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IVF0005180 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0005180
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionPMD domain-containing protein
Genome locationchr01:27982569..27983183
RNA-Seq ExpressionIVF0005180
SyntenyIVF0005180
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047478.1 hypothetical protein E6C27_scaffold498G00950 [Cucumis melo var. makuwa]2.77e-11791.1Show/hide
Query:  MVYFTERFLSGVRHLVILSDRNQPREDGLSLIVEKPWAGAFADHWPRLDNNSVLPRLSVEVPLSEGKSAWVLQSSIHNEAPNSGRALTLGQRLIEGQTRW
        MVYFTERFLSGVRHLVILSDRNQPREDGLSLIVEKPWAGAFADHWPRLDNNSVLPRLSVEVPLSEGKSAWVLQSSIHNEAPNSGRALTLGQRLIEGQTRW
Subjt:  MVYFTERFLSGVRHLVILSDRNQPREDGLSLIVEKPWAGAFADHWPRLDNNSVLPRLSVEVPLSEGKSAWVLQSSIHNEAPNSGRALTLGQRLIEGQTRW

Query:  GTVTKVPGEFCFTDCYWEWLELVVGRNTRLLYSTRLYGAVTASLYTYDRNSDVVRAFCEAWCPSTNTLHTMAASYPFLCGTYGPLGVFPLR
        GTVTKVPGEFCFTDCYWEWLELVVGRNTRLLYSTRLYGAVTASLYTYDRNSDVVRAFCEAWCPSTNTLHTMA             G  P++
Subjt:  GTVTKVPGEFCFTDCYWEWLELVVGRNTRLLYSTRLYGAVTASLYTYDRNSDVVRAFCEAWCPSTNTLHTMAASYPFLCGTYGPLGVFPLR

KAA0058006.1 uncharacterized protein E6C27_scaffold274G003110 [Cucumis melo var. makuwa]7.03e-11685.86Show/hide
Query:  MVYFTERFLSGVRHLVILSDRNQPREDGLSLIVEKPWAGAFADHWPRLDNNSVLPRLSVEVPLSEGKSAWVLQSSIHNEAPNSGRALTLGQRLIEGQTRW
        MVYFTERFLSGVRHL+IL ++NQPREDGLSLIVEKPWA AFADHWPRLDNNSVLPRLSVE+PLSEGKSAWVLQSSIHNEAPNSGRALTLGQRLIEGQTRW
Subjt:  MVYFTERFLSGVRHLVILSDRNQPREDGLSLIVEKPWAGAFADHWPRLDNNSVLPRLSVEVPLSEGKSAWVLQSSIHNEAPNSGRALTLGQRLIEGQTRW

Query:  GTVTKVPGEFCFTDCYWEWLELVVGRNTRLLYSTRLYGAVTASLYTYDRNSDVVRAFCEAWCPSTNTLHTMAASYPFLCGTYGPLGVFPLR
        GT+TKVPGEF FTDCYWEWLELVVGRNTRLLYSTRLYG VTASLYTYDRNSDVVR FCEAWCPSTNTLHTMA             G  P++
Subjt:  GTVTKVPGEFCFTDCYWEWLELVVGRNTRLLYSTRLYGAVTASLYTYDRNSDVVRAFCEAWCPSTNTLHTMAASYPFLCGTYGPLGVFPLR

KAA0061098.1 putative mitochondrial protein [Cucumis melo var. makuwa]3.17e-11894.19Show/hide
Query:  MVYFTERFLSGVRHLVILSDRNQPREDGLSLIVEKPWAGAFADHWPRLDNNSVLPRLSVEVPLSEGKSAWVLQSSIHNEAPNSGRALTLGQRLIEGQTRW
        MVYFTERFLSGVRHLVILSDRNQ REDGLSLIVEKPWAG FADHWPRLDNNSVL RLSVE+PLSEGKSAWVLQS IH+EAPNSGRALT GQRLIEGQT W
Subjt:  MVYFTERFLSGVRHLVILSDRNQPREDGLSLIVEKPWAGAFADHWPRLDNNSVLPRLSVEVPLSEGKSAWVLQSSIHNEAPNSGRALTLGQRLIEGQTRW

Query:  GTVTKVPGEFCFTDCYWEWLELVVGRNTRLLYSTRLYGAVTASLYTYDRNSDVVRAFCEAWCPSTNTLHTMA
        GTVTKVPGEFCFTDCYWEWLELVVGRNTRLLYST LYGAVTASLYTYDRN+DVVRAFCEAWCPSTNTLHTMA
Subjt:  GTVTKVPGEFCFTDCYWEWLELVVGRNTRLLYSTRLYGAVTASLYTYDRNSDVVRAFCEAWCPSTNTLHTMA

KAA0065375.1 hypothetical protein E6C27_scaffold17G00370 [Cucumis melo var. makuwa]5.56e-11589.01Show/hide
Query:  MVYFTERFLSGVRHLVILSDRNQPREDGLSLIVEKPWAGAFADHWPRLDNNSVLPRLSVEVPLSEGKSAWVLQSSIHNEAPNSGRALTLGQRLIEGQTRW
        MVYFTERFLSGVRHLVILSDRNQPREDGLSLIVEKPWAGAFADHWPRLDNNSVLPRLSVE+PLSEGKSAW+LQSSIH+EAPNSGRALTLGQRLIEGQTRW
Subjt:  MVYFTERFLSGVRHLVILSDRNQPREDGLSLIVEKPWAGAFADHWPRLDNNSVLPRLSVEVPLSEGKSAWVLQSSIHNEAPNSGRALTLGQRLIEGQTRW

Query:  GTVTKVPGEFCFTDCYWEWLELVVGRNTRLLYSTRLYGAVTASLYTYDRNSDVVRAFCEAWCPSTNTLHTMAASYPFLCGTYGPLGVFPLR
        GTVTKVP EFCFTDCYWEWLELVVGRNTRLLYSTRLYGAVTASLYTYDRNSDVVRAFCEAWCPSTNTLHTMA             G  P++
Subjt:  GTVTKVPGEFCFTDCYWEWLELVVGRNTRLLYSTRLYGAVTASLYTYDRNSDVVRAFCEAWCPSTNTLHTMAASYPFLCGTYGPLGVFPLR

TYK20969.1 hypothetical protein E5676_scaffold18270G00010 [Cucumis melo var. makuwa]1.21e-11788.48Show/hide
Query:  MVYFTERFLSGVRHLVILSDRNQPREDGLSLIVEKPWAGAFADHWPRLDNNSVLPRLSVEVPLSEGKSAWVLQSSIHNEAPNSGRALTLGQRLIEGQTRW
        MVYFTERFLSGVRHLVILSDRNQPREDGLSLIVEKPWAGAFA+HWPRLDNNSVLPRLSVEV LSEGKSAWVLQSSIH EAPNSGRALTLGQRLIEGQTRW
Subjt:  MVYFTERFLSGVRHLVILSDRNQPREDGLSLIVEKPWAGAFADHWPRLDNNSVLPRLSVEVPLSEGKSAWVLQSSIHNEAPNSGRALTLGQRLIEGQTRW

Query:  GTVTKVPGEFCFTDCYWEWLELVVGRNTRLLYSTRLYGAVTASLYTYDRNSDVVRAFCEAWCPSTNTLHTMAASYPFLCGTYGPLGVFPLR
        GTVTKVPGEFCF DCYWEWLELVVGRNTRLLYSTRLYGAVTASLYTYD NSDVVRAFCEAWCPSTNTLHTMA             G  P++
Subjt:  GTVTKVPGEFCFTDCYWEWLELVVGRNTRLLYSTRLYGAVTASLYTYDRNSDVVRAFCEAWCPSTNTLHTMAASYPFLCGTYGPLGVFPLR

TrEMBL top hitse value%identityAlignment
A0A5A7TFC8 PMD domain-containing protein3.8e-9597.67Show/hide
Query:  MVYFTERFLSGVRHLVILSDRNQPREDGLSLIVEKPWAGAFADHWPRLDNNSVLPRLSVEVPLSEGKSAWVLQSSIHNEAPNSGRALTLGQRLIEGQTRW
        MVYFTERFLSGVRHLVILSDRNQPREDGLSLIVEK WAGAFADHWPRLDNNSVLPRLSVEVPLSEGKSAWVLQSSIHNEAPNSGRALTLGQRLIEGQTRW
Subjt:  MVYFTERFLSGVRHLVILSDRNQPREDGLSLIVEKPWAGAFADHWPRLDNNSVLPRLSVEVPLSEGKSAWVLQSSIHNEAPNSGRALTLGQRLIEGQTRW

Query:  GTVTKVPGEFCFTDCYWEWLELVVGRNTRLLYSTRLYGAVTASLYTYDRNSDVVRAFCEAWCPSTNTLHTMA
        GTVTKVPGEFCFTDCYWEWLELVVGRNTRLLYST LY  VTASLYTYDRNSDVVRAFCEAWCPSTNTLHTMA
Subjt:  GTVTKVPGEFCFTDCYWEWLELVVGRNTRLLYSTRLYGAVTASLYTYDRNSDVVRAFCEAWCPSTNTLHTMA

A0A5A7TX42 Uncharacterized protein2.8e-9891.1Show/hide
Query:  MVYFTERFLSGVRHLVILSDRNQPREDGLSLIVEKPWAGAFADHWPRLDNNSVLPRLSVEVPLSEGKSAWVLQSSIHNEAPNSGRALTLGQRLIEGQTRW
        MVYFTERFLSGVRHLVILSDRNQPREDGLSLIVEKPWAGAFADHWPRLDNNSVLPRLSVEVPLSEGKSAWVLQSSIHNEAPNSGRALTLGQRLIEGQTRW
Subjt:  MVYFTERFLSGVRHLVILSDRNQPREDGLSLIVEKPWAGAFADHWPRLDNNSVLPRLSVEVPLSEGKSAWVLQSSIHNEAPNSGRALTLGQRLIEGQTRW

Query:  GTVTKVPGEFCFTDCYWEWLELVVGRNTRLLYSTRLYGAVTASLYTYDRNSDVVRAFCEAWCPSTNTLHTMAASYPFLCGTYGPLGVFPLR
        GTVTKVPGEFCFTDCYWEWLELVVGRNTRLLYSTRLYGAVTASLYTYDRNSDVVRAFCEAWCPSTNTLHTMA             G  P++
Subjt:  GTVTKVPGEFCFTDCYWEWLELVVGRNTRLLYSTRLYGAVTASLYTYDRNSDVVRAFCEAWCPSTNTLHTMAASYPFLCGTYGPLGVFPLR

A0A5A7U8L3 PMD domain-containing protein5.0e-9595.93Show/hide
Query:  MVYFTERFLSGVRHLVILSDRNQPREDGLSLIVEKPWAGAFADHWPRLDNNSVLPRLSVEVPLSEGKSAWVLQSSIHNEAPNSGRALTLGQRLIEGQTRW
        MVYFTERFLSGVRHLVILSDRNQPREDGLSLI+EKPWAGAFADHWPRLDNNSVLPRLSVE+PLSEGKSAW+LQSSIHNEAPNSGRALTLGQRLIEGQTRW
Subjt:  MVYFTERFLSGVRHLVILSDRNQPREDGLSLIVEKPWAGAFADHWPRLDNNSVLPRLSVEVPLSEGKSAWVLQSSIHNEAPNSGRALTLGQRLIEGQTRW

Query:  GTVTKVPGEFCFTDCYWEWLELVVGRNTRLLYSTRLYGAVTASLYTYDRNSDVVRAFCEAWCPSTNTLHTMA
        GT+TKVPGEFCFTDCYWEWLELVVGRNTRLLYSTRLYG VT SLYTYDRNSDVVRAF EAWCPSTNTLHTMA
Subjt:  GTVTKVPGEFCFTDCYWEWLELVVGRNTRLLYSTRLYGAVTASLYTYDRNSDVVRAFCEAWCPSTNTLHTMA

A0A5A7VHW8 PMD domain-containing protein1.6e-9689.01Show/hide
Query:  MVYFTERFLSGVRHLVILSDRNQPREDGLSLIVEKPWAGAFADHWPRLDNNSVLPRLSVEVPLSEGKSAWVLQSSIHNEAPNSGRALTLGQRLIEGQTRW
        MVYFTERFLSGVRHLVILSDRNQPREDGLSLIVEKPWAGAFADHWPRLDNNSVLPRLSVE+PLSEGKSAW+LQSSIH+EAPNSGRALTLGQRLIEGQTRW
Subjt:  MVYFTERFLSGVRHLVILSDRNQPREDGLSLIVEKPWAGAFADHWPRLDNNSVLPRLSVEVPLSEGKSAWVLQSSIHNEAPNSGRALTLGQRLIEGQTRW

Query:  GTVTKVPGEFCFTDCYWEWLELVVGRNTRLLYSTRLYGAVTASLYTYDRNSDVVRAFCEAWCPSTNTLHTMAASYPFLCGTYGPLGVFPLR
        GTVTKVP EFCFTDCYWEWLELVVGRNTRLLYSTRLYGAVTASLYTYDRNSDVVRAFCEAWCPSTNTLHTMA             G  P++
Subjt:  GTVTKVPGEFCFTDCYWEWLELVVGRNTRLLYSTRLYGAVTASLYTYDRNSDVVRAFCEAWCPSTNTLHTMAASYPFLCGTYGPLGVFPLR

A0A5D3D7V4 PMD domain-containing protein3.8e-9597.67Show/hide
Query:  MVYFTERFLSGVRHLVILSDRNQPREDGLSLIVEKPWAGAFADHWPRLDNNSVLPRLSVEVPLSEGKSAWVLQSSIHNEAPNSGRALTLGQRLIEGQTRW
        MVYFTERFLSGVRHLVILSDRNQPREDGLSLIVEK WAGAFADHWPRLDNNSVLPRLSVEVPLSEGKSAWVLQSSIHNEAPNSGRALTLGQRLIEGQTRW
Subjt:  MVYFTERFLSGVRHLVILSDRNQPREDGLSLIVEKPWAGAFADHWPRLDNNSVLPRLSVEVPLSEGKSAWVLQSSIHNEAPNSGRALTLGQRLIEGQTRW

Query:  GTVTKVPGEFCFTDCYWEWLELVVGRNTRLLYSTRLYGAVTASLYTYDRNSDVVRAFCEAWCPSTNTLHTMA
        GTVTKVPGEFCFTDCYWEWLELVVGRNTRLLYST LY  VTASLYTYDRNSDVVRAFCEAWCPSTNTLHTMA
Subjt:  GTVTKVPGEFCFTDCYWEWLELVVGRNTRLLYSTRLYGAVTASLYTYDRNSDVVRAFCEAWCPSTNTLHTMA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTACTTCACGGAACGATTCTTGTCTGGAGTTCGACATCTCGTAATACTTTCTGATAGAAATCAACCCAGAGAAGATGGACTTAGTCTCATTGTGGAGAAGCCGTG
GGCTGGCGCTTTTGCAGATCATTGGCCACGCTTAGACAACAACTCAGTTCTTCCCAGATTATCCGTGGAGGTACCCTTGTCCGAGGGAAAAAGCGCATGGGTCTTGCAAT
CTTCTATCCACAATGAGGCTCCTAATTCTGGCAGAGCTCTCACTCTTGGACAACGTTTAATTGAAGGCCAAACACGTTGGGGTACTGTGACCAAGGTCCCTGGAGAGTTT
TGCTTTACTGACTGTTATTGGGAGTGGTTGGAGCTTGTAGTTGGTCGAAATACACGACTTCTTTACAGTACTCGTTTATATGGCGCCGTAACAGCTTCTTTATACACTTA
TGATCGCAACAGTGATGTTGTTCGAGCATTTTGTGAAGCATGGTGTCCTTCGACTAATACTCTTCATACTATGGCGGCGAGTTATCCATTTCTTTGTGGGACTTATGGTC
CTTTGGGGGTCTTCCCATTAAGGGAGATTTCTACGAGGAAAGGATCCCTTCTTTTAAAGAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTTACTTCACGGAACGATTCTTGTCTGGAGTTCGACATCTCGTAATACTTTCTGATAGAAATCAACCCAGAGAAGATGGACTTAGTCTCATTGTGGAGAAGCCGTG
GGCTGGCGCTTTTGCAGATCATTGGCCACGCTTAGACAACAACTCAGTTCTTCCCAGATTATCCGTGGAGGTACCCTTGTCCGAGGGAAAAAGCGCATGGGTCTTGCAAT
CTTCTATCCACAATGAGGCTCCTAATTCTGGCAGAGCTCTCACTCTTGGACAACGTTTAATTGAAGGCCAAACACGTTGGGGTACTGTGACCAAGGTCCCTGGAGAGTTT
TGCTTTACTGACTGTTATTGGGAGTGGTTGGAGCTTGTAGTTGGTCGAAATACACGACTTCTTTACAGTACTCGTTTATATGGCGCCGTAACAGCTTCTTTATACACTTA
TGATCGCAACAGTGATGTTGTTCGAGCATTTTGTGAAGCATGGTGTCCTTCGACTAATACTCTTCATACTATGGCGGCGAGTTATCCATTTCTTTGTGGGACTTATGGTC
CTTTGGGGGTCTTCCCATTAAGGGAGATTTCTACGAGGAAAGGATCCCTTCTTTTAAAGAATTGA
Protein sequenceShow/hide protein sequence
MVYFTERFLSGVRHLVILSDRNQPREDGLSLIVEKPWAGAFADHWPRLDNNSVLPRLSVEVPLSEGKSAWVLQSSIHNEAPNSGRALTLGQRLIEGQTRWGTVTKVPGEF
CFTDCYWEWLELVVGRNTRLLYSTRLYGAVTASLYTYDRNSDVVRAFCEAWCPSTNTLHTMAASYPFLCGTYGPLGVFPLREISTRKGSLLLKN