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IVF0004961 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0004961
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionSRP54 domain-containing protein
Genome locationchr04:29790699..29791491
RNA-Seq ExpressionIVF0004961
SyntenyIVF0004961
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008442853.1 PREDICTED: uncharacterized protein LOC103486621 [Cucumis melo]6.25e-55100Show/hide
Query:  MGSQGRDGEGFPAVDVERELNPGDNKHVEVDPISSQVATSLEAKEHEKRTAAEEERKRAKKKKEAMQTLKTTFIVSGIIAAVAVAAFAIVKKLREN
        MGSQGRDGEGFPAVDVERELNPGDNKHVEVDPISSQVATSLEAKEHEKRTAAEEERKRAKKKKEAMQTLKTTFIVSGIIAAVAVAAFAIVKKLREN
Subjt:  MGSQGRDGEGFPAVDVERELNPGDNKHVEVDPISSQVATSLEAKEHEKRTAAEEERKRAKKKKEAMQTLKTTFIVSGIIAAVAVAAFAIVKKLREN
XP_011652018.1 uncharacterized protein LOC105434975 [Cucumis sativus]2.10e-5396.88Show/hide
Query:  MGSQGRDGEGFPAVDVERELNPGDNKHVEVDPISSQVATSLEAKEHEKRTAAEEERKRAKKKKEAMQTLKTTFIVSGIIAAVAVAAFAIVKKLREN
        MGSQGRDGEGFPAVDVERELNPGDNKHVEVDP+SSQVATSLEAKEHEKR AAE+ERKRAKKKKEAMQTLKTTFIVSGIIAAVAVAAFAIVKKLREN
Subjt:  MGSQGRDGEGFPAVDVERELNPGDNKHVEVDPISSQVATSLEAKEHEKRTAAEEERKRAKKKKEAMQTLKTTFIVSGIIAAVAVAAFAIVKKLREN
XP_022144747.1 uncharacterized protein LOC111014362 [Momordica charantia]2.35e-3376.4Show/hide
Query:  GEGFPAVDVERELNPGDNKHVEVDPISSQVATSLEAKEHEKRTAAEEERKRAKKKKEAMQTLKTTFIVSGIIAAVAVAAFAIVKKLREN
        G  FPA DV+RELNPG N+HVEVDP+SS+VA SLE KE  KR A EEERK AKK  + M+TLKTTFIVSG+IAAVAVAAFAIVKKLREN
Subjt:  GEGFPAVDVERELNPGDNKHVEVDPISSQVATSLEAKEHEKRTAAEEERKRAKKKKEAMQTLKTTFIVSGIIAAVAVAAFAIVKKLREN
XP_022947065.1 uncharacterized protein LOC111451047 [Cucurbita moschata]1.14e-3165.05Show/hide
Query:  MGSQGRDGEG-------FPAVDVERELNPGDNKHVEVDPISSQVATSLEAKEHEKRTAAEEERKRAKKKKEAMQTLKTTFIVSGIIAAVAVAAFAIVKKL
        M S GRDG         FPAVDV+REL+PG N+HV VDPISSQVA S+E KE  KR A  EE ++  KKK+ MQTLKTTFIVSG++AAVAVAAF +VKKL
Subjt:  MGSQGRDGEG-------FPAVDVERELNPGDNKHVEVDPISSQVATSLEAKEHEKRTAAEEERKRAKKKKEAMQTLKTTFIVSGIIAAVAVAAFAIVKKL

Query:  REN
        R+N
Subjt:  REN
XP_023005785.1 uncharacterized protein LOC111498680 [Cucurbita maxima]8.06e-3266.02Show/hide
Query:  MGSQGRDGEG-------FPAVDVERELNPGDNKHVEVDPISSQVATSLEAKEHEKRTAAEEERKRAKKKKEAMQTLKTTFIVSGIIAAVAVAAFAIVKKL
        M S GRDG         FPAVDV+REL+PG N+HV VDPISSQVA S+E KE  KR A  EE ++  KKK+ MQTLKTTFIVSG+IAAVAVAAF +VKKL
Subjt:  MGSQGRDGEG-------FPAVDVERELNPGDNKHVEVDPISSQVATSLEAKEHEKRTAAEEERKRAKKKKEAMQTLKTTFIVSGIIAAVAVAAFAIVKKL

Query:  REN
        R+N
Subjt:  REN
TrEMBL top hitse value%identityAlignment
A0A0A0LBF7 Uncharacterized protein2.4e-3996.88Show/hide
Query:  MGSQGRDGEGFPAVDVERELNPGDNKHVEVDPISSQVATSLEAKEHEKRTAAEEERKRAKKKKEAMQTLKTTFIVSGIIAAVAVAAFAIVKKLREN
        MGSQGRDGEGFPAVDVERELNPGDNKHVEVDP+SSQVATSLEAKEHEKR AAE+ERKRAKKKKEAMQTLKTTFIVSGIIAAVAVAAFAIVKKLREN
Subjt:  MGSQGRDGEGFPAVDVERELNPGDNKHVEVDPISSQVATSLEAKEHEKRTAAEEERKRAKKKKEAMQTLKTTFIVSGIIAAVAVAAFAIVKKLREN
A0A1S3B6R1 uncharacterized protein LOC1034866211.7e-40100Show/hide
Query:  MGSQGRDGEGFPAVDVERELNPGDNKHVEVDPISSQVATSLEAKEHEKRTAAEEERKRAKKKKEAMQTLKTTFIVSGIIAAVAVAAFAIVKKLREN
        MGSQGRDGEGFPAVDVERELNPGDNKHVEVDPISSQVATSLEAKEHEKRTAAEEERKRAKKKKEAMQTLKTTFIVSGIIAAVAVAAFAIVKKLREN
Subjt:  MGSQGRDGEGFPAVDVERELNPGDNKHVEVDPISSQVATSLEAKEHEKRTAAEEERKRAKKKKEAMQTLKTTFIVSGIIAAVAVAAFAIVKKLREN
A0A6J1CUK2 uncharacterized protein LOC1110143623.7e-2476.4Show/hide
Query:  GEGFPAVDVERELNPGDNKHVEVDPISSQVATSLEAKEHEKRTAAEEERKRAKKKKEAMQTLKTTFIVSGIIAAVAVAAFAIVKKLREN
        G  FPA DV+RELNPG N+HVEVDP+SS+VA SLE KE  KR A EEERK A KK + M+TLKTTFIVSG+IAAVAVAAFAIVKKLREN
Subjt:  GEGFPAVDVERELNPGDNKHVEVDPISSQVATSLEAKEHEKRTAAEEERKRAKKKKEAMQTLKTTFIVSGIIAAVAVAAFAIVKKLREN
A0A6J1G5S8 uncharacterized protein LOC1114510477.0e-2367.37Show/hide
Query:  GSQGRDGEGFPAVDVERELNPGDNKHVEVDPISSQVATSLEAKEHEKRTAAEEERKRAKKKKEAMQTLKTTFIVSGIIAAVAVAAFAIVKKLREN
        G+ G  G  FPAVDV+REL+PG N+HV VDPISSQVA S+E KE  KR A  EE ++  KKK+ MQTLKTTFIVSG++AAVAVAAF +VKKLR+N
Subjt:  GSQGRDGEGFPAVDVERELNPGDNKHVEVDPISSQVATSLEAKEHEKRTAAEEERKRAKKKKEAMQTLKTTFIVSGIIAAVAVAAFAIVKKLREN
A0A6J1KYC8 uncharacterized protein LOC1114986805.3e-2368.42Show/hide
Query:  GSQGRDGEGFPAVDVERELNPGDNKHVEVDPISSQVATSLEAKEHEKRTAAEEERKRAKKKKEAMQTLKTTFIVSGIIAAVAVAAFAIVKKLREN
        G+ G  G  FPAVDV+REL+PG N+HV VDPISSQVA S+E KE  KR A  EE ++  KKK+ MQTLKTTFIVSG+IAAVAVAAF +VKKLR+N
Subjt:  GSQGRDGEGFPAVDVERELNPGDNKHVEVDPISSQVATSLEAKEHEKRTAAEEERKRAKKKKEAMQTLKTTFIVSGIIAAVAVAAFAIVKKLREN
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G52620.1 unknown protein2.0e-1452.22Show/hide
Query:  DGEGFPAVDVERELNPGDNKHVEVDPISSQVATSLEAKEHEKRTAAEEERKRAKKKKEAMQTLKTTFIVSGIIAAVAVAAFAIVKKLREN
        D   FP  D E ELNPG NK+ EVDP+SS++A+       EK     E+R+ AK K++  +TLK T IVS +I AVA AAFAI KKL+EN
Subjt:  DGEGFPAVDVERELNPGDNKHVEVDPISSQVATSLEAKEHEKRTAAEEERKRAKKKKEAMQTLKTTFIVSGIIAAVAVAAFAIVKKLREN

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAGCCAAGGAAGAGACGGGGAAGGGTTTCCAGCTGTGGACGTGGAGAGAGAGTTAAATCCAGGAGATAACAAGCACGTTGAAGTCGATCCCATTTCCTCTCAAGT
CGCTACATCTTTGGAAGCTAAGGAACATGAGAAGAGAACAGCAGCGGAAGAAGAGCGGAAGAGAGCAAAGAAGAAGAAGGAAGCAATGCAGACGTTGAAGACAACGTTCA
TCGTCTCCGGAATCATCGCTGCCGTAGCGGTGGCGGCCTTTGCCATTGTTAAGAAATTGCGTGAAAACTAA
mRNA sequenceShow/hide mRNA sequence
CAAACATAAATAAAAAGAAGAAAAAGGGAAAAAGCATTTTTTTAAAAAAAAAACAAAGGAAGGAAAAAGGGAAAAAAAGAAAAGAAAAAAGAAAAAAGGAAAAAGAATGG
GAAGCCAAGGAAGAGACGGGGAAGGGTTTCCAGCTGTGGACGTGGAGAGAGAGTTAAATCCAGGAGATAACAAGCACGTTGAAGTCGATCCCATTTCCTCTCAAGTCGCT
ACATCTTTGGAAGCTAAGGAACATGAGAAGAGAACAGCAGCGGAAGAAGAGCGGAAGAGAGCAAAGAAGAAGAAGGAAGCAATGCAGACGTTGAAGACAACGTTCATCGT
CTCCGGAATCATCGCTGCCGTAGCGGTGGCGGCCTTTGCCATTGTTAAGAAATTGCGTGAAAACTAATTCGTTTTTCTCTCAACTTTGCTCGATCCTCCCTCACTCTTAA
TCGTCTTTTTCTTTCTTCTTCTCTTTTTTGTTTTGTTTGACGTGTGTGTTGTTTAATGGGAAAATGGTTAAATTAAAAGTTTATGGTGAGAAAAAGGTTTTCTTTTGTTA
GAATATCAAAAGAAAGAGAGATTTTTTTTTATATATGTTGTTACATAATTTATGCTATTAAATATATATAAAC
Protein sequenceShow/hide protein sequence
MGSQGRDGEGFPAVDVERELNPGDNKHVEVDPISSQVATSLEAKEHEKRTAAEEERKRAKKKKEAMQTLKTTFIVSGIIAAVAVAAFAIVKKLREN