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IVF0005216 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0005216
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUnknown protein
Genome locationchr11:2542530..2542919
RNA-Seq ExpressionIVF0005216
SyntenyIVF0005216
Gene Ontology termsNA
InterPro domainsIPR015300 - DNA-binding pseudobarrel domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8651895.1 hypothetical protein Csa_006112 [Cucumis sativus]1.12e-5771.76Show/hide
Query:  MEQLE--YTITETLDGSRKLGLKLDPEEMLSESQFLLNCFKDLDGKTKITMFDDVLEKSFKATIERKSASNQFVIEWGKDFVKKINYKNGDEIKLRWEPQ
        MEQ +  ++ITETLDGS++LGLKLD  EML ES FLLN F +  GK KITMFD V EKSFKAT+ERKSASNQF+I W KDFVK INYK+GDEI L WEPQ
Subjt:  MEQLE--YTITETLDGSRKLGLKLDPEEMLSESQFLLNCFKDLDGKTKITMFDDVLEKSFKATIERKSASNQFVIEWGKDFVKKINYKNGDEIKLRWEPQ

Query:  KESLCFKIIKCSALKTYPQMSSQYRSYNYGS
         +SLCF+I++CSAL+TYPQMS QY SYNY S
Subjt:  KESLCFKIIKCSALKTYPQMSSQYRSYNYGS

KAE8651896.1 hypothetical protein Csa_006487 [Cucumis sativus]1.17e-5975.81Show/hide
Query:  YTITETLDGSRKLGLKLDPEEMLSESQFLLNCFKDLDGKTKITMFDDVLEKSFKATIERKSASNQFVIEWGKDFVKKINYKNGDEIKLRWEPQKESLCFK
        ++ITETLDGS++LGLKLD  EML ES FLLN F +  GK KITMFD V EKSFKAT+ERKSASNQF+I W KDFVK INYKNGDEI L WEPQ +SLCF+
Subjt:  YTITETLDGSRKLGLKLDPEEMLSESQFLLNCFKDLDGKTKITMFDDVLEKSFKATIERKSASNQFVIEWGKDFVKKINYKNGDEIKLRWEPQKESLCFK

Query:  IIKCSALKTYPQMSSQYRSYNYGS
        I+KCSAL+TYPQMS QYRSYNY S
Subjt:  IIKCSALKTYPQMSSQYRSYNYGS

XP_015084380.1 B3 domain-containing protein At2g33720-like [Solanum pennellii]5.83e-0441.27Show/hide
Query:  ITMFDDVLEKSFKATIERKSASNQF--VIEWGKDFVKKINYKNGDEIKLRWEPQKESLCFKII
        +T+FD   + S   T+ +K A+N F  V  W KDFVK+ N K  DEI +RWE      CF+++
Subjt:  ITMFDDVLEKSFKATIERKSASNQF--VIEWGKDFVKKINYKNGDEIKLRWEPQKESLCFKII

TrEMBL top hitse value%identityAlignment
A0A0A0LD04 Uncharacterized protein1.3e-4371.76Show/hide
Query:  MEQLE--YTITETLDGSRKLGLKLDPEEMLSESQFLLNCFKDLDGKTKITMFDDVLEKSFKATIERKSASNQFVIEWGKDFVKKINYKNGDEIKLRWEPQ
        MEQ +  ++ITETLDGS++LGLKLD  EML ES FLLN F +  GK KITMFD V EKSFKAT+ERKSASNQF+I W KDFVK INYK+GDEI L WEPQ
Subjt:  MEQLE--YTITETLDGSRKLGLKLDPEEMLSESQFLLNCFKDLDGKTKITMFDDVLEKSFKATIERKSASNQFVIEWGKDFVKKINYKNGDEIKLRWEPQ

Query:  KESLCFKIIKCSALKTYPQMSSQYRSYNYGS
         +SLCF+I++CSAL+TYPQMS QY SYNY S
Subjt:  KESLCFKIIKCSALKTYPQMSSQYRSYNYGS

A0A0A0LJ50 Uncharacterized protein2.3e-4575.81Show/hide
Query:  YTITETLDGSRKLGLKLDPEEMLSESQFLLNCFKDLDGKTKITMFDDVLEKSFKATIERKSASNQFVIEWGKDFVKKINYKNGDEIKLRWEPQKESLCFK
        ++ITETLDGS++LGLKLD  EML ES FLLN F +  GK KITMFD V EKSFKAT+ERKSASNQF+I W KDFVK INYKNGDEI L WEPQ +SLCF+
Subjt:  YTITETLDGSRKLGLKLDPEEMLSESQFLLNCFKDLDGKTKITMFDDVLEKSFKATIERKSASNQFVIEWGKDFVKKINYKNGDEIKLRWEPQKESLCFK

Query:  IIKCSALKTYPQMSSQYRSYNYGS
        I+KCSAL+TYPQMS QYRSYNY S
Subjt:  IIKCSALKTYPQMSSQYRSYNYGS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAACAGCTGGAGTATACGATCACAGAGACACTAGATGGAAGTAGAAAATTAGGTCTAAAGTTGGATCCTGAAGAAATGTTATCTGAATCACAATTTCTTCTTAATTG
TTTTAAAGACCTCGATGGGAAAACAAAAATCACCATGTTTGATGATGTTTTAGAAAAAAGTTTTAAAGCGACCATAGAAAGGAAAAGCGCTTCTAACCAATTTGTTATTG
AGTGGGGTAAAGACTTCGTCAAAAAAATAAACTATAAGAATGGAGATGAAATTAAGTTGCGTTGGGAACCTCAGAAGGAAAGTCTATGTTTTAAGATTATAAAGTGTTCA
GCTCTTAAAACTTATCCACAAATGTCTTCTCAATATCGTTCGTATAATTATGGTTCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAACAGCTGGAGTATACGATCACAGAGACACTAGATGGAAGTAGAAAATTAGGTCTAAAGTTGGATCCTGAAGAAATGTTATCTGAATCACAATTTCTTCTTAATTG
TTTTAAAGACCTCGATGGGAAAACAAAAATCACCATGTTTGATGATGTTTTAGAAAAAAGTTTTAAAGCGACCATAGAAAGGAAAAGCGCTTCTAACCAATTTGTTATTG
AGTGGGGTAAAGACTTCGTCAAAAAAATAAACTATAAGAATGGAGATGAAATTAAGTTGCGTTGGGAACCTCAGAAGGAAAGTCTATGTTTTAAGATTATAAAGTGTTCA
GCTCTTAAAACTTATCCACAAATGTCTTCTCAATATCGTTCGTATAATTATGGTTCCTAG
Protein sequenceShow/hide protein sequence
MEQLEYTITETLDGSRKLGLKLDPEEMLSESQFLLNCFKDLDGKTKITMFDDVLEKSFKATIERKSASNQFVIEWGKDFVKKINYKNGDEIKLRWEPQKESLCFKIIKCS
ALKTYPQMSSQYRSYNYGS