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IVF0005445 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0005445
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGag-pro-like protein
Genome locationchr07:19030378..19031161
RNA-Seq ExpressionIVF0005445
SyntenyIVF0005445
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
GO:0140640 - catalytic activity, acting on a nucleic acid (molecular function)
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044913.1 uncharacterized protein E6C27_scaffold74G002080 [Cucumis melo var. makuwa]6.13e-10367.43Show/hide
Query:  MGKGKVIVDTAQSSNPIQDTDDPIYPPGFTPYHMNVPQSQTTQHYVLKNPLYVVPPIVPGIEHLEAQAKIQDMGQNENTPTKEKLDVLEERLLAIEGTDV
        MGKGKV VDTAQSSNPIQDTDD IYPPGFTPYHMNVPQSQTTQHYV  NPLYVVPPIVPGIEHLEAQAKIQDMGQNENTP K+KLDVLEERL AIEGTDV
Subjt:  MGKGKVIVDTAQSSNPIQDTDDPIYPPGFTPYHMNVPQSQTTQHYVLKNPLYVVPPIVPGIEHLEAQAKIQDMGQNENTPTKEKLDVLEERLLAIEGTDV

Query:  YGNIDATQLCL-------------------------------------------------------------------------DLADAFLKQYKHNIDM
        YGNIDATQLCL                                                                         DLADAFLKQYKHNIDM
Subjt:  YGNIDATQLCL-------------------------------------------------------------------------DLADAFLKQYKHNIDM

Query:  APDRLDLQQMEKKSSESFKEYAQRWRDMSVEVQPPLTDKEMTSMFMNTLRAPFYDRMIGNA
        AP+RLDLQ+MEKKSSESFKEYAQRWRDM+VEVQPPL DKEMTSMFMNTLRAPFY+RMIGNA
Subjt:  APDRLDLQQMEKKSSESFKEYAQRWRDMSVEVQPPLTDKEMTSMFMNTLRAPFYDRMIGNA

KAA0045013.1 Gag-pro-like protein [Cucumis melo var. makuwa]6.26e-11369.35Show/hide
Query:  MGKGKVIVDTAQSSNPIQDTDDPIYPPGFTPYHMNVPQSQTTQHYVLKNPLYVVPPIVPGIEHLEAQAKIQDMGQNENTPTKEKLDVLEERLLAIEGTDV
        MGKGKV+VDTAQSSNPIQDTDDPIYPPGFT YHMNVPQSQT QHYV KNPLY VPPIVPGIEHLEAQAKIQDMGQNENTPTKEKLDVLEERLLAIEGTDV
Subjt:  MGKGKVIVDTAQSSNPIQDTDDPIYPPGFTPYHMNVPQSQTTQHYVLKNPLYVVPPIVPGIEHLEAQAKIQDMGQNENTPTKEKLDVLEERLLAIEGTDV

Query:  YGNIDATQLCL-------------------------------------------------------------------------DLADAFLKQYKHNIDM
        YGNIDATQLCL                                                                         DLAD FLKQYKHNIDM
Subjt:  YGNIDATQLCL-------------------------------------------------------------------------DLADAFLKQYKHNIDM

Query:  APDRLDLQQMEKKSSESFKEYAQRWRDMSVEVQPPLTDKEMTSMFMNTLRAPFYDRMIGNA
        APDRLDLQQMEKKSSESFKEYAQRWRDMSVEV PPLTDKEMTSMFMNTLRAPFYDRMIGNA
Subjt:  APDRLDLQQMEKKSSESFKEYAQRWRDMSVEVQPPLTDKEMTSMFMNTLRAPFYDRMIGNA

TYK16462.1 girdin-like [Cucumis melo var. makuwa]1.17e-10576.21Show/hide
Query:  MGKGKVIVDTAQSSNPIQDTDDPIYPPGFTPYHMNVPQSQTTQHYVLKNPLYVVPPIVPGIEHLEAQAKIQDMGQNENTPTKEKLDVLEERLLAIEGTDV
        MGKGKVIVDTAQSSNPIQDTDDPIYPPGFTPYHMNVPQSQTTQHYVLKNPLYVVPPIVPGIEHLEAQAKIQDMGQNENTPTKEKLDVLEERLLAIEGTDV
Subjt:  MGKGKVIVDTAQSSNPIQDTDDPIYPPGFTPYHMNVPQSQTTQHYVLKNPLYVVPPIVPGIEHLEAQAKIQDMGQNENTPTKEKLDVLEERLLAIEGTDV

Query:  YGNIDATQLCLDLADAFLKQYK------HNIDMAP---------------------------------DRLDLQQMEKKSSESFKEYAQRWRDMSVEVQP
        YGNIDATQLCL      L ++K      +N    P                                 +RLDLQQMEKKSSESFKEYAQRWRDMSVEVQP
Subjt:  YGNIDATQLCLDLADAFLKQYK------HNIDMAP---------------------------------DRLDLQQMEKKSSESFKEYAQRWRDMSVEVQP

Query:  PLTDKEMTSMFMNTLRAPFYDRMIGNA
        PLTDKEMTSMFMNTLRAPFYDRMIGNA
Subjt:  PLTDKEMTSMFMNTLRAPFYDRMIGNA

XP_008463191.1 PREDICTED: uncharacterized protein LOC103501400 [Cucumis melo]8.51e-10564.37Show/hide
Query:  MGKGKVIVDTAQSSNPIQDTDDPIYPPGFTPYHMNVPQSQTTQHYVLKNPLYVVPPIVPGIEHLEAQAKIQDMGQNENTPTKEKLDVLEERLLAIEGTDV
        MGKGKV VDTAQ SNPIQDTDDPIYPPGFTPYHMNVPQSQTTQHY+  NPLYVVPPIVPG+EHLEAQAKIQDMGQN+NT  K+KLD+LEERL AIEGTDV
Subjt:  MGKGKVIVDTAQSSNPIQDTDDPIYPPGFTPYHMNVPQSQTTQHYVLKNPLYVVPPIVPGIEHLEAQAKIQDMGQNENTPTKEKLDVLEERLLAIEGTDV

Query:  YGNIDATQLCL-------------------------------------------------------------------------DLADAFLKQYKHNIDM
        YGNIDATQLCL                                                                         DLADAFLKQ+KHNIDM
Subjt:  YGNIDATQLCL-------------------------------------------------------------------------DLADAFLKQYKHNIDM

Query:  APDRLDLQQMEKKSSESFKEYAQRWRDMSVEVQPPLTDKEMTSMFMNTLRAPFYDRMIGNA
        APDRL+LQ+MEKKSSESFKEY QRWRDM+ EVQPPLT+KEMTSMFMNTLRAPFY+RMIGNA
Subjt:  APDRLDLQQMEKKSSESFKEYAQRWRDMSVEVQPPLTDKEMTSMFMNTLRAPFYDRMIGNA

XP_008465589.1 PREDICTED: uncharacterized protein LOC103503225 [Cucumis melo]1.64e-10566.67Show/hide
Query:  MGKGKVIVDTAQSSNPIQDTDDPIYPPGFTPYHMNVPQSQTTQHYVLKNPLYVVPPIVPGIEHLEAQAKIQDMGQNENTPTKEKLDVLEERLLAIEGTDV
        MGKGKV VDTAQSSNPIQDTDD IYPPGFTPYHMNVPQSQT QHYV  NPLYVVPPIVPGIEHLEAQAKIQDMGQNENTP K+KLDVLEERL AIEGTDV
Subjt:  MGKGKVIVDTAQSSNPIQDTDDPIYPPGFTPYHMNVPQSQTTQHYVLKNPLYVVPPIVPGIEHLEAQAKIQDMGQNENTPTKEKLDVLEERLLAIEGTDV

Query:  YGNIDATQLCL-------------------------------------------------------------------------DLADAFLKQYKHNIDM
        YGNIDATQLCL                                                                         DLADAFLKQYKHNIDM
Subjt:  YGNIDATQLCL-------------------------------------------------------------------------DLADAFLKQYKHNIDM

Query:  APDRLDLQQMEKKSSESFKEYAQRWRDMSVEVQPPLTDKEMTSMFMNTLRAPFYDRMIGNA
        AP+RLDLQ+MEKKSSESFKEYAQRW+DM+VEVQPPL DKEMTSMFMNTLRAPFY+RMIGNA
Subjt:  APDRLDLQQMEKKSSESFKEYAQRWRDMSVEVQPPLTDKEMTSMFMNTLRAPFYDRMIGNA

TrEMBL top hitse value%identityAlignment
A0A1S3CQP2 uncharacterized protein LOC1035032255.6e-8566.67Show/hide
Query:  MGKGKVIVDTAQSSNPIQDTDDPIYPPGFTPYHMNVPQSQTTQHYVLKNPLYVVPPIVPGIEHLEAQAKIQDMGQNENTPTKEKLDVLEERLLAIEGTDV
        MGKGKV VDTAQSSNPIQDTDD IYPPGFTPYHMNVPQSQT QHYV  NPLYVVPPIVPGIEHLEAQAKIQDMGQNENTP K+KLDVLEERL AIEGTDV
Subjt:  MGKGKVIVDTAQSSNPIQDTDDPIYPPGFTPYHMNVPQSQTTQHYVLKNPLYVVPPIVPGIEHLEAQAKIQDMGQNENTPTKEKLDVLEERLLAIEGTDV

Query:  YGNIDATQLCL-------------------------------------------------------------------------DLADAFLKQYKHNIDM
        YGNIDATQLCL                                                                         DLADAFLKQYKHNIDM
Subjt:  YGNIDATQLCL-------------------------------------------------------------------------DLADAFLKQYKHNIDM

Query:  APDRLDLQQMEKKSSESFKEYAQRWRDMSVEVQPPLTDKEMTSMFMNTLRAPFYDRMIGNA
        AP+RLDLQ+MEKKSSESFKEYAQRW+DM+VEVQPPL DKEMTSMFMNTLRAPFY+RMIGNA
Subjt:  APDRLDLQQMEKKSSESFKEYAQRWRDMSVEVQPPLTDKEMTSMFMNTLRAPFYDRMIGNA

A0A5A7TNC2 Gag-pro-like protein3.8e-8969.35Show/hide
Query:  MGKGKVIVDTAQSSNPIQDTDDPIYPPGFTPYHMNVPQSQTTQHYVLKNPLYVVPPIVPGIEHLEAQAKIQDMGQNENTPTKEKLDVLEERLLAIEGTDV
        MGKGKV+VDTAQSSNPIQDTDDPIYPPGFT YHMNVPQSQT QHYV KNPLY VPPIVPGIEHLEAQAKIQDMGQNENTPTKEKLDVLEERLLAIEGTDV
Subjt:  MGKGKVIVDTAQSSNPIQDTDDPIYPPGFTPYHMNVPQSQTTQHYVLKNPLYVVPPIVPGIEHLEAQAKIQDMGQNENTPTKEKLDVLEERLLAIEGTDV

Query:  YGNIDATQLCL-------------------------------------------------------------------------DLADAFLKQYKHNIDM
        YGNIDATQLCL                                                                         DLAD FLKQYKHNIDM
Subjt:  YGNIDATQLCL-------------------------------------------------------------------------DLADAFLKQYKHNIDM

Query:  APDRLDLQQMEKKSSESFKEYAQRWRDMSVEVQPPLTDKEMTSMFMNTLRAPFYDRMIGNA
        APDRLDLQQMEKKSSESFKEYAQRWRDMSVEV PPLTDKEMTSMFMNTLRAPFYDRMIGNA
Subjt:  APDRLDLQQMEKKSSESFKEYAQRWRDMSVEVQPPLTDKEMTSMFMNTLRAPFYDRMIGNA

A0A5D3CXD6 Retrotrans_gag domain-containing protein5.1e-8667.43Show/hide
Query:  MGKGKVIVDTAQSSNPIQDTDDPIYPPGFTPYHMNVPQSQTTQHYVLKNPLYVVPPIVPGIEHLEAQAKIQDMGQNENTPTKEKLDVLEERLLAIEGTDV
        MGKGKV VDTAQSSNPIQDTDD IYPPGFTPYHMNVPQSQTTQHYV  NPLYVVPPIVPGIEHLEAQAKIQDMGQNENTP K+KLDVLEERL AIEGTDV
Subjt:  MGKGKVIVDTAQSSNPIQDTDDPIYPPGFTPYHMNVPQSQTTQHYVLKNPLYVVPPIVPGIEHLEAQAKIQDMGQNENTPTKEKLDVLEERLLAIEGTDV

Query:  YGNIDATQLCL-------------------------------------------------------------------------DLADAFLKQYKHNIDM
        YGNIDATQLCL                                                                         DLADAFLKQYKHNIDM
Subjt:  YGNIDATQLCL-------------------------------------------------------------------------DLADAFLKQYKHNIDM

Query:  APDRLDLQQMEKKSSESFKEYAQRWRDMSVEVQPPLTDKEMTSMFMNTLRAPFYDRMIGNA
        AP+RLDLQ+MEKKSSESFKEYAQRWRDM+VEVQPPL DKEMTSMFMNTLRAPFY+RMIGNA
Subjt:  APDRLDLQQMEKKSSESFKEYAQRWRDMSVEVQPPLTDKEMTSMFMNTLRAPFYDRMIGNA

A0A5D3CY27 Girdin-like2.5e-8576.21Show/hide
Query:  MGKGKVIVDTAQSSNPIQDTDDPIYPPGFTPYHMNVPQSQTTQHYVLKNPLYVVPPIVPGIEHLEAQAKIQDMGQNENTPTKEKLDVLEERLLAIEGTDV
        MGKGKVIVDTAQSSNPIQDTDDPIYPPGFTPYHMNVPQSQTTQHYVLKNPLYVVPPIVPGIEHLEAQAKIQDMGQNENTPTKEKLDVLEERLLAIEGTDV
Subjt:  MGKGKVIVDTAQSSNPIQDTDDPIYPPGFTPYHMNVPQSQTTQHYVLKNPLYVVPPIVPGIEHLEAQAKIQDMGQNENTPTKEKLDVLEERLLAIEGTDV

Query:  YGNIDATQLCLDLADAFLKQY------KHNIDMAP---------------------------------DRLDLQQMEKKSSESFKEYAQRWRDMSVEVQP
        YGNIDATQLCL      L ++      K+N    P                                 +RLDLQQMEKKSSESFKEYAQRWRDMSVEVQP
Subjt:  YGNIDATQLCLDLADAFLKQY------KHNIDMAP---------------------------------DRLDLQQMEKKSSESFKEYAQRWRDMSVEVQP

Query:  PLTDKEMTSMFMNTLRAPFYDRMIGNA
        PLTDKEMTSMFMNTLRAPFYDRMIGNA
Subjt:  PLTDKEMTSMFMNTLRAPFYDRMIGNA

A0A5D3D524 Retrotrans_gag domain-containing protein4.3e-8573.04Show/hide
Query:  MGKGKVIVDTAQSSNPIQDTDDPIYPPGFTPYHMNVPQSQTTQHYVLKNPLYVVPPIVPGIEHLEAQAKIQDMGQNENTPTKEKLDVLEERLLAIEGTDV
        MGKGKV VD AQSSNPIQDTDDPIYPPGFTPYH+NVPQSQTTQHYV  NPLYVVPPIVPGIEHLEAQAKIQDMGQNENTP K+KLDVLEERL AIEG D 
Subjt:  MGKGKVIVDTAQSSNPIQDTDDPIYPPGFTPYHMNVPQSQTTQHYVLKNPLYVVPPIVPGIEHLEAQAKIQDMGQNENTPTKEKLDVLEERLLAIEGTDV

Query:  YGNIDATQLCL---------------------------------------------DLADAFLKQYKHNIDMAPDRLDLQQMEKKSSESFKEYAQRWRDM
        YGNIDATQLCL                                             +LADAFLKQYKHNIDMAPD LDLQQMEKKSSESF EY+QRWRDM
Subjt:  YGNIDATQLCL---------------------------------------------DLADAFLKQYKHNIDMAPDRLDLQQMEKKSSESFKEYAQRWRDM

Query:  SVEVQPPLTDKEMTSMFMNTLRAPFYDRMI
        +VEVQPPLTDKEMTSMFMNTLRAPFY++MI
Subjt:  SVEVQPPLTDKEMTSMFMNTLRAPFYDRMI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAAAGGAAAAGTCATTGTAGATACAGCACAATCAAGCAATCCAATTCAAGACACAGATGATCCCATTTATCCTCCAGGATTCACTCCATACCACATGAATGTTCC
ACAATCTCAAACCACTCAACACTATGTTCTTAAGAATCCGCTGTATGTTGTTCCACCCATTGTCCCAGGTATAGAACATTTGGAAGCTCAGGCTAAAATTCAAGACATGG
GACAAAACGAGAACACTCCGACTAAGGAAAAGTTAGATGTTTTGGAAGAAAGGTTGCTAGCAATTGAAGGAACTGATGTCTATGGAAATATAGATGCAACACAATTATGC
TTGGACTTAGCTGATGCATTTCTAAAGCAATACAAACACAACATTGATATGGCTCCAGACCGTTTAGACTTGCAACAGATGGAGAAGAAGAGTTCGGAAAGCTTCAAAGA
ATATGCTCAACGATGGAGAGATATGTCTGTTGAGGTTCAGCCACCGTTAACAGACAAAGAAATGACATCTATGTTTATGAATACCTTGCGGGCTCCATTCTATGATCGAA
TGATTGGTAATGCATAA
mRNA sequenceShow/hide mRNA sequence
ATGGGGAAAGGAAAAGTCATTGTAGATACAGCACAATCAAGCAATCCAATTCAAGACACAGATGATCCCATTTATCCTCCAGGATTCACTCCATACCACATGAATGTTCC
ACAATCTCAAACCACTCAACACTATGTTCTTAAGAATCCGCTGTATGTTGTTCCACCCATTGTCCCAGGTATAGAACATTTGGAAGCTCAGGCTAAAATTCAAGACATGG
GACAAAACGAGAACACTCCGACTAAGGAAAAGTTAGATGTTTTGGAAGAAAGGTTGCTAGCAATTGAAGGAACTGATGTCTATGGAAATATAGATGCAACACAATTATGC
TTGGACTTAGCTGATGCATTTCTAAAGCAATACAAACACAACATTGATATGGCTCCAGACCGTTTAGACTTGCAACAGATGGAGAAGAAGAGTTCGGAAAGCTTCAAAGA
ATATGCTCAACGATGGAGAGATATGTCTGTTGAGGTTCAGCCACCGTTAACAGACAAAGAAATGACATCTATGTTTATGAATACCTTGCGGGCTCCATTCTATGATCGAA
TGATTGGTAATGCATAA
Protein sequenceShow/hide protein sequence
MGKGKVIVDTAQSSNPIQDTDDPIYPPGFTPYHMNVPQSQTTQHYVLKNPLYVVPPIVPGIEHLEAQAKIQDMGQNENTPTKEKLDVLEERLLAIEGTDVYGNIDATQLC
LDLADAFLKQYKHNIDMAPDRLDLQQMEKKSSESFKEYAQRWRDMSVEVQPPLTDKEMTSMFMNTLRAPFYDRMIGNA