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IVF0005371 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0005371
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionTy3-gypsy retrotransposon protein
Genome locationchr11:20367775..20368080
RNA-Seq ExpressionIVF0005371
SyntenyIVF0005371
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049656.1 hypothetical protein E6C27_scaffold163G001250 [Cucumis melo var. makuwa]2.57e-2157.89Show/hide
Query:  EEDEVDEDYIFKFMDNFICKPLENEIEDIIQFQSNLQEIHLPSQRKLSDLKLKMDNANVNNEAQLHQLKGEIMELK
        EE+EVD  Y+FKF+D FICKPLE   ED  Q QSNLQE+ L SQ+++SDL+LK+DNA+ +N+AQ+ Q + E+ +LK
Subjt:  EEDEVDEDYIFKFMDNFICKPLENEIEDIIQFQSNLQEIHLPSQRKLSDLKLKMDNANVNNEAQLHQLKGEIMELK

KAA0063408.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]6.56e-1544.32Show/hide
Query:  RGEEDEVDEDYIFKFMDNFICKPLENEIEDIIQFQSNLQEIHLPSQRKLSDLKLKMDNANVNNEAQLHQLKGEIMELKTHNQEFQKQL
          +E+ +DEDY  KF+D+ +CKP+ N  E +I   SNL+E+HL  Q++  DL+LK DN N  N  Q+   + E+ ELKT N E   QL
Subjt:  RGEEDEVDEDYIFKFMDNFICKPLENEIEDIIQFQSNLQEIHLPSQRKLSDLKLKMDNANVNNEAQLHQLKGEIMELKTHNQEFQKQL

KAE8646246.1 hypothetical protein Csa_023826, partial [Cucumis sativus]7.86e-1664.29Show/hide
Query:  VDEDYIFKFMDNFICKPLENEIEDIIQFQSNLQEIHLPSQRKLSDLKLKMDNANVN
        VD+DYIF F+++ +CKP+EN  ED+IQ+QSNLQE+ L SQ++LSDL+LK+DNAN N
Subjt:  VDEDYIFKFMDNFICKPLENEIEDIIQFQSNLQEIHLPSQRKLSDLKLKMDNANVN

KGN49653.1 hypothetical protein Csa_018510 [Cucumis sativus]3.63e-1645.35Show/hide
Query:  DEDYIFKFMDNFICKPLENEIEDIIQFQSNLQEIHLPSQRKLSDLKLKMDNANVNNEAQLHQLKGEIMELKTHNQEFQKQLFIMRE
        DEDY  KF D+++CKP+ +  ED IQ QSN QE+H  SQ++L D KLK+DN N +++ Q+  LK ++ EL    QE + Q  ++ E
Subjt:  DEDYIFKFMDNFICKPLENEIEDIIQFQSNLQEIHLPSQRKLSDLKLKMDNANVNNEAQLHQLKGEIMELKTHNQEFQKQLFIMRE

TYK07283.1 hypothetical protein E5676_scaffold606G001830 [Cucumis melo var. makuwa]2.92e-2245.92Show/hide
Query:  RGEEDEVDEDYIFKFMDNFICKPLENEIEDIIQFQSNLQEIHLPSQRKLSDLKLKMDNANVNNEAQLHQLKGEIMELKTHNQEFQKQLFIMREQSEAM
        R +ED  DE+YIFKF+D+++CKP+ N  ED+IQ QSNLQ++HL  Q++L D ++K+ N N +++AQ+  LK E+ EL++ NQE + Q+ ++ E  E +
Subjt:  RGEEDEVDEDYIFKFMDNFICKPLENEIEDIIQFQSNLQEIHLPSQRKLSDLKLKMDNANVNNEAQLHQLKGEIMELKTHNQEFQKQLFIMREQSEAM

TrEMBL top hitse value%identityAlignment
A0A0A0KJB9 Uncharacterized protein1.0e-1145.35Show/hide
Query:  DEDYIFKFMDNFICKPLENEIEDIIQFQSNLQEIHLPSQRKLSDLKLKMDNANVNNEAQLHQLKGEIMELKTHNQEFQKQLFIMRE
        DEDY  KF D+++CKP+ +  ED IQ QSN QE+H  SQ++L D KLK+DN N +++ Q+  LK ++ EL    QE + Q  ++ E
Subjt:  DEDYIFKFMDNFICKPLENEIEDIIQFQSNLQEIHLPSQRKLSDLKLKMDNANVNNEAQLHQLKGEIMELKTHNQEFQKQLFIMRE

A0A5A7SRQ1 Drebrin-like5.5e-1050Show/hide
Query:  RGEEDEVDEDYIFKFMDNFICKPLENEIEDIIQFQSNLQEIHLPSQRKLSDLKLKMDNANVNNEAQLHQL
        R +E EVDE +IFKFMD++IC P+E   ED+I+ QSN +E+   S+++L DL+LK +NAN N++A++ +L
Subjt:  RGEEDEVDEDYIFKFMDNFICKPLENEIEDIIQFQSNLQEIHLPSQRKLSDLKLKMDNANVNNEAQLHQL

A0A5A7V749 Ty3-gypsy retrotransposon protein2.2e-1145.35Show/hide
Query:  EEDEVDEDYIFKFMDNFICKPLENEIEDIIQFQSNLQEIHLPSQRKLSDLKLKMDNANVNNEAQLHQLKGEIMELKTHNQEFQKQL
        +E+ +DEDY  KF+D+ +CKP+ N  E +I   SNL+E+HL  Q++  DL+LK DN N  N  Q+   + E+ ELKT N E   QL
Subjt:  EEDEVDEDYIFKFMDNFICKPLENEIEDIIQFQSNLQEIHLPSQRKLSDLKLKMDNANVNNEAQLHQLKGEIMELKTHNQEFQKQL

A0A5D3C5U6 Uncharacterized protein2.3e-1645Show/hide
Query:  RGEEDEVDEDYIFKFMDNFICKPLENEIEDIIQFQSNLQEIHLPSQRKLSDLKLKMDNANVNNEAQLHQLKGEIMELKTHNQEFQKQLFIMREQSEAMKE
        R +ED  DE+YIFKF+D+++CKP+ N  ED+IQ QSNLQ++HL  Q++L D ++K+ N N +++AQ+  LK E+ EL++ NQE + Q+ ++ E  E + +
Subjt:  RGEEDEVDEDYIFKFMDNFICKPLENEIEDIIQFQSNLQEIHLPSQRKLSDLKLKMDNANVNNEAQLHQLKGEIMELKTHNQEFQKQLFIMREQSEAMKE

A0A5D3D645 Uncharacterized protein5.6e-1557.89Show/hide
Query:  EEDEVDEDYIFKFMDNFICKPLENEIEDIIQFQSNLQEIHLPSQRKLSDLKLKMDNANVNNEAQLHQLKGEIMELK
        EE+EVD  Y+FKF+D FICKPLE   ED  Q QSNLQE+ L SQ+++SDL+LK+DNA+ +N+AQ+ Q + E+ +LK
Subjt:  EEDEVDEDYIFKFMDNFICKPLENEIEDIIQFQSNLQEIHLPSQRKLSDLKLKMDNANVNNEAQLHQLKGEIMELK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAGGAGAAGAAGACGAAGTTGATGAGGATTATATCTTTAAGTTCATGGACAATTTCATATGCAAGCCTTTGGAAAATGAAATTGAAGATATAATCCAGTTCCAAAG
CAACCTACAAGAGATACATTTGCCAAGTCAAAGAAAATTAAGCGACTTAAAGTTGAAGATGGACAATGCAAATGTAAACAATGAGGCACAATTACATCAACTTAAAGGGG
AAATCATGGAACTCAAAACGCATAACCAGGAGTTTCAAAAGCAACTTTTTATAATGAGGGAGCAAAGTGAGGCGATGAAGGAATAG
mRNA sequenceShow/hide mRNA sequence
ATGAGAGGAGAAGAAGACGAAGTTGATGAGGATTATATCTTTAAGTTCATGGACAATTTCATATGCAAGCCTTTGGAAAATGAAATTGAAGATATAATCCAGTTCCAAAG
CAACCTACAAGAGATACATTTGCCAAGTCAAAGAAAATTAAGCGACTTAAAGTTGAAGATGGACAATGCAAATGTAAACAATGAGGCACAATTACATCAACTTAAAGGGG
AAATCATGGAACTCAAAACGCATAACCAGGAGTTTCAAAAGCAACTTTTTATAATGAGGGAGCAAAGTGAGGCGATGAAGGAATAG
Protein sequenceShow/hide protein sequence
MRGEEDEVDEDYIFKFMDNFICKPLENEIEDIIQFQSNLQEIHLPSQRKLSDLKLKMDNANVNNEAQLHQLKGEIMELKTHNQEFQKQLFIMREQSEAMKE