; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0005211 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0005211
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGag-pol polyprotein
Genome locationchr12:14896910..14897131
RNA-Seq ExpressionIVF0005211
SyntenyIVF0005211
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054378.1 Receptor-like protein 12 [Cucumis melo var. makuwa]8.37e-47100Show/hide
Query:  MDLREGSSTTRPPVLDGANYGYWKARMVAFLKSLDLRCWRVVMAGWEYPTETSEDGIITPKSELKWSRAEDEL
        MDLREGSSTTRPPVLDGANYGYWKARMVAFLKSLDLRCWRVVMAGWEYPTETSEDGIITPKSELKWSRAEDEL
Subjt:  MDLREGSSTTRPPVLDGANYGYWKARMVAFLKSLDLRCWRVVMAGWEYPTETSEDGIITPKSELKWSRAEDEL

KAA0058507.1 Receptor-like protein 12 [Cucumis melo var. makuwa]1.90e-2764.71Show/hide
Query:  EGSSTTRPPVLDGANYGYWKARMVAFLKSLDLRCWRVVMAGWEYPTETSEDGIITPKSELKWSRAEDE
        EG+STTRPP+LDG NYGYWK+RM AF  SLD+RCWR +++GWEYPTE  E   +T KSELKW+  E++
Subjt:  EGSSTTRPPVLDGANYGYWKARMVAFLKSLDLRCWRVVMAGWEYPTETSEDGIITPKSELKWSRAEDE

KAA0065350.1 gag-pol polyprotein [Cucumis melo var. makuwa]1.82e-2864.29Show/hide
Query:  LREGSSTTRPPVLDGANYGYWKARMVAFLKSLDLRCWRVVMAGWEYPTETSEDGIITPKSELKWSRAEDE
        +REG+STT+PP+LDG NYGYWK  M AFL SLD+RCWR +++GWE+PTE  E G +T KSELKW+  ED+
Subjt:  LREGSSTTRPPVLDGANYGYWKARMVAFLKSLDLRCWRVVMAGWEYPTETSEDGIITPKSELKWSRAEDE

TYK11147.1 gag-pol polyprotein [Cucumis melo var. makuwa]2.33e-2968.06Show/hide
Query:  DLREGSSTTRPPVLDGANYGYWKARMVAFLKSLDLRCWRVVMAGWEYPTETSEDGIITPKSELKWSRAEDEL
        +LREG ST RPP+LDGANY +WKA+M+AF+KSL+L C R +MAGWE PTET++ G++TPK ELKWS+AEDE+
Subjt:  DLREGSSTTRPPVLDGANYGYWKARMVAFLKSLDLRCWRVVMAGWEYPTETSEDGIITPKSELKWSRAEDEL

TYK26904.1 gag-proteinase polyprotein [Cucumis melo var. makuwa]1.17e-2765.22Show/hide
Query:  EGSSTTRPPVLDGANYGYWKARMVAFLKSLDLRCWRVVMAGWEYPTETSEDGIITPKSELKWSRAEDEL
        EG +T +PP+LDG NYGYWKARM+ FLKSLDL CWRVVM  W+ P +TSE+G++T K+ELKW + EDE+
Subjt:  EGSSTTRPPVLDGANYGYWKARMVAFLKSLDLRCWRVVMAGWEYPTETSEDGIITPKSELKWSRAEDEL

TrEMBL top hitse value%identityAlignment
A0A5A7TNG1 Gag-pol polyprotein2.6e-2268.06Show/hide
Query:  DLREGSSTTRPPVLDGANYGYWKARMVAFLKSLDLRCWRVVMAGWEYPTETSEDGIITPKSELKWSRAEDEL
        +LREG ST RPP+LDGANY +WKA+M+AF+KSL+L C R VMAGWE PTET++ G++TPK ELKWS+A+DE+
Subjt:  DLREGSSTTRPPVLDGANYGYWKARMVAFLKSLDLRCWRVVMAGWEYPTETSEDGIITPKSELKWSRAEDEL

A0A5A7VDT5 Gag-pol polyprotein1.7e-2164.29Show/hide
Query:  LREGSSTTRPPVLDGANYGYWKARMVAFLKSLDLRCWRVVMAGWEYPTETSEDGIITPKSELKWSRAEDE
        +REG+STT+PP+LDG NYGYWK  M AFL SLD+RCWR +++GWE+PTE  E G +T KSELKW+  ED+
Subjt:  LREGSSTTRPPVLDGANYGYWKARMVAFLKSLDLRCWRVVMAGWEYPTETSEDGIITPKSELKWSRAEDE

A0A5D3CGP4 Gag-pol polyprotein2.0e-2268.06Show/hide
Query:  DLREGSSTTRPPVLDGANYGYWKARMVAFLKSLDLRCWRVVMAGWEYPTETSEDGIITPKSELKWSRAEDEL
        +LREG ST RPP+LDGANY +WKA+M+AF+KSL+L C R +MAGWE PTET++ G++TPK ELKWS+AEDE+
Subjt:  DLREGSSTTRPPVLDGANYGYWKARMVAFLKSLDLRCWRVVMAGWEYPTETSEDGIITPKSELKWSRAEDEL

A0A5D3CLH9 Receptor-like protein 125.5e-36100Show/hide
Query:  MDLREGSSTTRPPVLDGANYGYWKARMVAFLKSLDLRCWRVVMAGWEYPTETSEDGIITPKSELKWSRAEDEL
        MDLREGSSTTRPPVLDGANYGYWKARMVAFLKSLDLRCWRVVMAGWEYPTETSEDGIITPKSELKWSRAEDEL
Subjt:  MDLREGSSTTRPPVLDGANYGYWKARMVAFLKSLDLRCWRVVMAGWEYPTETSEDGIITPKSELKWSRAEDEL

A0A5D3DTR6 Gag-proteinase polyprotein1.3e-2165.22Show/hide
Query:  EGSSTTRPPVLDGANYGYWKARMVAFLKSLDLRCWRVVMAGWEYPTETSEDGIITPKSELKWSRAEDEL
        EG +T +PP+LDG NYGYWKARM+ FLKSLDL CWRVVM  W+ P +TSE+G++T K+ELKW + EDE+
Subjt:  EGSSTTRPPVLDGANYGYWKARMVAFLKSLDLRCWRVVMAGWEYPTETSEDGIITPKSELKWSRAEDEL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTTGCGTGAAGGAAGTTCAACAACTAGACCTCCTGTACTTGATGGAGCAAACTATGGATACTGGAAAGCACGAATGGTGGCCTTCTTAAAATCTCTCGACTTAAG
ATGTTGGAGAGTTGTGATGGCTGGATGGGAGTACCCTACTGAAACAAGTGAAGATGGTATAATCACTCCCAAGTCTGAACTAAAATGGTCGAGAGCTGAAGATGAACTGT
AA
mRNA sequenceShow/hide mRNA sequence
ATGGATTTGCGTGAAGGAAGTTCAACAACTAGACCTCCTGTACTTGATGGAGCAAACTATGGATACTGGAAAGCACGAATGGTGGCCTTCTTAAAATCTCTCGACTTAAG
ATGTTGGAGAGTTGTGATGGCTGGATGGGAGTACCCTACTGAAACAAGTGAAGATGGTATAATCACTCCCAAGTCTGAACTAAAATGGTCGAGAGCTGAAGATGAACTGT
AA
Protein sequenceShow/hide protein sequence
MDLREGSSTTRPPVLDGANYGYWKARMVAFLKSLDLRCWRVVMAGWEYPTETSEDGIITPKSELKWSRAEDEL