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IVF0005472 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0005472
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionTranscription factor bHLH36-like
Genome locationchr12:16902410..16902744
RNA-Seq ExpressionIVF0005472
SyntenyIVF0005472
Gene Ontology termsGO:0010556 - regulation of macromolecule biosynthetic process (biological process)
GO:0031326 - regulation of cellular biosynthetic process (biological process)
GO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033316.1 transcription factor bHLH36-like [Cucumis melo var. makuwa]7.36e-2860.19Show/hide
Query:  MDKGVVELGKEREGQRRQEISALYMSLRTLLPLGFIKVICGIVHRGRDKRRSP----------------------RCGSLLLRRKDVEMRRMRLRLRFSS
        MDK VVELG+ERE QRRQEISALYM LR LLPL FIKVICG VHRGRDK+R                        R GS L RRKD+EMRR+ LRL FS 
Subjt:  MDKGVVELGKEREGQRRQEISALYMSLRTLLPLGFIKVICGIVHRGRDKRRSP----------------------RCGSLLLRRKDVEMRRMRLRLRFSS

Query:  CVV
        CV+
Subjt:  CVV

KAA0034002.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]4.42e-0657.41Show/hide
Query:  GIVHRGRDKRRSPRCGSLLLRRKDVEMRRMRLRLRFSSCVVVAVCEERNFEEGK
        G +  G  +  SPR GS   RRKD+EMRRM LRL FSSCVVV V E    +EGK
Subjt:  GIVHRGRDKRRSPRCGSLLLRRKDVEMRRMRLRLRFSSCVVVAVCEERNFEEGK

KAA0044825.1 transcription factor bHLH36-like [Cucumis melo var. makuwa]4.60e-1459.38Show/hide
Query:  MDKGVVELGKEREGQRRQEISALYMSLRTLLPLGFIKVICGIVHRGRDKRRSPRCGSLLLRRKD
        MDKGVVELG+ERE QRRQEISALYMSLRTLLPL FIKV         D++   + G  ++ R  
Subjt:  MDKGVVELGKEREGQRRQEISALYMSLRTLLPLGFIKVICGIVHRGRDKRRSPRCGSLLLRRKD

KAA0065871.1 retrotransposon protein [Cucumis melo var. makuwa]2.47e-1564.18Show/hide
Query:  MDKGVVELGKEREGQRRQEISALYMSLRTLLPLGFIKVICGIVHRGRDKRRSPRCGSLLLRRKDVEM
        MDKGVV+L +ERE QRRQEI ALYM++RTLL L FIKVICGIVHR RDK R  +      ++KD E+
Subjt:  MDKGVVELGKEREGQRRQEISALYMSLRTLLPLGFIKVICGIVHRGRDKRRSPRCGSLLLRRKDVEM

TYK30150.1 transcription factor bHLH36 [Cucumis melo var. makuwa]1.27e-1967.16Show/hide
Query:  MDKGVVELGKEREGQRRQEISALYMSLRTLLPLGFIKVICGIVHRGRDKRRSPRCGSLLLRRKDVEM
        MDKG+VELG+ERE QRRQEI ALYMSLRTLLPL FIKVI G +HRGRDK R  +      ++KD E+
Subjt:  MDKGVVELGKEREGQRRQEISALYMSLRTLLPLGFIKVICGIVHRGRDKRRSPRCGSLLLRRKDVEM

TrEMBL top hitse value%identityAlignment
A0A5A7STJ5 Transcription factor bHLH36-like7.1e-2060.19Show/hide
Query:  MDKGVVELGKEREGQRRQEISALYMSLRTLLPLGFIKVICGIVHRGRDKRRSP----------------------RCGSLLLRRKDVEMRRMRLRLRFSS
        MDK VVELG+ERE QRRQEISALYM LR LLPL FIKVICG VHRGRDK+R                        R GS L RRKD+EMRR+ LRL FS 
Subjt:  MDKGVVELGKEREGQRRQEISALYMSLRTLLPLGFIKVICGIVHRGRDKRRSP----------------------RCGSLLLRRKDVEMRRMRLRLRFSS

Query:  CVV
        CV+
Subjt:  CVV

A0A5A7TTV0 Transcription factor bHLH36-like4.3e-0961.29Show/hide
Query:  MDKGVVELGKEREGQRRQEISALYMSLRTLLPLGFIKVICGIVHRGRDKRRSPRCGSLLLRR
        MDKGVVELG+ERE QRRQEISALYMSLRTLLPL FIKV         D++   + G  ++ R
Subjt:  MDKGVVELGKEREGQRRQEISALYMSLRTLLPLGFIKVICGIVHRGRDKRRSPRCGSLLLRR

A0A5A7VJK9 Retrotransposon protein7.1e-1264.18Show/hide
Query:  MDKGVVELGKEREGQRRQEISALYMSLRTLLPLGFIKVICGIVHRGRDKRRSPRCGSLLLRRKDVEM
        MDKGVV+L +ERE QRRQEI ALYM++RTLL L FIKVICGIVHR RDK R  +      ++KD E+
Subjt:  MDKGVVELGKEREGQRRQEISALYMSLRTLLPLGFIKVICGIVHRGRDKRRSPRCGSLLLRRKDVEM

A0A5D3BST2 CACTA en-spm transposon protein5.4e-0457.41Show/hide
Query:  GIVHRGRDKRRSPRCGSLLLRRKDVEMRRMRLRLRFSSCVVVAVCEERNFEEGK
        G +  G  +  SPR GS   RRKD+EMRRM LRL FSSCVVV V E    +EGK
Subjt:  GIVHRGRDKRRSPRCGSLLLRRKDVEMRRMRLRLRFSSCVVVAVCEERNFEEGK

A0A5D3E3K5 Transcription factor bHLH362.2e-1367.16Show/hide
Query:  MDKGVVELGKEREGQRRQEISALYMSLRTLLPLGFIKVICGIVHRGRDKRRSPRCGSLLLRRKDVEM
        MDKG+VELG+ERE QRRQEI ALYMSLRTLLPL FIKVI G +HRGRDK R  +      ++KD E+
Subjt:  MDKGVVELGKEREGQRRQEISALYMSLRTLLPLGFIKVICGIVHRGRDKRRSPRCGSLLLRRKDVEM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G51780.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein9.2e-0467.86Show/hide
Query:  KEREGQRRQEISALYMSLRTLLPLGFIK
        +E E QRRQE+++LY SLR+LLPL FIK
Subjt:  KEREGQRRQEISALYMSLRTLLPLGFIK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACAAAGGCGTTGTTGAGTTAGGGAAAGAAAGGGAGGGACAAAGAAGACAAGAAATCAGTGCTCTTTATATGTCTCTAAGAACCTTACTTCCTCTTGGATTTATCAA
GGTAATTTGTGGGATTGTGCATAGGGGAAGAGATAAACGGAGGTCTCCTCGCTGCGGGTCTCTGTTGTTGAGAAGAAAGGACGTGGAGATGAGAAGAATGAGGTTAAGGT
TGAGGTTTTCATCGTGCGTCGTTGTCGCCGTTTGTGAGGAGAGGAATTTTGAAGAAGGAAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGACAAAGGCGTTGTTGAGTTAGGGAAAGAAAGGGAGGGACAAAGAAGACAAGAAATCAGTGCTCTTTATATGTCTCTAAGAACCTTACTTCCTCTTGGATTTATCAA
GGTAATTTGTGGGATTGTGCATAGGGGAAGAGATAAACGGAGGTCTCCTCGCTGCGGGTCTCTGTTGTTGAGAAGAAAGGACGTGGAGATGAGAAGAATGAGGTTAAGGT
TGAGGTTTTCATCGTGCGTCGTTGTCGCCGTTTGTGAGGAGAGGAATTTTGAAGAAGGAAAGTGA
Protein sequenceShow/hide protein sequence
MDKGVVELGKEREGQRRQEISALYMSLRTLLPLGFIKVICGIVHRGRDKRRSPRCGSLLLRRKDVEMRRMRLRLRFSSCVVVAVCEERNFEEGK