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IVF0005209 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0005209
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionTy3/gypsy retrotransposon protein
Genome locationchr06:20896428..20896798
RNA-Seq ExpressionIVF0005209
SyntenyIVF0005209
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0098869 - cellular oxidant detoxification (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004601 - peroxidase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036997.1 gypsy/ty3 element polyprotein [Cucumis melo var. makuwa]5.34e-4364.23Show/hide
Query:  AVQGRGMCKSVTIGLPVITIMEDFLPLELRNLDIVLGMQWLRKQGAMT-------------ETKVILRGDPSLTRMEVSLEMLMKTWQPKDQGFLIDFRA
        AVQGRG+CK +T+GLPVI+I+EDFLPLEL N+D+VLGMQWL+KQGAMT             +TKVIL+GDPSLTRME+SL++L+KTWQP DQGFL++FRA
Subjt:  AVQGRGMCKSVTIGLPVITIMEDFLPLELRNLDIVLGMQWLRKQGAMT-------------ETKVILRGDPSLTRMEVSLEMLMKTWQPKDQGFLIDFRA

Query:  MGISKRDRHIRV-ESVEEFLTQF
        MGI K DR + V ++VEE+ ++F
Subjt:  MGISKRDRHIRV-ESVEEFLTQF

KAA0049174.1 gypsy/ty3 element polyprotein [Cucumis melo var. makuwa]1.83e-4365.04Show/hide
Query:  AVQGRGMCKSVTIGLPVITIMEDFLPLELRNLDIVLGMQWLRKQGAMT-------------ETKVILRGDPSLTRMEVSLEMLMKTWQPKDQGFLIDFRA
        AVQGRG+CK +T+GLPVI+I+EDFLPLEL N+D+VLGMQWL+KQGAMT             +TKVIL+GDPSLTRME+SL++L+KTWQP DQGFL++FRA
Subjt:  AVQGRGMCKSVTIGLPVITIMEDFLPLELRNLDIVLGMQWLRKQGAMT-------------ETKVILRGDPSLTRMEVSLEMLMKTWQPKDQGFLIDFRA

Query:  MGISKRDRHIRV-ESVEEFLTQF
        MGI K DR I V ++VEE+ ++F
Subjt:  MGISKRDRHIRV-ESVEEFLTQF

KAA0052160.1 peroxidase 64 [Cucumis melo var. makuwa]1.55e-4365.32Show/hide
Query:  AVQGRGMCKSVTIGLPVITIMEDFLPLELRNLDIVLGMQWLRKQGAMT-------------ETKVILRGDPSLTRMEVSLEMLMKTWQPKDQGFLIDFRA
        AVQGRGMCK +T+GLPVITI+EDFLPLEL NLD+VLGMQWL+KQGAMT             +TKVIL+GDPSLTRME+SL++L+KTWQ  DQ FL++FRA
Subjt:  AVQGRGMCKSVTIGLPVITIMEDFLPLELRNLDIVLGMQWLRKQGAMT-------------ETKVILRGDPSLTRMEVSLEMLMKTWQPKDQGFLIDFRA

Query:  MGISKRDRHIRV-ESVEEFLTQFE
        MGI K DR + V +SVE++  +FE
Subjt:  MGISKRDRHIRV-ESVEEFLTQFE

TYJ98541.1 pleiotropic drug resistance protein 1-like [Cucumis melo var. makuwa]1.34e-4564.52Show/hide
Query:  AVQGRGMCKSVTIGLPVITIMEDFLPLELRNLDIVLGMQWLRKQGAMT-------------ETKVILRGDPSLTRMEVSLEMLMKTWQPKDQGFLIDFRA
        AVQGRGMCK +T+GLPVIT++EDFLPL+L N+D+VLGMQWL+KQGAMT             +TKVIL+GDPSLTRME+SL++L+KTWQP DQGFL++FRA
Subjt:  AVQGRGMCKSVTIGLPVITIMEDFLPLELRNLDIVLGMQWLRKQGAMT-------------ETKVILRGDPSLTRMEVSLEMLMKTWQPKDQGFLIDFRA

Query:  MGISKRDRHIRV-ESVEEFLTQFE
        MGI K DR + V +SVE++  +FE
Subjt:  MGISKRDRHIRV-ESVEEFLTQFE

TYK17386.1 gypsy/ty3 element polyprotein [Cucumis melo var. makuwa]2.44e-4365.04Show/hide
Query:  AVQGRGMCKSVTIGLPVITIMEDFLPLELRNLDIVLGMQWLRKQGAMT-------------ETKVILRGDPSLTRMEVSLEMLMKTWQPKDQGFLIDFRA
        AVQGRG+CK +T+GLPVI+I+EDFLPLEL N+D+VLGMQWL+KQGAMT             +TKVIL+GDPSLTRME+SL++L+KTWQP DQGFL++FRA
Subjt:  AVQGRGMCKSVTIGLPVITIMEDFLPLELRNLDIVLGMQWLRKQGAMT-------------ETKVILRGDPSLTRMEVSLEMLMKTWQPKDQGFLIDFRA

Query:  MGISKRDRHIRV-ESVEEFLTQF
        MGI K DR I V ++VEE+ ++F
Subjt:  MGISKRDRHIRV-ESVEEFLTQF

TrEMBL top hitse value%identityAlignment
A0A5A7SR72 Ty3/gypsy retrotransposon protein4.9e-3664.23Show/hide
Query:  AVQGRGMCKSVTIGLPVITIMEDFLPLELRNLDIVLGMQWLRKQGAMT-------------ETKVILRGDPSLTRMEVSLEMLMKTWQPKDQGFLIDFRA
        AVQGRGMCK +T+GLPVI+I+EDFLPLEL N+D+VLGMQWL+KQGAMT             +TKVIL+GDPSLTRME+SL++L+KTWQP DQGFL++FRA
Subjt:  AVQGRGMCKSVTIGLPVITIMEDFLPLELRNLDIVLGMQWLRKQGAMT-------------ETKVILRGDPSLTRMEVSLEMLMKTWQPKDQGFLIDFRA

Query:  MGISKRDRHIRV-ESVEEFLTQF
        MGI K DR + V ++VE++ ++F
Subjt:  MGISKRDRHIRV-ESVEEFLTQF

A0A5A7U1I8 Gypsy/ty3 element polyprotein3.7e-3665.04Show/hide
Query:  AVQGRGMCKSVTIGLPVITIMEDFLPLELRNLDIVLGMQWLRKQGAMT-------------ETKVILRGDPSLTRMEVSLEMLMKTWQPKDQGFLIDFRA
        AVQGRG+CK +T+GLPVI+I+EDFLPLEL N+D+VLGMQWL+KQGAMT             +TKVIL+GDPSLTRME+SL++L+KTWQP DQGFL++FRA
Subjt:  AVQGRGMCKSVTIGLPVITIMEDFLPLELRNLDIVLGMQWLRKQGAMT-------------ETKVILRGDPSLTRMEVSLEMLMKTWQPKDQGFLIDFRA

Query:  MGISKRDRHIRV-ESVEEFLTQF
        MGI K DR I V ++VEE+ ++F
Subjt:  MGISKRDRHIRV-ESVEEFLTQF

A0A5A7UPE1 Ty3/gypsy retrotransposon protein4.9e-3664.23Show/hide
Query:  AVQGRGMCKSVTIGLPVITIMEDFLPLELRNLDIVLGMQWLRKQGAMT-------------ETKVILRGDPSLTRMEVSLEMLMKTWQPKDQGFLIDFRA
        AVQGRGMCK +T+GLPVI+I+EDFLPLEL N+D+VLGMQWL+KQGAMT             +TKVIL+GDPSLTRME+SL++L+KTWQP DQGFL++FRA
Subjt:  AVQGRGMCKSVTIGLPVITIMEDFLPLELRNLDIVLGMQWLRKQGAMT-------------ETKVILRGDPSLTRMEVSLEMLMKTWQPKDQGFLIDFRA

Query:  MGISKRDRHIRV-ESVEEFLTQF
        MGI K DR + V ++VE++ ++F
Subjt:  MGISKRDRHIRV-ESVEEFLTQF

A0A5D3BIM8 Pleiotropic drug resistance protein 1-like2.2e-3664.52Show/hide
Query:  AVQGRGMCKSVTIGLPVITIMEDFLPLELRNLDIVLGMQWLRKQGAMT-------------ETKVILRGDPSLTRMEVSLEMLMKTWQPKDQGFLIDFRA
        AVQGRGMCK +T+GLPVIT++EDFLPL+L N+D+VLGMQWL+KQGAMT             +TKVIL+GDPSLTRME+SL++L+KTWQP DQGFL++FRA
Subjt:  AVQGRGMCKSVTIGLPVITIMEDFLPLELRNLDIVLGMQWLRKQGAMT-------------ETKVILRGDPSLTRMEVSLEMLMKTWQPKDQGFLIDFRA

Query:  MGISKRDRHIRV-ESVEEFLTQFE
        MGI K DR + V +SVE++  +FE
Subjt:  MGISKRDRHIRV-ESVEEFLTQFE

A0A5D3D378 Gypsy/ty3 element polyprotein3.7e-3665.04Show/hide
Query:  AVQGRGMCKSVTIGLPVITIMEDFLPLELRNLDIVLGMQWLRKQGAMT-------------ETKVILRGDPSLTRMEVSLEMLMKTWQPKDQGFLIDFRA
        AVQGRG+CK +T+GLPVI+I+EDFLPLEL N+D+VLGMQWL+KQGAMT             +TKVIL+GDPSLTRME+SL++L+KTWQP DQGFL++FRA
Subjt:  AVQGRGMCKSVTIGLPVITIMEDFLPLELRNLDIVLGMQWLRKQGAMT-------------ETKVILRGDPSLTRMEVSLEMLMKTWQPKDQGFLIDFRA

Query:  MGISKRDRHIRV-ESVEEFLTQF
        MGI K DR I V ++VEE+ ++F
Subjt:  MGISKRDRHIRV-ESVEEFLTQF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGTTCAAGGAAGAGGGATGTGTAAAAGCGTCACAATAGGGTTACCGGTTATAACCATAATGGAGGACTTTTTACCATTAGAATTGAGGAATCTGGATATAGTGTT
GGGAATGCAGTGGTTACGTAAACAAGGGGCTATGACAGAGACAAAGGTAATATTGAGGGGAGATCCCTCCTTAACTAGAATGGAAGTGTCCTTGGAAATGTTAATGAAGA
CTTGGCAACCGAAAGATCAAGGATTTCTGATCGATTTCAGGGCCATGGGCATATCAAAAAGAGACCGTCATATAAGGGTGGAGTCTGTGGAAGAATTTCTAACCCAATTC
GAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGTTCAAGGAAGAGGGATGTGTAAAAGCGTCACAATAGGGTTACCGGTTATAACCATAATGGAGGACTTTTTACCATTAGAATTGAGGAATCTGGATATAGTGTT
GGGAATGCAGTGGTTACGTAAACAAGGGGCTATGACAGAGACAAAGGTAATATTGAGGGGAGATCCCTCCTTAACTAGAATGGAAGTGTCCTTGGAAATGTTAATGAAGA
CTTGGCAACCGAAAGATCAAGGATTTCTGATCGATTTCAGGGCCATGGGCATATCAAAAAGAGACCGTCATATAAGGGTGGAGTCTGTGGAAGAATTTCTAACCCAATTC
GAGTAA
Protein sequenceShow/hide protein sequence
MAVQGRGMCKSVTIGLPVITIMEDFLPLELRNLDIVLGMQWLRKQGAMTETKVILRGDPSLTRMEVSLEMLMKTWQPKDQGFLIDFRAMGISKRDRHIRVESVEEFLTQF
E