; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0005219 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0005219
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRas-related protein RABA5b-like
Genome locationchr07:22738334..22738690
RNA-Seq ExpressionIVF0005219
SyntenyIVF0005219
Gene Ontology termsGO:0003924 - GTPase activity (molecular function)
GO:0005525 - GTP binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044545.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]4.50e-2698.18Show/hide
Query:  MFNLVLNDNSVIGKSKFLLPFRWNEIDDVKYKASIGVEFQIQVLTVNGKEVKSLI
        MFNLVLNDNSVIGKSKFLLPFRWNEIDDVKYKASIGVEFQIQVLTVNGKEVKSL+
Subjt:  MFNLVLNDNSVIGKSKFLLPFRWNEIDDVKYKASIGVEFQIQVLTVNGKEVKSLI

KGN53014.1 hypothetical protein Csa_015426 [Cucumis sativus]1.26e-3880.25Show/hide
Query:  MFNLVLNDNSVIGKSKFLLPFRWNEIDDVKYKASIGVEFQIQVLTVNGKEVKSLIFQGRGFLDDGFWWRNPKQEKRPFNNP
        MFNLVL DNSV+GKS  LLPF  NEID V YKASIGVEFQIQVL +NGKEVKSLIF+ RGFLDDGFWWRNP+  K PFNNP
Subjt:  MFNLVLNDNSVIGKSKFLLPFRWNEIDDVKYKASIGVEFQIQVLTVNGKEVKSLIFQGRGFLDDGFWWRNPKQEKRPFNNP

MBA0669252.1 hypothetical protein [Gossypium klotzschianum]4.98e-0746.67Show/hide
Query:  MFNLVLNDNSVIGKSKFLLPFRWNEIDDVKYKASIGVEFQIQVLTVNGKEVKSLIFQGRG
        +F +VL  +S +GKS  L  F  NE D+   KA+IGVEFQ QV+ ++GKE+K+ I+   G
Subjt:  MFNLVLNDNSVIGKSKFLLPFRWNEIDDVKYKASIGVEFQIQVLTVNGKEVKSLIFQGRG

MBA0844539.1 hypothetical protein [Gossypium armourianum]5.45e-0748.33Show/hide
Query:  MFNLVLNDNSVIGKSKFLLPFRWNEIDDVKYKASIGVEFQIQVLTVNGKEVKSLIFQGRG
        +F +VL  +S +GKS  L  F  NE D+   KA+IGVEFQ QV+ +NGKE+K+ I+   G
Subjt:  MFNLVLNDNSVIGKSKFLLPFRWNEIDDVKYKASIGVEFQIQVLTVNGKEVKSLIFQGRG

TYK17038.1 ras-related protein RABA5b-like [Cucumis melo var. makuwa]4.87e-3098.18Show/hide
Query:  MFNLVLNDNSVIGKSKFLLPFRWNEIDDVKYKASIGVEFQIQVLTVNGKEVKSLI
        MFNLVLNDNSVIGKSKFLLPFRWNEIDDVKYKASIGVEFQIQVLTVNGKEVKSL+
Subjt:  MFNLVLNDNSVIGKSKFLLPFRWNEIDDVKYKASIGVEFQIQVLTVNGKEVKSLI

TrEMBL top hitse value%identityAlignment
A0A0A0KVZ8 Uncharacterized protein3.6e-2880.25Show/hide
Query:  MFNLVLNDNSVIGKSKFLLPFRWNEIDDVKYKASIGVEFQIQVLTVNGKEVKSLIFQGRGFLDDGFWWRNPKQEKRPFNNP
        MFNLVL DNSV+GKS  LLPF  NEI DV YKASIGVEFQIQVL +NGKEVKSLIF+ RGFLDDGFWWRNP+  K PFNNP
Subjt:  MFNLVLNDNSVIGKSKFLLPFRWNEIDDVKYKASIGVEFQIQVLTVNGKEVKSLIFQGRGFLDDGFWWRNPKQEKRPFNNP

A0A2P5YWG7 Uncharacterized protein1.2e-0446.67Show/hide
Query:  MFNLVLNDNSVIGKSKFLLPFRWNEIDDVKYKASIGVEFQIQVLTVNGKEVKSLIFQGRG
        +F +VL   S +GKS  L  F  NE D+   KA+IGVEFQ QV+ ++GKE+K+ I+   G
Subjt:  MFNLVLNDNSVIGKSKFLLPFRWNEIDDVKYKASIGVEFQIQVLTVNGKEVKSLIFQGRG

A0A5A7TT53 Pentatricopeptide repeat-containing protein1.5e-2198.18Show/hide
Query:  MFNLVLNDNSVIGKSKFLLPFRWNEIDDVKYKASIGVEFQIQVLTVNGKEVKSLI
        MFNLVLNDNSVIGKSKFLLPFRWNEIDDVKYKASIGVEFQIQVLTVNGKEVKSL+
Subjt:  MFNLVLNDNSVIGKSKFLLPFRWNEIDDVKYKASIGVEFQIQVLTVNGKEVKSLI

A0A5D3D0L2 Ras-related protein RABA5b-like1.5e-2198.18Show/hide
Query:  MFNLVLNDNSVIGKSKFLLPFRWNEIDDVKYKASIGVEFQIQVLTVNGKEVKSLI
        MFNLVLNDNSVIGKSKFLLPFRWNEIDDVKYKASIGVEFQIQVLTVNGKEVKSL+
Subjt:  MFNLVLNDNSVIGKSKFLLPFRWNEIDDVKYKASIGVEFQIQVLTVNGKEVKSLI

A0A7J9KE47 Uncharacterized protein5.5e-0548.33Show/hide
Query:  MFNLVLNDNSVIGKSKFLLPFRWNEIDDVKYKASIGVEFQIQVLTVNGKEVKSLIFQGRG
        +F +VL  +S +GKS  L  F  NE D+   KA+IGVEFQ QV+ +NGKE+K+ I+   G
Subjt:  MFNLVLNDNSVIGKSKFLLPFRWNEIDDVKYKASIGVEFQIQVLTVNGKEVKSLIFQGRG

SwissProt top hitse value%identityAlignment
P19892 Ras-related protein RABA5e7.0e-0541.67Show/hide
Query:  MFNLVLNDNSVIGKSKFLLPFRWNEIDDVKYKASIGVEFQIQVLTVNGKEVKSLIFQGRG
        +F +V+  +S +GKS  L  +  NE      KA+IGVEFQ Q + + GKEVK+ I+   G
Subjt:  MFNLVLNDNSVIGKSKFLLPFRWNEIDDVKYKASIGVEFQIQVLTVNGKEVKSLIFQGRG

P28187 Ras-related protein RABA5c3.1e-0541.67Show/hide
Query:  MFNLVLNDNSVIGKSKFLLPFRWNEIDDVKYKASIGVEFQIQVLTVNGKEVKSLIFQGRG
        +F +V+  +S +GKS  L  +  NE +    KA+IGVEFQ Q + ++GKEVK+ I+   G
Subjt:  MFNLVLNDNSVIGKSKFLLPFRWNEIDDVKYKASIGVEFQIQVLTVNGKEVKSLIFQGRG

Q9FGK5 Ras-related protein RABA5a7.0e-0541.67Show/hide
Query:  MFNLVLNDNSVIGKSKFLLPFRWNEIDDVKYKASIGVEFQIQVLTVNGKEVKSLIFQGRG
        +F +VL  +S +GKS  L  F  +E      K++IGVEFQ Q + +NGKE+K+ I+   G
Subjt:  MFNLVLNDNSVIGKSKFLLPFRWNEIDDVKYKASIGVEFQIQVLTVNGKEVKSLIFQGRG

Q9SIP0 Ras-related protein RABA5d7.0e-0541.67Show/hide
Query:  MFNLVLNDNSVIGKSKFLLPFRWNEIDDVKYKASIGVEFQIQVLTVNGKEVKSLIFQGRG
        +F +V+  +S +GKS  L  +  NE  +   KA+IGVEFQ Q + + GKEVK+ I+   G
Subjt:  MFNLVLNDNSVIGKSKFLLPFRWNEIDDVKYKASIGVEFQIQVLTVNGKEVKSLIFQGRG

Q9SRS5 Ras-related protein RABA5b6.3e-0645Show/hide
Query:  MFNLVLNDNSVIGKSKFLLPFRWNEIDDVKYKASIGVEFQIQVLTVNGKEVKSLIFQGRG
        +F +VL  +S +GKS  L  F  +E  D   KA+IGVEFQ Q++ + GKEVK+ I+   G
Subjt:  MFNLVLNDNSVIGKSKFLLPFRWNEIDDVKYKASIGVEFQIQVLTVNGKEVKSLIFQGRG

Arabidopsis top hitse value%identityAlignment
AT1G05810.1 RAB GTPase homolog A5E5.0e-0641.67Show/hide
Query:  MFNLVLNDNSVIGKSKFLLPFRWNEIDDVKYKASIGVEFQIQVLTVNGKEVKSLIFQGRG
        +F +V+  +S +GKS  L  +  NE      KA+IGVEFQ Q + + GKEVK+ I+   G
Subjt:  MFNLVLNDNSVIGKSKFLLPFRWNEIDDVKYKASIGVEFQIQVLTVNGKEVKSLIFQGRG

AT2G31680.1 RAB GTPase homolog A5D5.0e-0641.67Show/hide
Query:  MFNLVLNDNSVIGKSKFLLPFRWNEIDDVKYKASIGVEFQIQVLTVNGKEVKSLIFQGRG
        +F +V+  +S +GKS  L  +  NE  +   KA+IGVEFQ Q + + GKEVK+ I+   G
Subjt:  MFNLVLNDNSVIGKSKFLLPFRWNEIDDVKYKASIGVEFQIQVLTVNGKEVKSLIFQGRG

AT2G43130.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein2.2e-0641.67Show/hide
Query:  MFNLVLNDNSVIGKSKFLLPFRWNEIDDVKYKASIGVEFQIQVLTVNGKEVKSLIFQGRG
        +F +V+  +S +GKS  L  +  NE +    KA+IGVEFQ Q + ++GKEVK+ I+   G
Subjt:  MFNLVLNDNSVIGKSKFLLPFRWNEIDDVKYKASIGVEFQIQVLTVNGKEVKSLIFQGRG

AT3G07410.1 RAB GTPase homolog A5B4.5e-0745Show/hide
Query:  MFNLVLNDNSVIGKSKFLLPFRWNEIDDVKYKASIGVEFQIQVLTVNGKEVKSLIFQGRG
        +F +VL  +S +GKS  L  F  +E  D   KA+IGVEFQ Q++ + GKEVK+ I+   G
Subjt:  MFNLVLNDNSVIGKSKFLLPFRWNEIDDVKYKASIGVEFQIQVLTVNGKEVKSLIFQGRG

AT5G47520.1 RAB GTPase homolog A5A5.0e-0641.67Show/hide
Query:  MFNLVLNDNSVIGKSKFLLPFRWNEIDDVKYKASIGVEFQIQVLTVNGKEVKSLIFQGRG
        +F +VL  +S +GKS  L  F  +E      K++IGVEFQ Q + +NGKE+K+ I+   G
Subjt:  MFNLVLNDNSVIGKSKFLLPFRWNEIDDVKYKASIGVEFQIQVLTVNGKEVKSLIFQGRG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCAACCTTGTTTTGAACGACAACTCTGTTATCGGGAAATCGAAGTTCCTCTTGCCATTCCGTTGGAATGAGATTGATGATGTTAAGTACAAGGCCTCAATCGGCGT
CGAGTTTCAGATTCAAGTGCTGACAGTCAATGGCAAAGAGGTTAAGTCTCTCATATTTCAAGGTAGGGGATTCTTGGATGATGGGTTTTGGTGGAGGAATCCCAAACAAG
AAAAAAGGCCTTTTAATAATCCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTCAACCTTGTTTTGAACGACAACTCTGTTATCGGGAAATCGAAGTTCCTCTTGCCATTCCGTTGGAATGAGATTGATGATGTTAAGTACAAGGCCTCAATCGGCGT
CGAGTTTCAGATTCAAGTGCTGACAGTCAATGGCAAAGAGGTTAAGTCTCTCATATTTCAAGGTAGGGGATTCTTGGATGATGGGTTTTGGTGGAGGAATCCCAAACAAG
AAAAAAGGCCTTTTAATAATCCCTAA
Protein sequenceShow/hide protein sequence
MFNLVLNDNSVIGKSKFLLPFRWNEIDDVKYKASIGVEFQIQVLTVNGKEVKSLIFQGRGFLDDGFWWRNPKQEKRPFNNP