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IVF0004995 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0004995
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionTy3-gypsy retrotransposon protein
Genome locationchr09:13652542..13658929
RNA-Seq ExpressionIVF0004995
SyntenyIVF0004995
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0062277.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]3.58e-5496.04Show/hide
Query:  MDYEGARLNIENLTSENLMPPEFLDWVRVESISSLSGTLADGVDNIGSAGVAVTKVKNEMFDDFDEDLDHVLLIERLRMLLSRRALGLTNRHVEGATRVS
        MDYEGARLNIENLTSENLMPPEFLDWVRVESISSLSGTLADGVDNIGSAGVAVTKVKNEMFDDFDEDLDHVLLIERLRMLLSRRALGLTNRHVEG   V 
Subjt:  MDYEGARLNIENLTSENLMPPEFLDWVRVESISSLSGTLADGVDNIGSAGVAVTKVKNEMFDDFDEDLDHVLLIERLRMLLSRRALGLTNRHVEGATRVS

Query:  S
        S
Subjt:  S

TYK26710.1 uncharacterized protein E5676_scaffold313G003720 [Cucumis melo var. makuwa]2.34e-59100Show/hide
Query:  MDYEGARLNIENLTSENLMPPEFLDWVRVESISSLSGTLADGVDNIGSAGVAVTKVKNEMFDDFDEDLDHVLLIERLRMLLSRRALGLTNRHVE
        MDYEGARLNIENLTSENLMPPEFLDWVRVESISSLSGTLADGVDNIGSAGVAVTKVKNEMFDDFDEDLDHVLLIERLRMLLSRRALGLTNRHVE
Subjt:  MDYEGARLNIENLTSENLMPPEFLDWVRVESISSLSGTLADGVDNIGSAGVAVTKVKNEMFDDFDEDLDHVLLIERLRMLLSRRALGLTNRHVE

XP_008460540.1 PREDICTED: uncharacterized protein LOC103499334 isoform X1 [Cucumis melo]2.58e-5596.04Show/hide
Query:  MDYEGARLNIENLTSENLMPPEFLDWVRVESISSLSGTLADGVDNIGSAGVAVTKVKNEMFDDFDEDLDHVLLIERLRMLLSRRALGLTNRHVEGATRVS
        MDYEGARLNIENLTSENLMPPEFLDWVRVESISSLSGTLADGVDNIGSAGVAVTKVKNEMFDDFDEDLDHVLLIERLRMLLSRRALGLTNRHVEG   V 
Subjt:  MDYEGARLNIENLTSENLMPPEFLDWVRVESISSLSGTLADGVDNIGSAGVAVTKVKNEMFDDFDEDLDHVLLIERLRMLLSRRALGLTNRHVEGATRVS

Query:  S
        S
Subjt:  S

XP_008460542.1 PREDICTED: uncharacterized protein LOC103499334 isoform X2 [Cucumis melo]1.55e-5596.04Show/hide
Query:  MDYEGARLNIENLTSENLMPPEFLDWVRVESISSLSGTLADGVDNIGSAGVAVTKVKNEMFDDFDEDLDHVLLIERLRMLLSRRALGLTNRHVEGATRVS
        MDYEGARLNIENLTSENLMPPEFLDWVRVESISSLSGTLADGVDNIGSAGVAVTKVKNEMFDDFDEDLDHVLLIERLRMLLSRRALGLTNRHVEG   V 
Subjt:  MDYEGARLNIENLTSENLMPPEFLDWVRVESISSLSGTLADGVDNIGSAGVAVTKVKNEMFDDFDEDLDHVLLIERLRMLLSRRALGLTNRHVEGATRVS

Query:  S
        S
Subjt:  S

XP_008460549.1 PREDICTED: uncharacterized protein LOC103499334 isoform X4 [Cucumis melo]2.65e-5696.04Show/hide
Query:  MDYEGARLNIENLTSENLMPPEFLDWVRVESISSLSGTLADGVDNIGSAGVAVTKVKNEMFDDFDEDLDHVLLIERLRMLLSRRALGLTNRHVEGATRVS
        MDYEGARLNIENLTSENLMPPEFLDWVRVESISSLSGTLADGVDNIGSAGVAVTKVKNEMFDDFDEDLDHVLLIERLRMLLSRRALGLTNRHVEG   V 
Subjt:  MDYEGARLNIENLTSENLMPPEFLDWVRVESISSLSGTLADGVDNIGSAGVAVTKVKNEMFDDFDEDLDHVLLIERLRMLLSRRALGLTNRHVEGATRVS

Query:  S
        S
Subjt:  S

TrEMBL top hitse value%identityAlignment
A0A1S3CCP8 uncharacterized protein LOC103499334 isoform X23.3e-4596.04Show/hide
Query:  MDYEGARLNIENLTSENLMPPEFLDWVRVESISSLSGTLADGVDNIGSAGVAVTKVKNEMFDDFDEDLDHVLLIERLRMLLSRRALGLTNRHVEGATRVS
        MDYEGARLNIENLTSENLMPPEFLDWVRVESISSLSGTLADGVDNIGSAGVAVTKVKNEMFDDFDEDLDHVLLIERLRMLLSRRALGLTNRHVEG   V 
Subjt:  MDYEGARLNIENLTSENLMPPEFLDWVRVESISSLSGTLADGVDNIGSAGVAVTKVKNEMFDDFDEDLDHVLLIERLRMLLSRRALGLTNRHVEGATRVS

Query:  S
        S
Subjt:  S

A0A1S3CCT1 uncharacterized protein LOC103499334 isoform X13.3e-4596.04Show/hide
Query:  MDYEGARLNIENLTSENLMPPEFLDWVRVESISSLSGTLADGVDNIGSAGVAVTKVKNEMFDDFDEDLDHVLLIERLRMLLSRRALGLTNRHVEGATRVS
        MDYEGARLNIENLTSENLMPPEFLDWVRVESISSLSGTLADGVDNIGSAGVAVTKVKNEMFDDFDEDLDHVLLIERLRMLLSRRALGLTNRHVEG   V 
Subjt:  MDYEGARLNIENLTSENLMPPEFLDWVRVESISSLSGTLADGVDNIGSAGVAVTKVKNEMFDDFDEDLDHVLLIERLRMLLSRRALGLTNRHVEGATRVS

Query:  S
        S
Subjt:  S

A0A1S3CDY5 uncharacterized protein LOC103499334 isoform X43.3e-4596.04Show/hide
Query:  MDYEGARLNIENLTSENLMPPEFLDWVRVESISSLSGTLADGVDNIGSAGVAVTKVKNEMFDDFDEDLDHVLLIERLRMLLSRRALGLTNRHVEGATRVS
        MDYEGARLNIENLTSENLMPPEFLDWVRVESISSLSGTLADGVDNIGSAGVAVTKVKNEMFDDFDEDLDHVLLIERLRMLLSRRALGLTNRHVEG   V 
Subjt:  MDYEGARLNIENLTSENLMPPEFLDWVRVESISSLSGTLADGVDNIGSAGVAVTKVKNEMFDDFDEDLDHVLLIERLRMLLSRRALGLTNRHVEGATRVS

Query:  S
        S
Subjt:  S

A0A5A7V5P6 Ty3-gypsy retrotransposon protein3.3e-4596.04Show/hide
Query:  MDYEGARLNIENLTSENLMPPEFLDWVRVESISSLSGTLADGVDNIGSAGVAVTKVKNEMFDDFDEDLDHVLLIERLRMLLSRRALGLTNRHVEGATRVS
        MDYEGARLNIENLTSENLMPPEFLDWVRVESISSLSGTLADGVDNIGSAGVAVTKVKNEMFDDFDEDLDHVLLIERLRMLLSRRALGLTNRHVEG   V 
Subjt:  MDYEGARLNIENLTSENLMPPEFLDWVRVESISSLSGTLADGVDNIGSAGVAVTKVKNEMFDDFDEDLDHVLLIERLRMLLSRRALGLTNRHVEGATRVS

Query:  S
        S
Subjt:  S

A0A5D3DTU4 Uncharacterized protein3.7e-44100Show/hide
Query:  MDYEGARLNIENLTSENLMPPEFLDWVRVESISSLSGTLADGVDNIGSAGVAVTKVKNEMFDDFDEDLDHVLLIERLRMLLSRRALGLTNRHVE
        MDYEGARLNIENLTSENLMPPEFLDWVRVESISSLSGTLADGVDNIGSAGVAVTKVKNEMFDDFDEDLDHVLLIERLRMLLSRRALGLTNRHVE
Subjt:  MDYEGARLNIENLTSENLMPPEFLDWVRVESISSLSGTLADGVDNIGSAGVAVTKVKNEMFDDFDEDLDHVLLIERLRMLLSRRALGLTNRHVE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACTACGAGGGGGCTCGATTAAATATAGAGAACCTGACTTCTGAGAATCTAATGCCACCTGAATTTCTTGATTGGGTAAGGGTGGAATCGATAAGCAGCTTATCAGG
TACCTTGGCAGATGGTGTAGATAACATTGGTTCTGCTGGTGTGGCTGTAACTAAGGTTAAAAATGAGATGTTTGATGACTTTGATGAAGATCTTGATCATGTTTTATTGA
TAGAGCGACTAAGGATGCTCCTATCAAGGCGAGCATTGGGTTTGACAAATCGACATGTGGAGGGGGCGACTAGGGTTTCGTCGGTATTGATGGTGGTGGCTAGGGTTTCT
TAA
mRNA sequenceShow/hide mRNA sequence
ATGGACTACGAGGGGGCTCGATTAAATATAGAGAACCTGACTTCTGAGAATCTAATGCCACCTGAATTTCTTGATTGGGTAAGGGTGGAATCGATAAGCAGCTTATCAGG
TACCTTGGCAGATGGTGTAGATAACATTGGTTCTGCTGGTGTGGCTGTAACTAAGGTTAAAAATGAGATGTTTGATGACTTTGATGAAGATCTTGATCATGTTTTATTGA
TAGAGCGACTAAGGATGCTCCTATCAAGGCGAGCATTGGGTTTGACAAATCGACATGTGGAGGGGGCGACTAGGGTTTCGTCGGTATTGATGGTGGTGGCTAGGGTTTCT
TAA
Protein sequenceShow/hide protein sequence
MDYEGARLNIENLTSENLMPPEFLDWVRVESISSLSGTLADGVDNIGSAGVAVTKVKNEMFDDFDEDLDHVLLIERLRMLLSRRALGLTNRHVEGATRVSSVLMVVARVS