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IVF0005080 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0005080
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGag-pol polyprotein
Genome locationchr02:5792161..5792451
RNA-Seq ExpressionIVF0005080
SyntenyIVF0005080
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0067204.1 putative mitochondrial protein [Cucumis melo var. makuwa]3.60e-4795.6Show/hide
Query:  MWENHRTIEFKRQPVGQHEREYVTTVEKLNTSNLSAINYIEEVHHLDKIQRELVVIKLQRYLCGELKEVLSAASLLRQFSLPTSMTGISIA
        MWEN RTIEFKRQPVGQHEREYVTT+EKLNTSNLSAINYIEEV+HLDKIQRELVVIKLQR LCGELKEVLSAASLLRQFSLPTSMTGISIA
Subjt:  MWENHRTIEFKRQPVGQHEREYVTTVEKLNTSNLSAINYIEEVHHLDKIQRELVVIKLQRYLCGELKEVLSAASLLRQFSLPTSMTGISIA
TYK18908.1 gag-pol polyprotein [Cucumis melo var. makuwa]3.90e-53100Show/hide
Query:  MWENHRTIEFKRQPVGQHEREYVTTVEKLNTSNLSAINYIEEVHHLDKIQRELVVIKLQRYLCGELKEVLSAASLLRQFSLPTSMTGISIA
        MWENHRTIEFKRQPVGQHEREYVTTVEKLNTSNLSAINYIEEVHHLDKIQRELVVIKLQRYLCGELKEVLSAASLLRQFSLPTSMTGISIA
Subjt:  MWENHRTIEFKRQPVGQHEREYVTTVEKLNTSNLSAINYIEEVHHLDKIQRELVVIKLQRYLCGELKEVLSAASLLRQFSLPTSMTGISIA
TrEMBL top hitse value%identityAlignment
A0A5A7VIM0 Putative mitochondrial protein2.6e-3895.6Show/hide
Query:  MWENHRTIEFKRQPVGQHEREYVTTVEKLNTSNLSAINYIEEVHHLDKIQRELVVIKLQRYLCGELKEVLSAASLLRQFSLPTSMTGISIA
        MWEN RTIEFKRQPVGQHEREYVTT+EKLNTSNLSAINYIEEV+HLDKIQRELVVIKLQR LCGELKEVLSAASLLRQFSLPTSMTGISIA
Subjt:  MWENHRTIEFKRQPVGQHEREYVTTVEKLNTSNLSAINYIEEVHHLDKIQRELVVIKLQRYLCGELKEVLSAASLLRQFSLPTSMTGISIA
A0A5D3D5S1 Gag-pol polyprotein2.0e-41100Show/hide
Query:  MWENHRTIEFKRQPVGQHEREYVTTVEKLNTSNLSAINYIEEVHHLDKIQRELVVIKLQRYLCGELKEVLSAASLLRQFSLPTSMTGISIA
        MWENHRTIEFKRQPVGQHEREYVTTVEKLNTSNLSAINYIEEVHHLDKIQRELVVIKLQRYLCGELKEVLSAASLLRQFSLPTSMTGISIA
Subjt:  MWENHRTIEFKRQPVGQHEREYVTTVEKLNTSNLSAINYIEEVHHLDKIQRELVVIKLQRYLCGELKEVLSAASLLRQFSLPTSMTGISIA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGGAAAATCATCGAACTATCGAATTCAAAAGACAACCAGTTGGCCAGCACGAAAGAGAGTATGTCACTACTGTGGAAAAGCTGAACACATCAAACCTCAGTGCTAT
AAACTACATCGAAGAAGTTCATCACCTCGACAAGATACAAAGAGAACTTGTGGTGATCAAACTCCAAAGATATTTATGTGGAGAGTTAAAGGAAGTGTTAAGTGCTGCAT
CGCTTTTACGACAGTTCTCGCTACCTACTTCGATGACTGGTATTTCGATAGCAGGTGCTCGAGACATATGA
mRNA sequenceShow/hide mRNA sequence
ATGTGGGAAAATCATCGAACTATCGAATTCAAAAGACAACCAGTTGGCCAGCACGAAAGAGAGTATGTCACTACTGTGGAAAAGCTGAACACATCAAACCTCAGTGCTAT
AAACTACATCGAAGAAGTTCATCACCTCGACAAGATACAAAGAGAACTTGTGGTGATCAAACTCCAAAGATATTTATGTGGAGAGTTAAAGGAAGTGTTAAGTGCTGCAT
CGCTTTTACGACAGTTCTCGCTACCTACTTCGATGACTGGTATTTCGATAGCAGGTGCTCGAGACATATGA
Protein sequenceShow/hide protein sequence
MWENHRTIEFKRQPVGQHEREYVTTVEKLNTSNLSAINYIEEVHHLDKIQRELVVIKLQRYLCGELKEVLSAASLLRQFSLPTSMTGISIAGARDI