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IVF0005366 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0005366
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionTransposon Ty3-I Gag-Pol polyprotein
Genome locationchr05:8803025..8803342
RNA-Seq ExpressionIVF0005366
SyntenyIVF0005366
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0026294.1 cytochrome b561 and DOMON domain-containing protein [Cucumis melo var. makuwa]4.63e-1063.64Show/hide
Query:  KRVSSKDVANACKDEFGDKLHLGEMTSITCVPKGEQVRVFGAKR
        ++ SSKD+ANACK++FGD+L+L ++TSI CVPKGEQV V+G +R
Subjt:  KRVSSKDVANACKDEFGDKLHLGEMTSITCVPKGEQVRVFGAKR
KAA0032002.1 Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa]1.32e-1054.24Show/hide
Query:  LLKRVSSKDVANACKDEFGDKLHLGEMTSITCVPKGEQVRVFGAKRLSPLKAKYYKSYK
        L++R SSKDV N C++EFGD LH G++TSI C P+  QV   GA+RL  L  K+Y  YK
Subjt:  LLKRVSSKDVANACKDEFGDKLHLGEMTSITCVPKGEQVRVFGAKRLSPLKAKYYKSYK
KAA0051792.1 hypothetical protein E6C27_scaffold60G002010 [Cucumis melo var. makuwa]2.43e-0473.33Show/hide
Query:  VANACKDEFGDKLHLGEMTSITCVPKGEQV
        + NA K+EFGDKLHLG +TSI CV KGEQV
Subjt:  VANACKDEFGDKLHLGEMTSITCVPKGEQV
TYK07860.1 uncharacterized protein E5676_scaffold1933G00010 [Cucumis melo var. makuwa]1.30e-3968Show/hide
Query:  MASTCRQLLKRVSSKDVANACKDEFGDKLHLGEMTSITCVPKGEQVRVFGAKRLSPLKAKYYKSYKQQLLDLHRLIKFCHLHPERRVNVAFKKIRGARLN
        MA  CRQLL+RV+SKD+AN CK+EF   LH+ E+TSITCVPKGEQV V  A+RL PLK KYYKSYKQQL D++ L+KF HLHP+RR +V FK +RGA LN
Subjt:  MASTCRQLLKRVSSKDVANACKDEFGDKLHLGEMTSITCVPKGEQVRVFGAKRLSPLKAKYYKSYKQQLLDLHRLIKFCHLHPERRVNVAFKKIRGARLN
TYK21449.1 hypothetical protein E5676_scaffold609G001190 [Cucumis melo var. makuwa]2.00e-0473.33Show/hide
Query:  VANACKDEFGDKLHLGEMTSITCVPKGEQV
        + NA K+EFGDKLHLG +TSI CV KGEQV
Subjt:  VANACKDEFGDKLHLGEMTSITCVPKGEQV
TrEMBL top hitse value%identityAlignment
A0A5D3C951 Uncharacterized protein1.3e-3065.38Show/hide
Query:  MASTCRQLLKRVSSKDVANACKDEFGDKLHLGEMTSITCVPKGEQVRVFGAKRLSPLKAKYYKSYKQQLLDLHRLIKFCHLHPERRVNVAFKKIRGARLN
        MA  CRQLL+RV+SKD+AN CK+EF   LH+ E+TSITCVPKGEQV V  A+RL PLK KYYKSYKQQL D++ L+KF HLHP+RR +V FK +RGA LN
Subjt:  MASTCRQLLKRVSSKDVANACKDEFGDKLHLGEMTSITCVPKGEQVRVFGAKRLSPLKAKYYKSYKQQLLDLHRLIKFCHLHPERRVNVAFKKIRGARLN

Query:  NKLV
           +
Subjt:  NKLV
A0A5D3CY29 Transposon Ty3-I Gag-Pol polyprotein1.2e-0754.24Show/hide
Query:  LLKRVSSKDVANACKDEFGDKLHLGEMTSITCVPKGEQVRVFGAKRLSPLKAKYYKSYK
        L++R SSKDV N C++EFGD LH G++TSI C P+  QV   GA+RL  L  K+Y  YK
Subjt:  LLKRVSSKDVANACKDEFGDKLHLGEMTSITCVPKGEQVRVFGAKRLSPLKAKYYKSYK
A0A5D3DDG5 Cytochrome b561 and DOMON domain-containing protein9.1e-0863.64Show/hide
Query:  KRVSSKDVANACKDEFGDKLHLGEMTSITCVPKGEQVRVFGAKR
        ++ SSKD+ANACK++FGD+L+L ++TSI CVPKGEQV V+G +R
Subjt:  KRVSSKDVANACKDEFGDKLHLGEMTSITCVPKGEQVRVFGAKR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTAGCACTTGTCGTCAATTACTCAAGAGAGTAAGTAGCAAGGATGTGGCTAATGCGTGCAAGGACGAGTTTGGAGACAAACTCCATCTTGGCGAGATGACTTCCAT
CACTTGTGTCCCAAAAGGAGAACAAGTGCGAGTATTTGGTGCCAAGAGATTGTCACCCTTAAAAGCAAAGTACTATAAGTCTTATAAGCAACAACTGCTAGATTTACATC
GCTTAATAAAGTTTTGTCATTTGCATCCTGAGAGGCGAGTAAATGTGGCATTTAAGAAAATAAGAGGTGCTCGACTTAATAATAAGTTGGTTAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTAGCACTTGTCGTCAATTACTCAAGAGAGTAAGTAGCAAGGATGTGGCTAATGCGTGCAAGGACGAGTTTGGAGACAAACTCCATCTTGGCGAGATGACTTCCAT
CACTTGTGTCCCAAAAGGAGAACAAGTGCGAGTATTTGGTGCCAAGAGATTGTCACCCTTAAAAGCAAAGTACTATAAGTCTTATAAGCAACAACTGCTAGATTTACATC
GCTTAATAAAGTTTTGTCATTTGCATCCTGAGAGGCGAGTAAATGTGGCATTTAAGAAAATAAGAGGTGCTCGACTTAATAATAAGTTGGTTAACTGA
Protein sequenceShow/hide protein sequence
MASTCRQLLKRVSSKDVANACKDEFGDKLHLGEMTSITCVPKGEQVRVFGAKRLSPLKAKYYKSYKQQLLDLHRLIKFCHLHPERRVNVAFKKIRGARLNNKLVN