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IVF0005317 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0005317
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptionextensin-like
Genome locationchr01:8566935..8567980
RNA-Seq ExpressionIVF0005317
SyntenyIVF0005317
Gene Ontology termsGO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0068050.1 hypothetical protein E6C27_scaffold4741G00020 [Cucumis melo var. makuwa]1.03e-102100Show/hide
Query:  MQGKIGPPIMVSLVISVLVVALSLSYTTVQAYQDSYSSTLTFKDHDKHKSPPPPSRKKSPPPPPPSKRKSPPPPPPKRNEYLSPPPPPKKHDNKSPPPPP
        MQGKIGPPIMVSLVISVLVVALSLSYTTVQAYQDSYSSTLTFKDHDKHKSPPPPSRKKSPPPPPPSKRKSPPPPPPKRNEYLSPPPPPKKHDNKSPPPPP
Subjt:  MQGKIGPPIMVSLVISVLVVALSLSYTTVQAYQDSYSSTLTFKDHDKHKSPPPPSRKKSPPPPPPSKRKSPPPPPPKRNEYLSPPPPPKKHDNKSPPPPP

Query:  PKEKTPPRPRKSPPPPPPRKHDNKSPPPPPPRKRDNKSPPPPPPKKHEYDSYPPPPPPRKHKDKSPLHHDPLTIN
        PKEKTPPRPRKSPPPPPPRKHDNKSPPPPPPRKRDNKSPPPPPPKKHEYDSYPPPPPPRKHKDKSPLHHDPLTIN
Subjt:  PKEKTPPRPRKSPPPPPPRKHDNKSPPPPPPRKRDNKSPPPPPPKKHEYDSYPPPPPPRKHKDKSPLHHDPLTIN

XP_011659754.2 extensin-3-like [Cucumis sativus]1.90e-4560.77Show/hide
Query:  MQGKIGPPIMVSLVISVLVVALSLSYTTV-QAYQDSYSSTLTFKDHDK-----------------HKSPPPPSRKKSPPPPPPSKRKSPPPPPPKRNEYL
        MQGK+GPP+M+SLVI+VLVVALSLSYTT  QA++DSYSSTLTF DHD                  H         KSPPPPP  KRKSPPPPPPKR+EYL
Subjt:  MQGKIGPPIMVSLVISVLVVALSLSYTTV-QAYQDSYSSTLTFKDHDK-----------------HKSPPPPSRKKSPPPPPPSKRKSPPPPPPKRNEYL

Query:  SPPPPPKKHDNKSPPPPPPKEKTPPRPRKSPPPPPPRKHDNKSPPPPPPRKRDNK-SPPPPPPKKHEYDSY---------------PPPPPPRKHKDKSP
        SPPPPP     K  PPPPPK+  PP P+KSPPPPP +K DNKSPPPPPP+K +++ S PPPPPKK E++ Y               PPPPPP+KHKDKS 
Subjt:  SPPPPPKKHDNKSPPPPPPKEKTPPRPRKSPPPPPPRKHDNKSPPPPPPRKRDNK-SPPPPPPKKHEYDSY---------------PPPPPPRKHKDKSP

Query:  LHHDPLTIN
        LHHDPLTIN
Subjt:  LHHDPLTIN

XP_021978126.2 extensin-3 [Helianthus annuus]2.06e-1453.22Show/hide
Query:  VSLVISVLVVALSLSYTTVQAYQDSYSSTLTF-KDHDKHKSPPPPSRKKSPPPPPPSKR---KSPPPPPPKRNE-YLSPPPPPKKHDN--KSPPPPPPKE
        V+L+++++VV LS S+ ++      YSS     K+H  +KSPPPP  KKSPPPPPP      KSPPPPPPK +  Y SPPPPP K     KSPPPPPPK+
Subjt:  VSLVISVLVVALSLSYTTVQAYQDSYSSTLTF-KDHDKHKSPPPPSRKKSPPPPPPSKR---KSPPPPPPKRNE-YLSPPPPPKKHDN--KSPPPPPPKE

Query:  KTPPRPR-----KSPPPPPPRKHDNKSPPPPPPRKRDNKSPPPPPPKKHEYDSYPPPPPPRKHKDKSPLHH
          PP P+     KSPPPPPP+K    SPPPPP      KSPPPPPPK+H     PPPPPP+K     P HH
Subjt:  KTPPRPR-----KSPPPPPPRKHDNKSPPPPPPRKRDNKSPPPPPPKKHEYDSYPPPPPPRKHKDKSPLHH

XP_022039692.1 extensin-3-like [Helianthus annuus]9.78e-1453.89Show/hide
Query:  SLVISVLVVALSLSYTTVQAYQDSYSSTLTFKDHDKHKSPPPPSRK---KSPPPPPPSKRKSPPPPPPKRNEYLSPPPPPKKHD-NKSPPPPPPKE----
        +L+I++LVV +SLS+ ++      YSS          KSPPPP+     KSPPPPPP   KSPPPPP K  +Y SPPPPPK H   KSPPPPPPK+    
Subjt:  SLVISVLVVALSLSYTTVQAYQDSYSSTLTFKDHDKHKSPPPPSRK---KSPPPPPPSKRKSPPPPPPKRNEYLSPPPPPKKHD-NKSPPPPPPKE----

Query:  KTPPRPR-------KSPPPPPPRKHDN-KSPPPPPPRKR-DNKSPPPPPPKKHEYDSYPPPPPPRKHKD-KSPLHHDPLT
        K+PP P        KSPPPPPP+KH   KSPPPPPP+K  + KSPPPPPPK H     PPPPPP+KH + KSP    P T
Subjt:  KTPPRPR-------KSPPPPPPRKHDN-KSPPPPPPRKR-DNKSPPPPPPKKHEYDSYPPPPPPRKHKD-KSPLHHDPLT

XP_023535874.1 extensin-3-like [Cucurbita pepo subsp. pepo]1.04e-1351.61Show/hide
Query:  GPP-IMVSLVISVLVVALSLSYTTVQAYQDSYS-----------------------STLTFKDHDKHKSPPPPSRKKSPPP----PPPSKRKSPPPPPPK
        GPP I+V LVI+V V ALSLS T+ + Y D YS                       S    K  D+ KSPPPPS KKSPPP    PPP  +KSPPPPPP+
Subjt:  GPP-IMVSLVISVLVVALSLSYTTVQAYQDSYS-----------------------STLTFKDHDKHKSPPPPSRKKSPPP----PPPSKRKSPPPPPPK

Query:  RNEYLSPPPPPKKHDNKSPPPPPPKEKTPP--RPRKSPPPPPPRKHDNKSPPPPP----PRKRDNKSPPPPPPKKHEYDSYPPPPP
        +    SPPPP  K   KSPPPPPP++K+PP   P+KSPPPPPP+K    SPPPPP    PR    KSPPPP P   EY  +PPPPP
Subjt:  RNEYLSPPPPPKKHDNKSPPPPPPKEKTPP--RPRKSPPPPPPRKHDNKSPPPPP----PRKRDNKSPPPPPPKKHEYDSYPPPPP

TrEMBL top hitse value%identityAlignment
A0A251U7B1 Putative extensin 35.4e-1352.91Show/hide
Query:  MVSLVISVLVVALSLSYTTVQAYQDSYSS-TLTFKDHDKHKSPPPPSRKKSPPPPPPSK---RKSPPPPPPKRN-EYLSPPPPPKK--HDNKSPPPPPPK
        +V+L+++++VV LS S+ ++      YSS     K+H  +KSPPPP  KKSPPPPPP      KSPPPPPPK +  Y SPPPPP K  +  KSPPPPPPK
Subjt:  MVSLVISVLVVALSLSYTTVQAYQDSYSS-TLTFKDHDKHKSPPPPSRKKSPPPPPPSK---RKSPPPPPPKRN-EYLSPPPPPKK--HDNKSPPPPPPK

Query:  EKTPPRPR-----KSPPPPPPRKHDNKSPPPPPPRKRDNKSPPPPPPKKHEYDSYPPPPPPRKHKDKSPLHH
        +  PP P+     KSPPPPPP+    KSPPPPP      KSPPPPPPK+H     PPPPPP+K     P HH
Subjt:  EKTPPRPR-----KSPPPPPPRKHDNKSPPPPPPRKRDNKSPPPPPPKKHEYDSYPPPPPPRKHKDKSPLHH

A0A5A7VLF0 Uncharacterized protein2.5e-79100Show/hide
Query:  MQGKIGPPIMVSLVISVLVVALSLSYTTVQAYQDSYSSTLTFKDHDKHKSPPPPSRKKSPPPPPPSKRKSPPPPPPKRNEYLSPPPPPKKHDNKSPPPPP
        MQGKIGPPIMVSLVISVLVVALSLSYTTVQAYQDSYSSTLTFKDHDKHKSPPPPSRKKSPPPPPPSKRKSPPPPPPKRNEYLSPPPPPKKHDNKSPPPPP
Subjt:  MQGKIGPPIMVSLVISVLVVALSLSYTTVQAYQDSYSSTLTFKDHDKHKSPPPPSRKKSPPPPPPSKRKSPPPPPPKRNEYLSPPPPPKKHDNKSPPPPP

Query:  PKEKTPPRPRKSPPPPPPRKHDNKSPPPPPPRKRDNKSPPPPPPKKHEYDSYPPPPPPRKHKDKSPLHHDPLTIN
        PKEKTPPRPRKSPPPPPPRKHDNKSPPPPPPRKRDNKSPPPPPPKKHEYDSYPPPPPPRKHKDKSPLHHDPLTIN
Subjt:  PKEKTPPRPRKSPPPPPPRKHDNKSPPPPPPRKRDNKSPPPPPPKKHEYDSYPPPPPPRKHKDKSPLHHDPLTIN

A0A5J5BV08 Uncharacterized protein2.9e-1159.18Show/hide
Query:  KDHDKHKSPPPPSRK-----KSPPPPPPS---KRKSPPPPPPKRN-EYLSPPPPPKK--HDNKSPPPPPPKE----KTPPRPR-----KSPPPPPPRKH-
        K+H K+KSPPPP  K     KSPPPPPP    K KSPPPPPPK + +Y SPPPPP K  +  KSPPPPPPKE    K+PP P      KSPPPPPP+KH 
Subjt:  KDHDKHKSPPPPSRK-----KSPPPPPPS---KRKSPPPPPPKRN-EYLSPPPPPKK--HDNKSPPPPPPKE----KTPPRPR-----KSPPPPPPRKH-

Query:  DNKSPPPPPPRKR-DNKSPPPPPPKKH-EYDSYPPPPPPRKHKDKSP
          KSPPPPPP++    KSPPPPPPK+H +Y S PPP P  K+K   P
Subjt:  DNKSPPPPPPRKR-DNKSPPPPPPKKH-EYDSYPPPPPPRKHKDKSP

A0A6J1FDF6 extensin-3-like isoform X11.9e-1049.73Show/hide
Query:  PPIMVSLVISVLVVALSLSYTTVQAYQDSYS-----------------------STLTFKDHDKHKSPPPPSRKKSPP----PPPPSKRKSPPPPPPKRN
        P I+V LVI+V VVALSLS T+ + Y + YS                       S    K  D++KSPPPPS KKSPP    PPPP  +KSPPPPPP++ 
Subjt:  PPIMVSLVISVLVVALSLSYTTVQAYQDSYS-----------------------STLTFKDHDKHKSPPPPSRKKSPP----PPPPSKRKSPPPPPPKRN

Query:  EYLSPPPPPKKHDNKSPPPPPPKEKT--PPRPRKSPPPPPPRKHDNKSPPPP----PPRKRDNKSPPPPPPKKHEYDSYPPPPPP
            PPPPP     KSPPPPPP++K+  PP P+KSPPPPPP+    KSPPPP    PP+    KSPPPP P    Y S PPPP P
Subjt:  EYLSPPPPPKKHDNKSPPPPPPKEKT--PPRPRKSPPPPPPRKHDNKSPPPP----PPRKRDNKSPPPPPPKKHEYDSYPPPPPP

A0A7I8L3Z0 Hypothetical protein1.1e-1061.31Show/hide
Query:  KDHDKHKSPPPPSRK------KSPPPPPPSKR----KSPPPPPPKRNEYL---SPPPPPKKH-DNKSPPPPPPKEKTPPRPRKSPPPPPPRKH-DNKSPP
        KDH  +KSPPPP         KSPPPPPP K+    KSPPPPPP +  Y+    PPPPPKKH   KSPPPPPP +K      KSPPPPPP+KH   KSPP
Subjt:  KDHDKHKSPPPPSRK------KSPPPPPPSKR----KSPPPPPPKRNEYL---SPPPPPKKH-DNKSPPPPPPKEKTPPRPRKSPPPPPPRKH-DNKSPP

Query:  PPPPRKRD--NKSPPPPPPKKH-EYDSYPPPPPPRKH
        PPPP K     KSPPPPPPKKH  Y S PPPPPP+KH
Subjt:  PPPPRKRD--NKSPPPPPPKKH-EYDSYPPPPPPRKH

SwissProt top hitse value%identityAlignment
Q9FLQ7 Formin-like protein 203.4e-0450Show/hide
Query:  SPPPPS-RKKSPPPPPPSKRKSPPPPPPKRNEYLSPPPPPKKHDN----KSPPPPPPKEKTPPRPRKSPPPPPPRKHDNKSPPPPPPRKRDNKSPPPPPP
        SPPPPS     PPPPPP    SPPPPPP    Y SPPPPP           PPPPPP   +PP     PPPPPP  H +  PPPPPP      +PPPPPP
Subjt:  SPPPPS-RKKSPPPPPPSKRKSPPPPPPKRNEYLSPPPPPKKHDN----KSPPPPPPKEKTPPRPRKSPPPPPPRKHDNKSPPPPPPRKRDNKSPPPPPP

Query:  KKHEYDSYPPPPPPRKHKDKSP
              + PPPPPP  H    P
Subjt:  KKHEYDSYPPPPPPRKHKDKSP

Arabidopsis top hitse value%identityAlignment
AT5G07740.1 actin binding2.4e-0550Show/hide
Query:  SPPPPS-RKKSPPPPPPSKRKSPPPPPPKRNEYLSPPPPPKKHDN----KSPPPPPPKEKTPPRPRKSPPPPPPRKHDNKSPPPPPPRKRDNKSPPPPPP
        SPPPPS     PPPPPP    SPPPPPP    Y SPPPPP           PPPPPP   +PP     PPPPPP  H +  PPPPPP      +PPPPPP
Subjt:  SPPPPS-RKKSPPPPPPSKRKSPPPPPPKRNEYLSPPPPPKKHDN----KSPPPPPPKEKTPPRPRKSPPPPPPRKHDNKSPPPPPPRKRDNKSPPPPPP

Query:  KKHEYDSYPPPPPPRKHKDKSP
              + PPPPPP  H    P
Subjt:  KKHEYDSYPPPPPPRKHKDKSP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAGGAAAAATTGGTCCTCCTATAATGGTCTCTCTTGTTATTTCCGTTTTGGTGGTAGCTCTAAGCCTATCGTATACAACTGTTCAAGCCTACCAAGATTCCTACTC
TTCAACGCTTACCTTTAAGGATCATGACAAACACAAATCTCCACCCCCACCGTCTCGAAAGAAGTCTCCTCCACCGCCACCTCCATCCAAAAGGAAGTCCCCCCCTCCAC
CACCACCAAAGAGAAATGAATATCTCTCACCTCCACCACCTCCAAAAAAACACGATAACAAGTCACCTCCTCCTCCACCGCCAAAAGAGAAGACTCCTCCACGACCAAGA
AAGTCTCCCCCTCCACCACCACCAAGAAAGCATGATAACAAATCACCACCTCCACCACCACCAAGAAAGCGCGATAACAAGTCACCTCCACCACCGCCACCAAAGAAACA
CGAATATGACTCCTATCCTCCACCACCACCACCAAGGAAGCATAAGGACAAGTCCCCTCTCCACCACGATCCCCTCACAATTAATTAG
mRNA sequenceShow/hide mRNA sequence
CTTAGCTTTGAAGTGTTGAGGTAATGAAGAAGGATGCTCAAAGCTATATCTATATATATCTAAAAGGCAAAGATGGGTTCAAATCAAACTCACAATTAAGAAAACCCAAG
AGTTGTGGATATGCAAGGAAAAATTGGTCCTCCTATAATGGTCTCTCTTGTTATTTCCGTTTTGGTGGTAGCTCTAAGCCTATCGTATACAACTGTTCAAGCCTACCAAG
ATTCCTACTCTTCAACGCTTACCTTTAAGGATCATGACAAACACAAATCTCCACCCCCACCGTCTCGAAAGAAGTCTCCTCCACCGCCACCTCCATCCAAAAGGAAGTCC
CCCCCTCCACCACCACCAAAGAGAAATGAATATCTCTCACCTCCACCACCTCCAAAAAAACACGATAACAAGTCACCTCCTCCTCCACCGCCAAAAGAGAAGACTCCTCC
ACGACCAAGAAAGTCTCCCCCTCCACCACCACCAAGAAAGCATGATAACAAATCACCACCTCCACCACCACCAAGAAAGCGCGATAACAAGTCACCTCCACCACCGCCAC
CAAAGAAACACGAATATGACTCCTATCCTCCACCACCACCACCAAGGAAGCATAAGGACAAGTCCCCTCTCCACCACGATCCCCTCACAATTAATTAGGTCAATATAAGG
GATTCTCATCGACTATAAACCAAAAGAAGGAAAAAGAATAAAGAAGTGAAGAAGTATGTATTTAGGTCAACTAAAGAAAACAACTTAAAAGTGTTAAAAAGAAGGTTGTT
TTCATCTATTTGCTATACCTATGATTCTACGTGTTTTCTACGTGTGTCTTTAGTATTCCGTTGATTAAATAAAAGTCCATCTTACTTTCGTGTGTTTCCTAGGGAAAAAA
AGAATCAGCTCTTCTTATTCTTATGCGACACATGAAATATTAAATAGAAAATACGGTATAATTTTAT
Protein sequenceShow/hide protein sequence
MQGKIGPPIMVSLVISVLVVALSLSYTTVQAYQDSYSSTLTFKDHDKHKSPPPPSRKKSPPPPPPSKRKSPPPPPPKRNEYLSPPPPPKKHDNKSPPPPPPKEKTPPRPR
KSPPPPPPRKHDNKSPPPPPPRKRDNKSPPPPPPKKHEYDSYPPPPPPRKHKDKSPLHHDPLTIN