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IVF0004957 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0004957
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionPMD domain-containing protein
Genome locationchr10:5798142..5798524
RNA-Seq ExpressionIVF0004957
SyntenyIVF0004957
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047861.1 hypothetical protein E6C27_scaffold133G001270 [Cucumis melo var. makuwa]9.63e-3669.7Show/hide
Query:  MAATLEEEVKKYKDESDSSKSDRHWKRPLKKVKVSGDDPDGRGSSALGVLDVPPV------------LGSDESLTGPHVVDLAIEEVATSKTLVSKPAE
        M ATLEEE+ ++KDESD SK+DRHWKRPLKKVKVSGDDP GRGSSALG+ +VPP+            L SDESLTGPH VDLAI+EV T KT+VSKPAE
Subjt:  MAATLEEEVKKYKDESDSSKSDRHWKRPLKKVKVSGDDPDGRGSSALGVLDVPPV------------LGSDESLTGPHVVDLAIEEVATSKTLVSKPAE

KAA0052185.1 hypothetical protein E6C27_scaffold1855G00090 [Cucumis melo var. makuwa]1.56e-53100Show/hide
Query:  MAATLEEEVKKYKDESDSSKSDRHWKRPLKKVKVSGDDPDGRGSSALGVLDVPPVLGSDESLTGPHVVDLAIEEVATSKTLVSKPAE
        MAATLEEEVKKYKDESDSSKSDRHWKRPLKKVKVSGDDPDGRGSSALGVLDVPPVLGSDESLTGPHVVDLAIEEVATSKTLVSKPAE
Subjt:  MAATLEEEVKKYKDESDSSKSDRHWKRPLKKVKVSGDDPDGRGSSALGVLDVPPVLGSDESLTGPHVVDLAIEEVATSKTLVSKPAE

KAA0059891.1 hypothetical protein E6C27_scaffold108G001850 [Cucumis melo var. makuwa]1.22e-3468.69Show/hide
Query:  MAATLEEEVKKYKDESDSSKSDRHWKRPLKKVKVSGDDPDGRGSSALGVLDVPPV------------LGSDESLTGPHVVDLAIEEVATSKTLVSKPAE
        MAATL EE+K++KDES+SSKSDRHWK PLKK K+SGDDPDGRGSSALGV D+P +            LGSDESLTGPH VD  IEEV TSKT VSK A+
Subjt:  MAATLEEEVKKYKDESDSSKSDRHWKRPLKKVKVSGDDPDGRGSSALGVLDVPPV------------LGSDESLTGPHVVDLAIEEVATSKTLVSKPAE

KAA0061876.1 hypothetical protein E6C27_scaffold89G001190 [Cucumis melo var. makuwa]1.62e-3680.46Show/hide
Query:  MAATLEEEVKKYKDESDSSKSDRHWKRPLKKVKVSGDDPDGRGSSALGVLDVPPVLGSDESLTGPHVVDLAIEEVATSKTLVSKPAE
        MA TLEEEVK++KDESDSSKSDRHWKRPLKK KVSGD+P+GRG SALGV DVPP+LGSDESLTGPH VD A EEV T KT V+KP E
Subjt:  MAATLEEEVKKYKDESDSSKSDRHWKRPLKKVKVSGDDPDGRGSSALGVLDVPPVLGSDESLTGPHVVDLAIEEVATSKTLVSKPAE

KAA0062878.1 hypothetical protein E6C27_scaffold4427G00080 [Cucumis melo var. makuwa]3.27e-3469.7Show/hide
Query:  MAATLEEEVKKYKDESDSSKSDRHWKRPLKKVKVSGDDPDGRGSSALGVLDVPPV------------LGSDESLTGPHVVDLAIEEVATSKTLVSKPAE
        MA TLE+EVK++KDESDSSKSDRHWKRPLKK KVSGDDPDG GSSALGV DVPP+            L SDE LTGPH V+   EEV TSKT V+KPAE
Subjt:  MAATLEEEVKKYKDESDSSKSDRHWKRPLKKVKVSGDDPDGRGSSALGVLDVPPV------------LGSDESLTGPHVVDLAIEEVATSKTLVSKPAE

TrEMBL top hitse value%identityAlignment
A0A5A7U2T4 Uncharacterized protein9.4e-2769.7Show/hide
Query:  MAATLEEEVKKYKDESDSSKSDRHWKRPLKKVKVSGDDPDGRGSSALGVLDVPPV------------LGSDESLTGPHVVDLAIEEVATSKTLVSKPAE
        M ATLEEE+ ++KDESD SK+DRHWKRPLKKVKVSGDDP GRGSSALG+ +VPP+            L SDESLTGPH VDLAI+EV T KT+VSKPAE
Subjt:  MAATLEEEVKKYKDESDSSKSDRHWKRPLKKVKVSGDDPDGRGSSALGVLDVPPV------------LGSDESLTGPHVVDLAIEEVATSKTLVSKPAE

A0A5A7UEQ7 Uncharacterized protein1.8e-38100Show/hide
Query:  MAATLEEEVKKYKDESDSSKSDRHWKRPLKKVKVSGDDPDGRGSSALGVLDVPPVLGSDESLTGPHVVDLAIEEVATSKTLVSKPAE
        MAATLEEEVKKYKDESDSSKSDRHWKRPLKKVKVSGDDPDGRGSSALGVLDVPPVLGSDESLTGPHVVDLAIEEVATSKTLVSKPAE
Subjt:  MAATLEEEVKKYKDESDSSKSDRHWKRPLKKVKVSGDDPDGRGSSALGVLDVPPVLGSDESLTGPHVVDLAIEEVATSKTLVSKPAE

A0A5A7V5I2 Uncharacterized protein1.0e-2569.7Show/hide
Query:  MAATLEEEVKKYKDESDSSKSDRHWKRPLKKVKVSGDDPDGRGSSALGVLDVPPV------------LGSDESLTGPHVVDLAIEEVATSKTLVSKPAE
        MA TLE+EVK++KDESDSSKSDRHWKRPLKK KVSGDDPDG GSSALGV DVPP+            L SDE LTGPH V+   EEV TSKT V+KPAE
Subjt:  MAATLEEEVKKYKDESDSSKSDRHWKRPLKKVKVSGDDPDGRGSSALGVLDVPPV------------LGSDESLTGPHVVDLAIEEVATSKTLVSKPAE

A0A5D3CVJ1 Uncharacterized protein3.5e-2980.46Show/hide
Query:  MAATLEEEVKKYKDESDSSKSDRHWKRPLKKVKVSGDDPDGRGSSALGVLDVPPVLGSDESLTGPHVVDLAIEEVATSKTLVSKPAE
        MA TLEEEVK++KDESDSSKSDRHWKRPLKK KVSGD+P+GRG SALGV DVPP+LGSDESLTGPH VD A EEV T KT V+KP E
Subjt:  MAATLEEEVKKYKDESDSSKSDRHWKRPLKKVKVSGDDPDGRGSSALGVLDVPPVLGSDESLTGPHVVDLAIEEVATSKTLVSKPAE

A0A5D3DFN2 Uncharacterized protein1.0e-2569.7Show/hide
Query:  MAATLEEEVKKYKDESDSSKSDRHWKRPLKKVKVSGDDPDGRGSSALGVLDVPPV------------LGSDESLTGPHVVDLAIEEVATSKTLVSKPAE
        MA TLE+EVK++KDESDSSKSDRHWKRPLKK KVSGDDPDG GSSALGV DVPP+            L SDE LTGPH V+   EEV TSKT V+KPAE
Subjt:  MAATLEEEVKKYKDESDSSKSDRHWKRPLKKVKVSGDDPDGRGSSALGVLDVPPV------------LGSDESLTGPHVVDLAIEEVATSKTLVSKPAE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCTACTCTCGAGGAAGAGGTAAAGAAGTATAAAGATGAGAGCGATAGCAGCAAAAGTGATCGTCATTGGAAGAGACCTTTGAAGAAAGTGAAGGTATCAGGCGA
TGATCCCGACGGAAGGGGTTCAAGTGCTTTAGGAGTCCTTGATGTTCCACCAGTGCTAGGCAGCGATGAATCTTTGACAGGACCTCATGTAGTTGATTTGGCCATTGAAG
AAGTTGCTACCTCGAAGACCCTCGTCTCTAAACCAGCCGAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTGCTACTCTCGAGGAAGAGGTAAAGAAGTATAAAGATGAGAGCGATAGCAGCAAAAGTGATCGTCATTGGAAGAGACCTTTGAAGAAAGTGAAGGTATCAGGCGA
TGATCCCGACGGAAGGGGTTCAAGTGCTTTAGGAGTCCTTGATGTTCCACCAGTGCTAGGCAGCGATGAATCTTTGACAGGACCTCATGTAGTTGATTTGGCCATTGAAG
AAGTTGCTACCTCGAAGACCCTCGTCTCTAAACCAGCCGAATAG
Protein sequenceShow/hide protein sequence
MAATLEEEVKKYKDESDSSKSDRHWKRPLKKVKVSGDDPDGRGSSALGVLDVPPVLGSDESLTGPHVVDLAIEEVATSKTLVSKPAE