; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0004989 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0004989
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionTy1-copia retrotransposon protein
Genome locationchr06:7814180..7822770
RNA-Seq ExpressionIVF0004989
SyntenyIVF0004989
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR025724 - GAG-pre-integrase domain
IPR036875 - Zinc finger, CCHC-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036643.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa]6.82e-15290.27Show/hide
Query:  RDRTKQEKGHKGKNSEKRQFKAHGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQANLVEQDNEIIAAIVEANLIENKTDWILDTGASRHFCTN
        RDRTKQEKGHKGKNSEKRQFK  GGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQANL EQD+EIIAAIVEANLIENKTDWILDTGASRHFCTN
Subjt:  RDRTKQEKGHKGKNSEKRQFKAHGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQANLVEQDNEIIAAIVEANLIENKTDWILDTGASRHFCTN

Query:  RELLHDYKDTTDGECVFMENSATTRVIGKGKVILNLTSGKTLSLSNVLYVPSLRRNLVSGSMLNQVGLKTVLEDDKVVLTKNEDFVGKGYLSNGLFVLNT
        RELLHDY+DT DGECVFM NSAT  VIGKGKVIL LTSGKTLSLSNVLYVPSLRRNLVSGS+LN+ GLK VLE DKVVLTKN DFVGKGYLSNGLFVLNT
Subjt:  RELLHDYKDTTDGECVFMENSATTRVIGKGKVILNLTSGKTLSLSNVLYVPSLRRNLVSGSMLNQVGLKTVLEDDKVVLTKNEDFVGKGYLSNGLFVLNT

Query:  IFINENASSSAYVIESVNLWHGRLGHVNFASIRKLKDLRLINTSESHETGKCPICVE
        I +N NASSSAY+IES NLWHGRLGHVNFASIRKLKD+RLINTSE+HETGKC IC+E
Subjt:  IFINENASSSAYVIESVNLWHGRLGHVNFASIRKLKDLRLINTSESHETGKCPICVE

KAA0049793.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa]4.95e-15990.66Show/hide
Query:  RDRTKQEKGHKGKNSEKRQFKAHGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQANLVEQDNEIIAAIVEANLIENKTDWILDTGASRHFCTN
        RDRTKQEKGHKGKNSEKRQFK  GGQIKKKKLVCYVCGKEGHKSYQCNQRKGRP+QKPTPQANL EQD+EIIAAIVEANLIENKTDWILDTGASRHFCTN
Subjt:  RDRTKQEKGHKGKNSEKRQFKAHGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQANLVEQDNEIIAAIVEANLIENKTDWILDTGASRHFCTN

Query:  RELLHDYKDTTDGECVFMENSATTRVIGKGKVILNLTSGKTLSLSNVLYVPSLRRNLVSGSMLNQVGLKTVLEDDKVVLTKNEDFVGKGYLSNGLFVLNT
        RELLHDY+DT DGECVFM NSAT  VIGKGKVIL LTSGKTLSLSNVLYVPSLRRNLVSGS+LNQVGLK VLE DKVVLTKN DFVGKGYLSNGLFVLNT
Subjt:  RELLHDYKDTTDGECVFMENSATTRVIGKGKVILNLTSGKTLSLSNVLYVPSLRRNLVSGSMLNQVGLKTVLEDDKVVLTKNEDFVGKGYLSNGLFVLNT

Query:  IFINENASSSAYVIESVNLWHGRLGHVNFASIRKLKDLRLINTSESHETGKCPICVE
        I +N NASSSAY+IES NLWHGRLGHVNFASIRKLKDLRLINTSE+HETGKC +C+E
Subjt:  IFINENASSSAYVIESVNLWHGRLGHVNFASIRKLKDLRLINTSESHETGKCPICVE

KAA0053505.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa]6.48e-15289.88Show/hide
Query:  RDRTKQEKGHKGKNSEKRQFKAHGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQANLVEQDNEIIAAIVEANLIENKTDWILDTGASRHFCTN
        RDRTKQEKGHKGKNSEKRQFK  GGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQA+L EQD+EIIAAIVEANLIENKTDWILDTGASRHFCTN
Subjt:  RDRTKQEKGHKGKNSEKRQFKAHGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQANLVEQDNEIIAAIVEANLIENKTDWILDTGASRHFCTN

Query:  RELLHDYKDTTDGECVFMENSATTRVIGKGKVILNLTSGKTLSLSNVLYVPSLRRNLVSGSMLNQVGLKTVLEDDKVVLTKNEDFVGKGYLSNGLFVLNT
        RELLHDY+DT DGECVFM NSAT  VIGKGKVIL LTSGKTLSLSNVLYVPSLRRNLV GS+LN+ GLK VLE DKVV TKN DFVGKGYLSNGLFVLNT
Subjt:  RELLHDYKDTTDGECVFMENSATTRVIGKGKVILNLTSGKTLSLSNVLYVPSLRRNLVSGSMLNQVGLKTVLEDDKVVLTKNEDFVGKGYLSNGLFVLNT

Query:  IFINENASSSAYVIESVNLWHGRLGHVNFASIRKLKDLRLINTSESHETGKCPICVE
        I +NENASSSAY+IES NLWHGRLGHVNFASIRKLKDLRLINTSE+HETGKCP+C+E
Subjt:  IFINENASSSAYVIESVNLWHGRLGHVNFASIRKLKDLRLINTSESHETGKCPICVE

TYK01594.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa]1.51e-169100Show/hide
Query:  DRTKQEKGHKGKNSEKRQFKAHGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQANLVEQDNEIIAAIVEANLIENKTDWILDTGASRHFCTNR
        DRTKQEKGHKGKNSEKRQFKAHGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQANLVEQDNEIIAAIVEANLIENKTDWILDTGASRHFCTNR
Subjt:  DRTKQEKGHKGKNSEKRQFKAHGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQANLVEQDNEIIAAIVEANLIENKTDWILDTGASRHFCTNR

Query:  ELLHDYKDTTDGECVFMENSATTRVIGKGKVILNLTSGKTLSLSNVLYVPSLRRNLVSGSMLNQVGLKTVLEDDKVVLTKNEDFVGKGYLSNGLFVLNTI
        ELLHDYKDTTDGECVFMENSATTRVIGKGKVILNLTSGKTLSLSNVLYVPSLRRNLVSGSMLNQVGLKTVLEDDKVVLTKNEDFVGKGYLSNGLFVLNTI
Subjt:  ELLHDYKDTTDGECVFMENSATTRVIGKGKVILNLTSGKTLSLSNVLYVPSLRRNLVSGSMLNQVGLKTVLEDDKVVLTKNEDFVGKGYLSNGLFVLNTI

Query:  FINENASSSAYVIESVNLWHGRLGHVNFASIRKLKDLRLINTSESHET
        FINENASSSAYVIESVNLWHGRLGHVNFASIRKLKDLRLINTSESHET
Subjt:  FINENASSSAYVIESVNLWHGRLGHVNFASIRKLKDLRLINTSESHET

TYK12114.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa]2.45e-15490.66Show/hide
Query:  RDRTKQEKGHKGKNSEKRQFKAHGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQANLVEQDNEIIAAIVEANLIENKTDWILDTGASRHFCTN
        RDRTKQEKGHKGKNSEKRQFK  GGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQANL EQD+EIIAAIVEANLIENKTDWILDTGASRHFCTN
Subjt:  RDRTKQEKGHKGKNSEKRQFKAHGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQANLVEQDNEIIAAIVEANLIENKTDWILDTGASRHFCTN

Query:  RELLHDYKDTTDGECVFMENSATTRVIGKGKVILNLTSGKTLSLSNVLYVPSLRRNLVSGSMLNQVGLKTVLEDDKVVLTKNEDFVGKGYLSNGLFVLNT
        RELLHDY+DT DGECVFM NSAT  VIGKGKVIL LTSGKTLSLSNVLYVPSLRRNLVSGS+LN+VGLK VLE DKVVLTKN DFVGKGYLSNGLFVLNT
Subjt:  RELLHDYKDTTDGECVFMENSATTRVIGKGKVILNLTSGKTLSLSNVLYVPSLRRNLVSGSMLNQVGLKTVLEDDKVVLTKNEDFVGKGYLSNGLFVLNT

Query:  IFINENASSSAYVIESVNLWHGRLGHVNFASIRKLKDLRLINTSESHETGKCPICVE
        I +N NASSSAY+IES NLWHGRLGHVNFASIRKLKD+RLINTSE+HETGKC IC+E
Subjt:  IFINENASSSAYVIESVNLWHGRLGHVNFASIRKLKDLRLINTSESHETGKCPICVE

TrEMBL top hitse value%identityAlignment
A0A5A7U1P8 Ty1-copia retrotransposon protein1.0e-12790.66Show/hide
Query:  RDRTKQEKGHKGKNSEKRQFKAHGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQANLVEQDNEIIAAIVEANLIENKTDWILDTGASRHFCTN
        RDRTKQEKGHKGKNSEKRQFK  GGQIKKKKLVCYVCGKEGHKSYQCNQRKGRP+QKPTPQANL EQD+EIIAAIVEANLIENKTDWILDTGASRHFCTN
Subjt:  RDRTKQEKGHKGKNSEKRQFKAHGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQANLVEQDNEIIAAIVEANLIENKTDWILDTGASRHFCTN

Query:  RELLHDYKDTTDGECVFMENSATTRVIGKGKVILNLTSGKTLSLSNVLYVPSLRRNLVSGSMLNQVGLKTVLEDDKVVLTKNEDFVGKGYLSNGLFVLNT
        RELLHDY+DT DGECVFM NSAT  VIGKGKVIL LTSGKTLSLSNVLYVPSLRRNLVSGS+LNQVGLK VLE DKVVLTKN DFVGKGYLSNGLFVLNT
Subjt:  RELLHDYKDTTDGECVFMENSATTRVIGKGKVILNLTSGKTLSLSNVLYVPSLRRNLVSGSMLNQVGLKTVLEDDKVVLTKNEDFVGKGYLSNGLFVLNT

Query:  IFINENASSSAYVIESVNLWHGRLGHVNFASIRKLKDLRLINTSESHETGKCPICVE
        I +N NASSSAY+IES NLWHGRLGHVNFASIRKLKDLRLINTSE+HETGKC +C+E
Subjt:  IFINENASSSAYVIESVNLWHGRLGHVNFASIRKLKDLRLINTSESHETGKCPICVE

A0A5D3BQZ6 Ty1-copia retrotransposon protein3.0e-135100Show/hide
Query:  DRTKQEKGHKGKNSEKRQFKAHGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQANLVEQDNEIIAAIVEANLIENKTDWILDTGASRHFCTNR
        DRTKQEKGHKGKNSEKRQFKAHGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQANLVEQDNEIIAAIVEANLIENKTDWILDTGASRHFCTNR
Subjt:  DRTKQEKGHKGKNSEKRQFKAHGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQANLVEQDNEIIAAIVEANLIENKTDWILDTGASRHFCTNR

Query:  ELLHDYKDTTDGECVFMENSATTRVIGKGKVILNLTSGKTLSLSNVLYVPSLRRNLVSGSMLNQVGLKTVLEDDKVVLTKNEDFVGKGYLSNGLFVLNTI
        ELLHDYKDTTDGECVFMENSATTRVIGKGKVILNLTSGKTLSLSNVLYVPSLRRNLVSGSMLNQVGLKTVLEDDKVVLTKNEDFVGKGYLSNGLFVLNTI
Subjt:  ELLHDYKDTTDGECVFMENSATTRVIGKGKVILNLTSGKTLSLSNVLYVPSLRRNLVSGSMLNQVGLKTVLEDDKVVLTKNEDFVGKGYLSNGLFVLNTI

Query:  FINENASSSAYVIESVNLWHGRLGHVNFASIRKLKDLRLINTSESHET
        FINENASSSAYVIESVNLWHGRLGHVNFASIRKLKDLRLINTSESHET
Subjt:  FINENASSSAYVIESVNLWHGRLGHVNFASIRKLKDLRLINTSESHET

A0A5D3BZI1 Ty1-copia retrotransposon protein6.0e-12890.66Show/hide
Query:  RDRTKQEKGHKGKNSEKRQFKAHGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQANLVEQDNEIIAAIVEANLIENKTDWILDTGASRHFCTN
        RDRTKQEKGHKGKNSEKRQFK  GGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQANL EQD+EIIAAIVEANLIENKTDWILDTGASRHFCTN
Subjt:  RDRTKQEKGHKGKNSEKRQFKAHGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQANLVEQDNEIIAAIVEANLIENKTDWILDTGASRHFCTN

Query:  RELLHDYKDTTDGECVFMENSATTRVIGKGKVILNLTSGKTLSLSNVLYVPSLRRNLVSGSMLNQVGLKTVLEDDKVVLTKNEDFVGKGYLSNGLFVLNT
        RELLHDY+DT DGECVFM NSAT  VIGKGKVIL LTSGKTLSLSNVLYVPSLRRNLVSGS+LN+ GLK VLE DKVVLTKN DFVGKGYLSNGLFVLNT
Subjt:  RELLHDYKDTTDGECVFMENSATTRVIGKGKVILNLTSGKTLSLSNVLYVPSLRRNLVSGSMLNQVGLKTVLEDDKVVLTKNEDFVGKGYLSNGLFVLNT

Query:  IFINENASSSAYVIESVNLWHGRLGHVNFASIRKLKDLRLINTSESHETGKCPICVE
        I +N NASSSAY+IES NLWHGRLGHVNFASIRKLKD+RLINTSE+HETGKCPIC+E
Subjt:  IFINENASSSAYVIESVNLWHGRLGHVNFASIRKLKDLRLINTSESHETGKCPICVE

A0A5D3CLR6 Ty1-copia retrotransposon protein1.7e-12790.66Show/hide
Query:  RDRTKQEKGHKGKNSEKRQFKAHGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQANLVEQDNEIIAAIVEANLIENKTDWILDTGASRHFCTN
        RDRTKQEKGHKGKNSEKRQFK  GGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQANL EQD+EIIAAIVEANLIENKTDWILDTGASRHFCTN
Subjt:  RDRTKQEKGHKGKNSEKRQFKAHGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQANLVEQDNEIIAAIVEANLIENKTDWILDTGASRHFCTN

Query:  RELLHDYKDTTDGECVFMENSATTRVIGKGKVILNLTSGKTLSLSNVLYVPSLRRNLVSGSMLNQVGLKTVLEDDKVVLTKNEDFVGKGYLSNGLFVLNT
        RELLHDY+DT DGECVFM NSAT  VIGKGKVIL LTSGKTLSLSNVLYVPSLRRNLVSGS+LN+VGLK VLE DKVVLTKN DFVGKGYLSNGLFVLNT
Subjt:  RELLHDYKDTTDGECVFMENSATTRVIGKGKVILNLTSGKTLSLSNVLYVPSLRRNLVSGSMLNQVGLKTVLEDDKVVLTKNEDFVGKGYLSNGLFVLNT

Query:  IFINENASSSAYVIESVNLWHGRLGHVNFASIRKLKDLRLINTSESHETGKCPICVE
        I +N NASSSAY+IES NLWHGRLGHVNFASIRKLKD+RLINTSE+HETGKC IC+E
Subjt:  IFINENASSSAYVIESVNLWHGRLGHVNFASIRKLKDLRLINTSESHETGKCPICVE

A0A5D3DJE2 Ty1-copia retrotransposon protein5.1e-12790.27Show/hide
Query:  RDRTKQEKGHKGKNSEKRQFKAHGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQANLVEQDNEIIAAIVEANLIENKTDWILDTGASRHFCTN
        RDRTKQEKGHKGKNSEKRQFK  GGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQANL EQD+EIIAAIVEANLIENKTDWILDTGASRHFCTN
Subjt:  RDRTKQEKGHKGKNSEKRQFKAHGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQANLVEQDNEIIAAIVEANLIENKTDWILDTGASRHFCTN

Query:  RELLHDYKDTTDGECVFMENSATTRVIGKGKVILNLTSGKTLSLSNVLYVPSLRRNLVSGSMLNQVGLKTVLEDDKVVLTKNEDFVGKGYLSNGLFVLNT
        RELLHDY+DT DGECVFM NSAT  VIGKGKVIL LTSGKTLSLSNVLYVPSLRRNLVSGS+LN+ GLK VLE DKVVLTKN DFVGKGYLSNGLFVLNT
Subjt:  RELLHDYKDTTDGECVFMENSATTRVIGKGKVILNLTSGKTLSLSNVLYVPSLRRNLVSGSMLNQVGLKTVLEDDKVVLTKNEDFVGKGYLSNGLFVLNT

Query:  IFINENASSSAYVIESVNLWHGRLGHVNFASIRKLKDLRLINTSESHETGKCPICVE
        I +N NASSSAY+IES NLWHGRLGHVNFASIRKLKD+RLINTSE+HETGKC IC+E
Subjt:  IFINENASSSAYVIESVNLWHGRLGHVNFASIRKLKDLRLINTSESHETGKCPICVE

SwissProt top hitse value%identityAlignment
P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-942.1e-1625.66Show/hide
Query:  EYIEVIKSDLQDQAMNRFVEQQMLTCFKEFKDNCHRHFKRDRTKQEKGHKGKNSEKRQFKAHGGQIKKKKLVCYVCGKEGHKSYQC-NQRKGR---PSQK
        E  +V  + L ++ M +  E Q      E +   ++    +  +     K KN  K + +            CY C + GH    C N RKG+     QK
Subjt:  EYIEVIKSDLQDQAMNRFVEQQMLTCFKEFKDNCHRHFKRDRTKQEKGHKGKNSEKRQFKAHGGQIKKKKLVCYVCGKEGHKSYQC-NQRKGR---PSQK

Query:  PTPQANLVEQDNEIIAAIVE-----ANLIENKTDWILDTGASRHFCTNRELLHDYKDTTDGECVFMENSATTRVIGKGKVILNLTSGKTLSLSNVLYVPS
               + Q+N+ +   +       +L   +++W++DT AS H    R+L   Y    D   V M N++ +++ G G + +    G TL L +V +VP 
Subjt:  PTPQANLVEQDNEIIAAIVE-----ANLIENKTDWILDTGASRHFCTNRELLHDYKDTTDGECVFMENSATTRVIGKGKVILNLTSGKTLSLSNVLYVPS

Query:  LRRNLVSGSMLNQVGLKTVLEDDKVVLTKNEDFVGKGYLSNGLFVLNTIFINENASSSAYVIESVNLWHGRLGHVNFASIRKLKDLRLINTSESHETGKC
        LR NL+SG  L++ G ++   + K  LTK    + KG     L+  N        +++   I SV+LWH R+GH++   ++ L    LI+ ++      C
Subjt:  LRRNLVSGSMLNQVGLKTVLEDDKVVLTKNEDFVGKGYLSNGLFVLNTIFINENASSSAYVIESVNLWHGRLGHVNFASIRKLKDLRLINTSESHETGKC

Query:  PICV
          C+
Subjt:  PICV

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE11.0e-0723.19Show/hide
Query:  DNCHRHFKRDRTKQEKGHKGKNSEKRQFKAHGGQIKKKKLVCYVCGKEGHKSYQCNQRKG-----RPSQKPTPQANLVEQDNEIIAAIVEANLIENKTDW
        +N +R+ + D        K        F  +  Q K     C +CG +GH + +C+Q +         Q P+P      + N  + +   +N      +W
Subjt:  DNCHRHFKRDRTKQEKGHKGKNSEKRQFKAHGGQIKKKKLVCYVCGKEGHKSYQCNQRKG-----RPSQKPTPQANLVEQDNEIIAAIVEANLIENKTDW

Query:  ILDTGASRHFCTNRELLHDYKDTTDGECVFMENSATTRVIGKGKVILNLTSGKTLSLSNVLYVPSLRRNLVSGSML---NQVGLKTVLEDDKVVLTKNED
        +LD+GA+ H  ++   L  ++  T G+ V + + +T  +   G   L+ T  + L+L N+LYVP++ +NL+S   L   N V ++      +V       
Subjt:  ILDTGASRHFCTNRELLHDYKDTTDGECVFMENSATTRVIGKGKVILNLTSGKTLSLSNVLYVPSLRRNLVSGSML---NQVGLKTVLEDDKVVLTKNED

Query:  FVGKGYLSNGLF---VLNTIFINENASSSAYVIESVNLWHGRLGHVNFASIRK-LKDLRLINTSESHETGKCPICV
         + +G   + L+   + ++  ++  AS S+    S   WH RLGH   + +   + +  L   + SH+   C  C+
Subjt:  FVGKGYLSNGLF---VLNTIFINENASSSAYVIESVNLWHGRLGHVNFASIRK-LKDLRLINTSESHETGKCPICV

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE21.3e-0724.11Show/hide
Query:  DNCHRHFKRDRTKQ-EKGHKGKNSEKRQFKAHGGQIKKKKLVCYVCGKEGHKSYQC-----------NQRKGRPSQKPTPQANLVEQDNEIIAAIVEANL
        DN + +   +R+   +    G  S+ RQ K + G+       C +C  +GH + +C            Q+   P     P+ANL              N 
Subjt:  DNCHRHFKRDRTKQ-EKGHKGKNSEKRQFKAHGGQIKKKKLVCYVCGKEGHKSYQC-----------NQRKGRPSQKPTPQANLVEQDNEIIAAIVEANL

Query:  IENKTDWILDTGASRHFCTNRELLHDYKDTTDGECVFMENSATTRVIGKGKVILNLTSGKTLSLSNVLYVPSLRRNLVSGSML---NQVGLKTVLEDDKV
          N  +W+LD+GA+ H  ++   L  ++  T G+ V + + +T  +   G   L  TS ++L L+ VLYVP++ +NL+S   L   N+V ++      +V
Subjt:  IENKTDWILDTGASRHFCTNRELLHDYKDTTDGECVFMENSATTRVIGKGKVILNLTSGKTLSLSNVLYVPSLRRNLVSGSML---NQVGLKTVLEDDKV

Query:  VLTKNEDFVGKGYLSNGLF---VLNTIFINENASSSAYVIESVNLWHGRLGHVNFASIRK-LKDLRLINTSESHETGKCPIC
                + +G   + L+   + ++  ++  AS  +    S   WH RLGH + A +   + +  L   + SH+   C  C
Subjt:  VLTKNEDFVGKGYLSNGLF---VLNTIFINENASSSAYVIESVNLWHGRLGHVNFASIRK-LKDLRLINTSESHETGKCPIC

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGGAAAAGATCTCCCGACGCAGTCCTCGACGTCGGGACAAACGTCAGGGGAAGTGAGTCGGGATAGGCTTTCCCGACGTTGTATTGGTCACGCGTCGGGAAAGCC
TCTCCCGACGTCGTCTTTCCCGATGCAAACCACGACGTCGGGAAAGCCTCGTCTGCTTTTCCGACGCCATGTACTGCATCGGGAAAGCCTCCCCGACAGGCTTTACCGTG
CAGCTTTGTTAAGGAACCAGTTTGTCGACACTATACTGAAAGCTCGAGAAAAGCACTTGAAAAGTGGTATTATGTCTTCATTCTCGAGCAGTATCAAGGAGATAGATGCG
GTGTTCCTCAAGTTTAGCGATGATCTAAACACTGCGGAAGTGTCGTCCTCGATGGGCAACAATTCGAGTGAGTCTCTTGTAGAAACTACTCAACCATCTCTGACTCCTAG
GAGATGTGTGCAGTCTCGACTCTTGGAGTTGGAGAGTTGGGCTGACGTTAGAAGAGAATACATCGAGGTCATCAAGAGCGATCTACAAGATCAAGCTATGAATAGATTTG
TTGAGCAACAAATGCTCACTTGTTTTAAGGAGTTCAAGGACAACTGTCACAGACACTTTAAAAGAGACAGAACCAAGCAGGAAAAAGGGCATAAGGGGAAAAACTCAGAG
AAAAGACAGTTCAAGGCTCATGGGGGACAAATTAAGAAGAAAAAGCTGGTCTGTTACGTGTGCGGAAAGGAAGGACACAAATCATACCAATGTAACCAGAGGAAAGGGAG
ACCAAGTCAGAAACCAACACCTCAAGCCAATCTAGTAGAACAAGACAATGAGATCATAGCAGCCATAGTAGAGGCCAATCTAATAGAAAATAAGACGGACTGGATTCTCG
ATACTGGAGCCTCGAGACACTTCTGCACCAATCGTGAACTTCTCCATGACTACAAAGACACTACCGATGGAGAATGCGTGTTCATGGAAAACTCAGCCACTACAAGAGTA
ATCGGAAAAGGGAAGGTTATTTTAAACTTAACTTCTGGCAAAACTTTATCTCTAAGTAATGTTCTATATGTCCCTTCCTTACGTAGGAACCTGGTGTCTGGGAGTATGTT
GAATCAGGTCGGGCTTAAAACTGTACTGGAAGATGACAAAGTTGTCCTCACCAAAAATGAAGATTTTGTCGGTAAGGGGTATCTGTCTAATGGTCTGTTTGTGCTAAACA
CAATTTTCATAAATGAAAATGCTTCTAGTTCTGCCTACGTGATTGAATCTGTTAACTTATGGCATGGTAGACTAGGACATGTGAACTTTGCATCAATTAGGAAACTTAAA
GACTTGAGACTTATTAATACTTCTGAGTCGCATGAAACTGGTAAATGCCCCATTTGTGTAGAAAGATTCCCCACAAAAGGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTGGGAAAAGATCTCCCGACGCAGTCCTCGACGTCGGGACAAACGTCAGGGGAAGTGAGTCGGGATAGGCTTTCCCGACGTTGTATTGGTCACGCGTCGGGAAAGCC
TCTCCCGACGTCGTCTTTCCCGATGCAAACCACGACGTCGGGAAAGCCTCGTCTGCTTTTCCGACGCCATGTACTGCATCGGGAAAGCCTCCCCGACAGGCTTTACCGTG
CAGCTTTGTTAAGGAACCAGTTTGTCGACACTATACTGAAAGCTCGAGAAAAGCACTTGAAAAGTGGTATTATGTCTTCATTCTCGAGCAGTATCAAGGAGATAGATGCG
GTGTTCCTCAAGTTTAGCGATGATCTAAACACTGCGGAAGTGTCGTCCTCGATGGGCAACAATTCGAGTGAGTCTCTTGTAGAAACTACTCAACCATCTCTGACTCCTAG
GAGATGTGTGCAGTCTCGACTCTTGGAGTTGGAGAGTTGGGCTGACGTTAGAAGAGAATACATCGAGGTCATCAAGAGCGATCTACAAGATCAAGCTATGAATAGATTTG
TTGAGCAACAAATGCTCACTTGTTTTAAGGAGTTCAAGGACAACTGTCACAGACACTTTAAAAGAGACAGAACCAAGCAGGAAAAAGGGCATAAGGGGAAAAACTCAGAG
AAAAGACAGTTCAAGGCTCATGGGGGACAAATTAAGAAGAAAAAGCTGGTCTGTTACGTGTGCGGAAAGGAAGGACACAAATCATACCAATGTAACCAGAGGAAAGGGAG
ACCAAGTCAGAAACCAACACCTCAAGCCAATCTAGTAGAACAAGACAATGAGATCATAGCAGCCATAGTAGAGGCCAATCTAATAGAAAATAAGACGGACTGGATTCTCG
ATACTGGAGCCTCGAGACACTTCTGCACCAATCGTGAACTTCTCCATGACTACAAAGACACTACCGATGGAGAATGCGTGTTCATGGAAAACTCAGCCACTACAAGAGTA
ATCGGAAAAGGGAAGGTTATTTTAAACTTAACTTCTGGCAAAACTTTATCTCTAAGTAATGTTCTATATGTCCCTTCCTTACGTAGGAACCTGGTGTCTGGGAGTATGTT
GAATCAGGTCGGGCTTAAAACTGTACTGGAAGATGACAAAGTTGTCCTCACCAAAAATGAAGATTTTGTCGGTAAGGGGTATCTGTCTAATGGTCTGTTTGTGCTAAACA
CAATTTTCATAAATGAAAATGCTTCTAGTTCTGCCTACGTGATTGAATCTGTTAACTTATGGCATGGTAGACTAGGACATGTGAACTTTGCATCAATTAGGAAACTTAAA
GACTTGAGACTTATTAATACTTCTGAGTCGCATGAAACTGGTAAATGCCCCATTTGTGTAGAAAGATTCCCCACAAAAGGCTAG
Protein sequenceShow/hide protein sequence
MLGKDLPTQSSTSGQTSGEVSRDRLSRRCIGHASGKPLPTSSFPMQTTTSGKPRLLFRRHVLHRESLPDRLYRAALLRNQFVDTILKAREKHLKSGIMSSFSSSIKEIDA
VFLKFSDDLNTAEVSSSMGNNSSESLVETTQPSLTPRRCVQSRLLELESWADVRREYIEVIKSDLQDQAMNRFVEQQMLTCFKEFKDNCHRHFKRDRTKQEKGHKGKNSE
KRQFKAHGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQANLVEQDNEIIAAIVEANLIENKTDWILDTGASRHFCTNRELLHDYKDTTDGECVFMENSATTRV
IGKGKVILNLTSGKTLSLSNVLYVPSLRRNLVSGSMLNQVGLKTVLEDDKVVLTKNEDFVGKGYLSNGLFVLNTIFINENASSSAYVIESVNLWHGRLGHVNFASIRKLK
DLRLINTSESHETGKCPICVERFPTKG