALGVKNHLERVMFKDIVSSVMIIFSPQPSRKKHFSPWVC---HFHVCKDILKKRRLKM-------NSVIHSLNMR------------------CDSVRQ
A V+N L +V KD ++ + QP+ + F C H H+ K +L+ + M VI+SL + C S R
Subjt: GALGVKNHLERVMFKDIVSSVMIIFSPQPSRKKHFSPWVC---HFHVCKDILKKRRLKM-------NSVIHSLNMR------------------CDSVRQ
Query: EGRMNLPSLQIITQDCPLAD-SLTEDGDTVCLTIDRV---------------DITWNDRPKVPKPRCSH----GELYLRVTMSGEG---NSRFWATLINN
+ +T D L D +C T+ V +I WN R H GE L VT+ + W +I++
Subjt: EGRMNLPSLQIITQDCPLAD-SLTEDGDTVCLTIDRV---------------DITWNDRPKVPKPRCSH----GELYLRVTMSGEG---NSRFWATLINN
Query: CLPIMDLIDWTRSHPDNTHSLCLAYGIDSGWKYFLNSLECATLDIGKTIRLEHLLLVANSLSATGEFVGLNVKGLTHQREHALVKTPFMQACFSSPGACL
CL ++ LID RS P + + G+ ++ + L + + K + EH++L+AN+++ +G +G N G +K PF +A +P C
Subjt: CLPIMDLIDWTRSHPDNTHSLCLAYGIDSGWKYFLNSLECATLDIGKTIRLEHLLLVANSLSATGEFVGLNVKGLTHQREHALVKTPFMQACFSSPGACL
Query: IKAAKAGIKDNLSGSLDALAWGRMPSLGTGGQFDILYSGK--GHELNKPVDVYNLL
KAA+ D+LS + + +WG+ +GTG QF++L++ K G + + DVY+ L
Subjt: IKAAKAGIKDNLSGSLDALAWGRMPSLGTGGQFDILYSGK--GHELNKPVDVYNLL
|
|
| AT2G40030.1 nuclear RNA polymerase D1B | 3.5e-10 | 31.78 | Show/hide |
Query: LNDIQKLSFALRTILH--KYSLNERLNEVDKS-TLMMALYFHPHRDEKIGVGAQDIKVGSHSKYQNTRCFVLIRSDGTTEDFSYHKCVLGALEIIAPHRV
L+D++ + LR I+H Y + +++ DK+ L L FHP ++ K+G G I V H+ + ++RCF ++ +DG +DFSY K + L P R
Subjt: LNDIQKLSFALRTILH--KYSLNERLNEVDKS-TLMMALYFHPHRDEKIGVGAQDIKVGSHSKYQNTRCFVLIRSDGTTEDFSYHKCVLGALEIIAPHRV
Query: KGYQSKW
+ + K+
Subjt: KGYQSKW
|
|
| AT4G35800.1 RNA polymerase II large subunit | 2.6e-42 | 26.52 | Show/hide |
Query: IKDVVLGKRSDHCFRMVVVGDPNIELSEIGIPCHVAERLQISEHLSSWNMKKL-----------------KIYVRREGRLVRVRNVLE-----LNMGDTI
I+ ++GKR D R V+ DP I + E+G+P +A L E ++ +N+++L K +R +G+ + +R + + L +G +
Subjt: IKDVVLGKRSDHCFRMVVVGDPNIELSEIGIPCHVAERLQISEHLSSWNMKKL-----------------KIYVRREGRLVRVRNVLE-----LNMGDTI
Query: YRPLADGDVVLVNRPPSIHQHSLIALSVKLLPVSAVLSLNPLCCSPFRGDFDGDCLHGYVPQSLEARVEVRELVSLDRQLINGQSGRNLLSLSHDSLTAA
R L DGD VL NR PS+H+ S++ ++++P S LN SP+ DFDGD ++ +VPQS E R EV EL+ + + +++ Q+ R ++ + D+L
Subjt: YRPLADGDVVLVNRPPSIHQHSLIALSVKLLPVSAVLSLNPLCCSPFRGDFDGDCLHGYVPQSLEARVEVRELVSLDRQLINGQSGRNLLSLSHDSLTAA
Query: HLIL--EDGVSLNLFQMQQLQMLTLHQLLP-PAIVKSPLLRNCAWTGKQLFSILLPPD---FEYSS------------PSHNVFIEKGELI---------
I + + ++F + +P PAI+K L WTGKQ+F++++P YS+ V IE+GEL+
Subjt: HLIL--EDGVSLNLFQMQQLQMLTLHQLLP-PAIVKSPLLRNCAWTGKQLFSILLPPD---FEYSS------------PSHNVFIEKGELI---------
Query: -SSEGS----YWLRDSGRNLFQALIEHCEGKTLDYLRDAQGLVPLCGFILSQNMMDDIFCGLQEAEETCNLKQLMVDSHKEILTGNDEDNQHLLSIAVEH
+S GS W + G + + + H + +L + + I + M+ I E N K + D ++ G + D + ++
Subjt: -SSEGS----YWLRDSGRNLFQALIEHCEGKTLDYLRDAQGLVPLCGFILSQNMMDDIFCGLQEAEETCNLKQLMVDSHKEILTGNDEDNQHLLSIAVEH
Query: LIYEKQKSAALNQASVDAFKKVFRDIQNLVHKYSGKDNSLLTMFKAGSKGNLMKLVQHSMCLGLQHSLVTLSFSLPHKLSCSAWNSQKMPRYIQEDGLPD
+E + + LN+A DA + K + N+L M AGSKG+ + + Q + C+G Q ++ K ++ + +P + ++D P+
Subjt: LIYEKQKSAALNQASVDAFKKVFRDIQNLVHKYSGKDNSLLTMFKAGSKGNLMKLVQHSMCLGLQHSLVTLSFSLPHKLSCSAWNSQKMPRYIQEDGLPD
Query: RTQSFIPYAVVENSFLSGLNPFECFAHSVTNRDSSFSDNAEV--PGTLTRKLTFLMRDIYTAYDGTVRNAYGNQLVQFCYDIDRPTSVSSES
VENS+L GL P E F H++ R+ + G + R+L M DI YDGTVRN+ G+ ++QF Y D +V ES
Subjt: RTQSFIPYAVVENSFLSGLNPFECFAHSVTNRDSSFSDNAEV--PGTLTRKLTFLMRDIYTAYDGTVRNAYGNQLVQFCYDIDRPTSVSSES
|
|
| AT5G60040.1 nuclear RNA polymerase C1 | 1.8e-35 | 26.87 | Show/hide |
Query: GKRSDHCFRMVVVGDPNIELSEIGIPCHVAERLQISEHLSSWNMKKLKIYVRR-EGRLVRVRNVL-------------------ELNMGDTIYRPLADGD
GKR + R V+ DPN++++E+GIP +A+ L E +S N++KL+ VR + RNV EL +G + R L +GD
Subjt: GKRSDHCFRMVVVGDPNIELSEIGIPCHVAERLQISEHLSSWNMKKLKIYVRR-EGRLVRVRNVL-------------------ELNMGDTIYRPLADGD
Query: VVLVNRPPSIHQHSLIALSVKLLPVSAVLSLNPLCCSPFRGDFDGDCLHGYVPQSLEARVEVRELVSLDRQLINGQSGRNLLSLSHDSLTAAHLILE---
VVL NR PS+H+ S++ +++P L N C+P+ DFDGD ++ +VPQ+ EAR E L+ + L ++G L++ + D LT++ LI
Subjt: VVLVNRPPSIHQHSLIALSVKLLPVSAVLSLNPLCCSPFRGDFDGDCLHGYVPQSLEARVEVRELVSLDRQLINGQSGRNLLSLSHDSLTAAHLILE---
Query: --DGVSLNLFQMQQLQMLTLHQLLPPAIVKSPLLRNCAWTGKQLFSILLPP-------------DFEYSSPSHN-----------VFIEKGELISSE-GS
D + +L + L P I+K L WTGKQ+FS+LL P + + H V+ ELIS + G
Subjt: --DGVSLNLFQMQQLQMLTLHQLLPPAIVKSPLLRNCAWTGKQLFSILLPP-------------DFEYSSPSHN-----------VFIEKGELISSE-GS
Query: YWLRDSGRN-LFQALI----EHCEGKTLDYLRDAQG-LVPLCGFILSQNMMDDIFCGLQEAEETCNLKQLMVDS-HKEILTGNDEDNQHLLSIAVEHLIY
L + ++ L+ L+ H ++ L + + GF + +DD+ G + ++E + Q D H++I +E N+ L
Subjt: YWLRDSGRN-LFQALI----EHCEGKTLDYLRDAQG-LVPLCGFILSQNMMDDIFCGLQEAEETCNLKQLMVDS-HKEILTGNDEDNQHLLSIAVEHLIY
Query: EKQKSAALNQASVDAFKKVFRDIQNLVHKYSGK--------DNSLLTMFKAGSKGNLMKLVQHSMCLGLQHSLVTLSFSLPHKLSCSAWNSQKMPRYIQE
Q A L+ A + + I N + + +GK NS L M + GSKG+ + + Q C+G Q ++ + + + +P +
Subjt: EKQKSAALNQASVDAFKKVFRDIQNLVHKYSGK--------DNSLLTMFKAGSKGNLMKLVQHSMCLGLQHSLVTLSFSLPHKLSCSAWNSQKMPRYIQE
Query: DGLPDRTQSFIPYAVVENSFLSGLNPFECFAHSVTNRDSSFSDNAEVPGT--LTRKLTFLMRDIYTAYDGTVRNAYGNQLVQFCYDID
P ++S V NSF SGL E F H++ R+ + T ++R+L + D+ YD TVRNA G ++QF Y D
Subjt: DGLPDRTQSFIPYAVVENSFLSGLNPFECFAHSVTNRDSSFSDNAEVPGT--LTRKLTFLMRDIYTAYDGTVRNAYGNQLVQFCYDID
|
|
