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IVF0005065 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0005065
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionPMD domain-containing protein
Genome locationchr10:25684666..25684854
RNA-Seq ExpressionIVF0005065
SyntenyIVF0005065
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049835.1 hypothetical protein E6C27_scaffold1591G00310 [Cucumis melo var. makuwa]1.41e-2277.59Show/hide
Query:  MDATLEEEVKEHKDESDISKSDRHWKRPLKKAKVSVDDPDGRGSSALGVPDVPPLVCT
        M  TLEEE+KEHKD+SD SKSD HWKR LKK KVS DDPDGRGS++LGVP+VPPLV T
Subjt:  MDATLEEEVKEHKDESDISKSDRHWKRPLKKAKVSVDDPDGRGSSALGVPDVPPLVCT

KAA0052185.1 hypothetical protein E6C27_scaffold1855G00090 [Cucumis melo var. makuwa]7.18e-2383.93Show/hide
Query:  MDATLEEEVKEHKDESDISKSDRHWKRPLKKAKVSVDDPDGRGSSALGVPDVPPLV
        M ATLEEEVK++KDESD SKSDRHWKRPLKK KVS DDPDGRGSSALGV DVPP++
Subjt:  MDATLEEEVKEHKDESDISKSDRHWKRPLKKAKVSVDDPDGRGSSALGVPDVPPLV

KAA0054598.1 hypothetical protein E6C27_scaffold24G003990 [Cucumis melo var. makuwa]8.01e-2489.09Show/hide
Query:  MDATLEEEVKEHKDESDISKSDRHWKRPLKKAKVSVDDPDGRGSSALGVPDVPPL
        M ATLEEEVKE+KDESD SKSDRHWKRPLKKAKVS DDPDGRGSSA GV DVPPL
Subjt:  MDATLEEEVKEHKDESDISKSDRHWKRPLKKAKVSVDDPDGRGSSALGVPDVPPL

KAA0062878.1 hypothetical protein E6C27_scaffold4427G00080 [Cucumis melo var. makuwa]2.22e-2289.09Show/hide
Query:  MDATLEEEVKEHKDESDISKSDRHWKRPLKKAKVSVDDPDGRGSSALGVPDVPPL
        M  TLE+EVKEHKDESD SKSDRHWKRPLKKAKVS DDPDG GSSALGVPDVPPL
Subjt:  MDATLEEEVKEHKDESDISKSDRHWKRPLKKAKVSVDDPDGRGSSALGVPDVPPL

TYK22511.1 hypothetical protein E5676_scaffold387G00090 [Cucumis melo var. makuwa]2.22e-2289.09Show/hide
Query:  MDATLEEEVKEHKDESDISKSDRHWKRPLKKAKVSVDDPDGRGSSALGVPDVPPL
        M  TLE+EVKEHKDESD SKSDRHWKRPLKKAKVS DDPDG GSSALGVPDVPPL
Subjt:  MDATLEEEVKEHKDESDISKSDRHWKRPLKKAKVSVDDPDGRGSSALGVPDVPPL

TrEMBL top hitse value%identityAlignment
A0A5A7U2T4 Uncharacterized protein6.3e-1783.64Show/hide
Query:  MDATLEEEVKEHKDESDISKSDRHWKRPLKKAKVSVDDPDGRGSSALGVPDVPPL
        M ATLEEE+ EHKDESDISK+DRHWKRPLKK KVS DDP GRGSSALG+P+VPPL
Subjt:  MDATLEEEVKEHKDESDISKSDRHWKRPLKKAKVSVDDPDGRGSSALGVPDVPPL

A0A5A7V5I2 Uncharacterized protein2.2e-1789.09Show/hide
Query:  MDATLEEEVKEHKDESDISKSDRHWKRPLKKAKVSVDDPDGRGSSALGVPDVPPL
        M  TLE+EVKEHKDESD SKSDRHWKRPLKKAKVS DDPDG GSSALGVPDVPPL
Subjt:  MDATLEEEVKEHKDESDISKSDRHWKRPLKKAKVSVDDPDGRGSSALGVPDVPPL

A0A5D3BCT1 Uncharacterized protein1.7e-1787.27Show/hide
Query:  MDATLEEEVKEHKDESDISKSDRHWKRPLKKAKVSVDDPDGRGSSALGVPDVPPL
        M ATL+EE+KEHKDESD SKSDRHWKRPLKKAKVS DDPDGRGSSA GVP+VPPL
Subjt:  MDATLEEEVKEHKDESDISKSDRHWKRPLKKAKVSVDDPDGRGSSALGVPDVPPL

A0A5D3CXA5 Uncharacterized protein4.8e-1787.27Show/hide
Query:  MDATLEEEVKEHKDESDISKSDRHWKRPLKKAKVSVDDPDGRGSSALGVPDVPPL
        M   LEEEVKEHKDESD SKSDRHWKRPLKKAKVS D+PDGRG SALGVPDVPPL
Subjt:  MDATLEEEVKEHKDESDISKSDRHWKRPLKKAKVSVDDPDGRGSSALGVPDVPPL

A0A5D3DFN2 Uncharacterized protein2.2e-1789.09Show/hide
Query:  MDATLEEEVKEHKDESDISKSDRHWKRPLKKAKVSVDDPDGRGSSALGVPDVPPL
        M  TLE+EVKEHKDESD SKSDRHWKRPLKKAKVS DDPDG GSSALGVPDVPPL
Subjt:  MDATLEEEVKEHKDESDISKSDRHWKRPLKKAKVSVDDPDGRGSSALGVPDVPPL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGCTACTCTCGAGGAGGAGGTAAAAGAGCATAAAGATGAGAGCGATATTAGTAAAAGTGATCGTCATTGGAAGAGACCTTTAAAGAAAGCGAAGGTATCAGTTGA
TGATCCCGACGGAAGAGGTTCAAGTGCTTTGGGAGTCCCTGATGTTCCACCACTAGTTTGCACAAAAATGACTTATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATGCTACTCTCGAGGAGGAGGTAAAAGAGCATAAAGATGAGAGCGATATTAGTAAAAGTGATCGTCATTGGAAGAGACCTTTAAAGAAAGCGAAGGTATCAGTTGA
TGATCCCGACGGAAGAGGTTCAAGTGCTTTGGGAGTCCCTGATGTTCCACCACTAGTTTGCACAAAAATGACTTATTAA
Protein sequenceShow/hide protein sequence
MDATLEEEVKEHKDESDISKSDRHWKRPLKKAKVSVDDPDGRGSSALGVPDVPPLVCTKMTY