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IVF0005075 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0005075
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGag-pol polyprotein
Genome locationchr10:9162442..9162654
RNA-Seq ExpressionIVF0005075
SyntenyIVF0005075
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046866.1 Receptor-like protein 12 [Cucumis melo var. makuwa]4.93e-2777.14Show/hide
Query:  MAKEETIAEFNVRVLNLANESFALGEMISDSKMVQKVLRSLPARFNMKVTTIEEENDITTMKLDDLFGSL
        MA++ETI EFNVRVL+LANESFALGE  +D+KMV++VLRSL  RFNMK TTI+E NDITTMKLD+LFGSL
Subjt:  MAKEETIAEFNVRVLNLANESFALGEMISDSKMVQKVLRSLPARFNMKVTTIEEENDITTMKLDDLFGSL

KAA0050148.1 gag-proteinase polyprotein [Cucumis melo var. makuwa]8.16e-2878.57Show/hide
Query:  MAKEETIAEFNVRVLNLANESFALGEMISDSKMVQKVLRSLPARFNMKVTTIEEENDITTMKLDDLFGSL
        M  +ETIA+FNVRVL+LANESF LGE I+ SKMVQKVLRSLP+RF+MK+T IEE NDITTMKLD+LFGSL
Subjt:  MAKEETIAEFNVRVLNLANESFALGEMISDSKMVQKVLRSLPARFNMKVTTIEEENDITTMKLDDLFGSL

KAA0052224.1 gag-pol polyprotein [Cucumis melo var. makuwa]6.92e-2874.29Show/hide
Query:  MAKEETIAEFNVRVLNLANESFALGEMISDSKMVQKVLRSLPARFNMKVTTIEEENDITTMKLDDLFGSL
        M KEE IAE+NVRVL +ANESF LGE I +SK+V+KVLRSLP++F+MKVTTIEE +DITT+KLD+LFGSL
Subjt:  MAKEETIAEFNVRVLNLANESFALGEMISDSKMVQKVLRSLPARFNMKVTTIEEENDITTMKLDDLFGSL

KAA0056045.1 Receptor-like protein 12 [Cucumis melo var. makuwa]6.27e-2875.71Show/hide
Query:  MAKEETIAEFNVRVLNLANESFALGEMISDSKMVQKVLRSLPARFNMKVTTIEEENDITTMKLDDLFGSL
        M  EETIA+FNVRV++ A ESFALGE IS +KMVQKVLRSLP RFNMKVT I+E ND+T+MKLD+LFGSL
Subjt:  MAKEETIAEFNVRVLNLANESFALGEMISDSKMVQKVLRSLPARFNMKVTTIEEENDITTMKLDDLFGSL

TYK27731.1 Receptor-like protein 12 [Cucumis melo var. makuwa]3.61e-2775.71Show/hide
Query:  MAKEETIAEFNVRVLNLANESFALGEMISDSKMVQKVLRSLPARFNMKVTTIEEENDITTMKLDDLFGSL
        M  EETIA+FNVRVL+ A ESFALGE IS +KMVQKVLRSL  RFNMKVT I+E ND+T+MKLD+LFGSL
Subjt:  MAKEETIAEFNVRVLNLANESFALGEMISDSKMVQKVLRSLPARFNMKVTTIEEENDITTMKLDDLFGSL

TrEMBL top hitse value%identityAlignment
A0A5A7U4G8 Gag-proteinase polyprotein1.8e-2078.57Show/hide
Query:  MAKEETIAEFNVRVLNLANESFALGEMISDSKMVQKVLRSLPARFNMKVTTIEEENDITTMKLDDLFGSL
        M  +ETIA+FNVRVL+LANESF LGE I+ SKMVQKVLRSLP+RF+MK+T IEE NDITTMKLD+LFGSL
Subjt:  MAKEETIAEFNVRVLNLANESFALGEMISDSKMVQKVLRSLPARFNMKVTTIEEENDITTMKLDDLFGSL

A0A5A7UA40 Gag-pol polyprotein2.0e-1974.29Show/hide
Query:  MAKEETIAEFNVRVLNLANESFALGEMISDSKMVQKVLRSLPARFNMKVTTIEEENDITTMKLDDLFGSL
        M KEE IAE+NVRVL +ANESF LGE I +SK+V+KVLRSLP++F+MKVTTIEE +DITT+KLD+LFGSL
Subjt:  MAKEETIAEFNVRVLNLANESFALGEMISDSKMVQKVLRSLPARFNMKVTTIEEENDITTMKLDDLFGSL

A0A5A7UQY8 Receptor-like protein 121.2e-1975.71Show/hide
Query:  MAKEETIAEFNVRVLNLANESFALGEMISDSKMVQKVLRSLPARFNMKVTTIEEENDITTMKLDDLFGSL
        M  EETIA+FNVRV++ A ESFALGE IS +KMVQKVLRSLP RFNMKVT I+E ND+T+MKLD+LFGSL
Subjt:  MAKEETIAEFNVRVLNLANESFALGEMISDSKMVQKVLRSLPARFNMKVTTIEEENDITTMKLDDLFGSL

A0A5D3BW07 Receptor-like protein 124.0e-2077.14Show/hide
Query:  MAKEETIAEFNVRVLNLANESFALGEMISDSKMVQKVLRSLPARFNMKVTTIEEENDITTMKLDDLFGSL
        MA++ETI EFNVRVL+LANESFALGE  +D+KMV++VLRSL  RFNMK TTI+E NDITTMKLD+LFGSL
Subjt:  MAKEETIAEFNVRVLNLANESFALGEMISDSKMVQKVLRSLPARFNMKVTTIEEENDITTMKLDDLFGSL

A0A5D3CGS2 Gag-pol polyprotein2.6e-1974.29Show/hide
Query:  MAKEETIAEFNVRVLNLANESFALGEMISDSKMVQKVLRSLPARFNMKVTTIEEENDITTMKLDDLFGSL
        M KEETIA+FNVRVL++A ES ALGE +SDSK+V+KV RSLP++FNMKVTTIEE ND++ MKLD+LFGSL
Subjt:  MAKEETIAEFNVRVLNLANESFALGEMISDSKMVQKVLRSLPARFNMKVTTIEEENDITTMKLDDLFGSL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTAAAGAAGAAACCATTGCAGAATTCAATGTTCGTGTCCTGAACTTGGCTAATGAATCATTTGCACTTGGAGAAATGATCTCTGACTCTAAGATGGTCCAGAAAGT
GTTAAGATCTCTTCCTGCTAGATTTAATATGAAGGTAACGACCATCGAGGAAGAAAATGACATTACCACCATGAAGTTAGATGACTTGTTCGGTTCTCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTAAAGAAGAAACCATTGCAGAATTCAATGTTCGTGTCCTGAACTTGGCTAATGAATCATTTGCACTTGGAGAAATGATCTCTGACTCTAAGATGGTCCAGAAAGT
GTTAAGATCTCTTCCTGCTAGATTTAATATGAAGGTAACGACCATCGAGGAAGAAAATGACATTACCACCATGAAGTTAGATGACTTGTTCGGTTCTCTTTGA
Protein sequenceShow/hide protein sequence
MAKEETIAEFNVRVLNLANESFALGEMISDSKMVQKVLRSLPARFNMKVTTIEEENDITTMKLDDLFGSL